CX286823

Overview
NameCX286823
Unique NameCX286823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length600
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14273 contig Ccv1_Contig14273:279..878. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: APG2_ARATH (GDSL esterase/lipase APG OS=Arabidopsis thaliana GN=APG PE=1 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 3.473e-78
Identity = 137/197 (69.54%), Postives = 169/197 (85.79%), Query Frame = 3
Query:    9 YAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPS 599
            Y PAYLSP+A+GKNLLIGANFASA SGYDD+ + LNHAI L QQ++Y++EY+SKL K+AGSK++ SIIK AI ++ +GS DF+QNYYVNPLL KVYT + Y S L++ FS+FIK +Y +GARK GVTSLPP GCLPAARTLFG+HE GCVSR+NTDAQ FNKK+++AA+ LQKQ  DLKIV+FDI+ P+YDLVQ+PS
Sbjct:   90 YPPAYLSPEASGKNLLIGANFASAASGYDDKAALLNHAIPLYQQVEYFKEYKSKLIKIAGSKKADSIIKGAICLLSAGSSDFVQNYYVNPLLYKVYTVDAYGSFLIDNFSTFIKQVYAVGARKIGVTSLPPTGCLPAARTLFGFHEKGCVSRLNTDAQNFNKKLNAAASKLQKQYSDLKIVVFDIYSPLYDLVQNPS 286          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GDL78_ARATH (GDSL esterase/lipase At5g22810 OS=Arabidopsis thaliana GN=At5g22810 PE=2 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 6.810e-58
Identity = 107/202 (52.97%), Postives = 152/202 (75.25%), Query Frame = 3
Query:    3 KTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSAS---IIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPS 599
            K+Y  AYLS +A GKNLLIGANFASA SGY D T+ L  AISL QQL++Y++Y S++ ++A S  +++   II + IYIV +GS DF+QNYY+NPLL +  +P+++S +L+  +SSFI+N+Y LGAR+ GVT+LPPLGCLPAA T+ G HE GC  ++N DA  FN K+++ + +L++ L  L +V+FDI++P+YDL   PS
Sbjct:   78 KSYPQAYLSKKAKGKNLLIGANFASAASGYYDGTAKLYSAISLPQQLEHYKDYISRIQEIATSNNNSNASAIISNGIYIVSAGSSDFIQNYYINPLLYRDQSPDEFSDLLILSYSSFIQNLYSLGARRIGVTTLPPLGCLPAAITVVGPHEGGCSEKLNNDAISFNNKLNTTSQDLKRNLIGLNLVVFDIYQPLYDLATRPS 279          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GDL73_ARATH (GDSL esterase/lipase At5g03820 OS=Arabidopsis thaliana GN=At5g03820 PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.981e-57
Identity = 102/199 (51.26%), Postives = 147/199 (73.87%), Query Frame = 3
Query:    6 TYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGY--HESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSP 596
            +Y   YLS +A G NLL GANFAS  SGYDD T+   +AI+L QQL+ Y+EYQ+K+  + GS+++  I   AI+++ +GS DFLQ+YY+NP+LN+++TP+QYS  L+  +S+F++N+Y LGARK GVT+LPPLGCLPAA TLFG   + + CV R+N DA  FN K+++ + NL   LP LK+V+FDI+ P+ ++  +P
Sbjct:   89 SYPVPYLSQEANGTNLLTGANFASGASGYDDGTAIFYNAITLNQQLKNYKEYQNKVTNIVGSERANKIFSGAIHLLSTGSSDFLQSYYINPILNRIFTPDQYSDRLMKPYSTFVQNLYDLGARKIGVTTLPPLGCLPAAITLFGETGNNNTCVERLNQDAVSFNTKLNNTSMNLTNNLPGLKLVVFDIYNPLLNMAMNP 287          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GDL72_ARATH (GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana GN=At5g03810 PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 9.834e-57
Identity = 101/198 (51.01%), Postives = 148/198 (74.75%), Query Frame = 3
Query:    6 TYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLF-GYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSP 596
            +Y  AYLS +A   NLL GANFAS  SG+DD T+   +AI+L+QQL+ Y+EYQ+K+  + G +++  I   AI+++ +GS DFLQ+YY+NP+LN+++TP+QYS  L+  +S+F++N+YGLGAR+ GVT+LPPLGCLPAA TLF G   + CV R+N DA  FN K+++ + NL   LP LK+V+FDI+ P+ ++V +P
Sbjct:   89 SYPVAYLSQEANETNLLTGANFASGASGFDDATAIFYNAITLSQQLKNYKEYQNKVTNIVGKERANEIFSGAIHLLSTGSSDFLQSYYINPILNRIFTPDQYSDHLLRSYSTFVQNLYGLGARRIGVTTLPPLGCLPAAITLFGGVGNNMCVERLNQDAVSFNTKLNNTSINLTNNLPGLKLVVFDIYNPLLNMVINP 286          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GDL59_ARATH (GDSL esterase/lipase At3g53100 OS=Arabidopsis thaliana GN=At3g53100 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 4.276e-52
Identity = 96/198 (48.48%), Postives = 139/198 (70.20%), Query Frame = 3
Query:    6 TYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPS 599
            +Y PA+LS +A+ +N+LIGANFASA SGY D TS    +ISLT+QL YYR YQ+++ ++ G   +  +    I+I+ +GS DFLQNYY+NPLLN + TP+Q++ +L+  FS FI+N+Y LGAR+ GV SLPP+GCLPAA TLFG     CV R+N DA  FN K+ +    L  +   L++V F++++P  D++ +P+
Sbjct:   88 SYPPAFLSREASNENILIGANFASASSGYYDATSVPFGSISLTRQLSYYRAYQNRVTRMIGRGNARILFSRGIHILSAGSSDFLQNYYINPLLNILNTPDQFADILLRSFSEFIQNLYELGARRIGVISLPPMGCLPAAITLFGAGNKSCVERLNNDAIMFNTKLENTTRLLMNRHSGLRLVAFNVYQPFLDIITNPT 285          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GDL90_ARATH (GDSL esterase/lipase At5g42170 OS=Arabidopsis thaliana GN=At5g42160/At5g42170 PE=3 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 1.928e-36
Identity = 74/194 (38.14%), Postives = 120/194 (61.86%), Query Frame = 3
Query:   15 PAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSP 596
            PAYL+P+   ++LL G NFAS GSGYD  T+ L   +SL+ QL+ ++EY++KL  + G +++  ++K+++Y+V + S D    Y    +    Y    Y+  L +  S F+  +YGLGAR+ GV S  P+GC+PAARTL G  +  C  ++N  A+ FN K+S     L K+LPD ++V+ D+   + D++++P
Sbjct:  112 PAYLNPKLKNEDLLKGVNFASGGSGYDPLTAKLVKVVSLSDQLKNFQEYKNKLKVIVGEEKANFLVKNSLYLVVASSNDIAHTYTARSIK---YNKTSYADYLADSASKFVSALYGLGARRIGVFSAVPVGCVPAARTLRGKLKRRCSEKLNEVARNFNAKISPTLEALGKELPDSRVVLIDVCDTLNDMIENP 302          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GDL34_ARATH (GDSL esterase/lipase At2g04570 OS=Arabidopsis thaliana GN=At2g04570 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 8.101e-35
Identity = 72/199 (36.18%), Postives = 108/199 (54.27%), Query Frame = 3
Query:    3 KTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPS 599
            K   PAYL P     +   G  FASA +GYD+ TS +   + L +QL+YY+EYQ+KL    G  +    I+ ++Y++  G+ DFL+NY+  P  +  Y+   Y   L  I   F+K ++GLGARK  +  LPP+GC+P  R         CV R N  A QFN K+      L K+LP   +V  + ++P   ++++PS
Sbjct:   86 KPIIPAYLDPSYNISDFATGVTFASAATGYDNATSDVLSVLPLWKQLEYYKEYQTKLKAYQGKDRGTETIESSLYLISIGTNDFLENYFAFPGRSSQYSVSLYQDFLAGIAKEFVKKLHGLGARKISLGGLPPMGCMPLERATNIGTGGECVGRYNDIAVQFNSKLDKMVEKLSKELPGSNLVFSNPYEPFMRIIKNPS 284          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: EXL3_ARATH (GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana GN=EXL3 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.251e-34
Identity = 71/199 (35.68%), Postives = 113/199 (56.78%), Query Frame = 3
Query:    3 KTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPS 599
            K+  PAYL P    K+LL G +FAS GSGYD  T  L   ISL  QL Y+ EY  K+  + G  +   I+ ++++++ +GS D    YY      + Y  + Y++++ +  S F+  +YG G R+  V   PP+GC+P+ RTL G     C    N  A+ FN K+S    +L+K LP +K +  +I+ P++D++Q+P+
Sbjct:  101 KSIVPAYLDPNLKSKDLLTGVSFASGGSGYDPITPKLVAVISLEDQLSYFEEYIEKVKNIVGEARKDFIVANSLFLLVAGSDDIANTYYTLRARPE-YDVDSYTTLMSDSASEFVTKLYGYGVRRVAVFGAPPIGCVPSQRTLGGGILRDCADNYNEAAKLFNSKLSPKLDSLRKTLPGIKPIYINIYDPLFDIIQNPA 298          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GDL48_ARATH (GDSL esterase/lipase At2g42990 OS=Arabidopsis thaliana GN=At2g42990 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 7.582e-33
Identity = 72/199 (36.18%), Postives = 111/199 (55.78%), Query Frame = 3
Query:    3 KTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSASIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSPS 599
            K   PAYL P     +   G  FASAG+GYD+ T+ +   I L ++++Y++EYQS L+   G +++A II++++YIV  G+ DFL+NYY  P     ++  QY   LV I   F+K++Y LGARK   T + P+GCLP  R         C    N  A  FN ++    T L ++L  +KI   + +  ++D+V  P+
Sbjct:   86 KPTVPAYLDPSYNISDFATGVCFASAGTGYDNSTADVLGVIPLWKEVEYFKEYQSNLSAYLGHRRAAKIIRESLYIVSIGTNDFLENYYTLPDRRSQFSISQYQDFLVEIAEVFLKDIYRLGARKMSFTGISPMGCLPLERVTNLDDPFSCARSYNDLAVDFNGRLRRLVTKLNRELTGIKIYFANPYDIMWDIVTKPN 284          
BLAST of CX286823 vs. ExPASy Swiss-Prot
Match: GDL89_ARATH (GDSL esterase/lipase At5g63170 OS=Arabidopsis thaliana GN=At5g63170 PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 9.903e-33
Identity = 71/199 (35.68%), Postives = 111/199 (55.78%), Query Frame = 3
Query:    3 KTYAPAYLSPQATGKNLLIGANFASAGSGYDDRTSYLNHAISLTQQLQYYREYQSKLAKVAGSKQSA-SIIKDAIYIVGSGSGDFLQNYYVNPLLNKVYTPEQYSSMLVNIFSSFIKNMYGLGARKFGVTSLPPLGCLPAARTLFGYHESGCVSRINTDAQQFNKKVSSAATNLQKQLPDLKIVIFDIFKPIYDLVQSP 596
            K   PAY SP     ++L G +FAS GSG D  T+ +   I +  QL  ++ Y +KL  + G ++   SII +A++++ +G+ D    Y+ NP+ N  YT   Y+ ++V+   SFIK +Y LGARKF +    PLGCLP A    G     C+   N  A+ FN+K++    NL   LP  + +  D++ P+ +LV++P
Sbjct:   86 KNIVPAYRSPFLEPNDILTGVSFASGGSGLDPMTARIQGVIWVPDQLNDFKAYIAKLNSITGDEEKTRSIISNAVFVISAGNNDIAITYFTNPIRNTRYTIFSYTDLMVSWTQSFIKELYNLGARKFAIMGTLPLGCLPGASNALG---GLCLEPANAVARLFNRKLADEVNNLNSMLPGSRSIYVDMYNPLLELVKNP 281          
The following BLAST results are available for this feature:
BLAST of CX286823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
APG2_ARATH3.473e-7869.54GDSL esterase/lipase APG OS=Arabidopsis thaliana G... [more]
GDL78_ARATH6.810e-5852.97GDSL esterase/lipase At5g22810 OS=Arabidopsis thal... [more]
GDL73_ARATH1.981e-5751.26GDSL esterase/lipase At5g03820 OS=Arabidopsis thal... [more]
GDL72_ARATH9.834e-5751.01GDSL esterase/lipase At5g03810 OS=Arabidopsis thal... [more]
GDL59_ARATH4.276e-5248.48GDSL esterase/lipase At3g53100 OS=Arabidopsis thal... [more]
GDL90_ARATH1.928e-3638.14GDSL esterase/lipase At5g42170 OS=Arabidopsis thal... [more]
GDL34_ARATH8.101e-3536.18GDSL esterase/lipase At2g04570 OS=Arabidopsis thal... [more]
EXL3_ARATH5.251e-3435.68GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana ... [more]
GDL48_ARATH7.582e-3336.18GDSL esterase/lipase At2g42990 OS=Arabidopsis thal... [more]
GDL89_ARATH9.903e-3335.68GDSL esterase/lipase At5g63170 OS=Arabidopsis thal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC01001D12Rv Veg1 Citrus clementina cDNA clone C01001D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286823 ID=CX286823; Name=CX286823; organism=Citrus clementina; type=EST; length=600bp
TTAAGACTTATGCGCCAGCATATCTCAGCCCACAGGCTACAGGGAAAAAC
CTCCTTATTGGAGCCAACTTTGCTTCAGCGGGATCTGGTTATGATGACAG
GACATCCTACTTAAATCATGCAATTTCATTGACTCAGCAGTTGCAGTACT
ATAGAGAGTACCAGAGTAAGCTAGCAAAGGTAGCCGGTAGCAAACAATCA
GCTTCCATAATCAAGGATGCGATATACATAGTGGGTTCTGGGAGTGGTGA
CTTTCTTCAGAATTACTATGTCAATCCTTTACTTAACAAAGTCTACACTC
CTGAGCAGTATAGCTCAATGCTTGTCAATATTTTCTCAAGTTTTATTAAG
AACATGTATGGATTGGGGGCAAGAAAATTTGGAGTGACTTCACTGCCACC
ATTGGGTTGCCTTCCAGCAGCAAGAACTTTATTTGGATATCACGAGAGCG
GCTGTGTCTCTAGAATCAATACTGATGCTCAACAATTTAACAAGAAGGTC
AGCTCCGCAGCAACAAATCTTCAAAAGCAACTTCCTGATCTGAAAATTGT
GATTTTCGACATTTTCAAGCCAATCTATGACCTTGTCCAGTCCCCTTCAA
back to top