CX286850
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX286850 vs. ExPASy Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 3.794e-42 Identity = 81/129 (62.79%), Postives = 99/129 (76.74%), Query Frame = 1 Query: 79 MPEKITAENILDNLVETISDKVQKQKXXXXXXXXXXXXXXXRFNRLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVPR 465 MP+K E+++ +LV+ ++ VQK K RFNRLF RQKP+HH+LGGGKSADVLLWRNKKISASVLMGATAIWVLFEW+N+HFL++VC+AL+LGM+AQF W N SG NRS S+VPR Sbjct: 1 MPDKNIVEDVIGDLVDNFTETVQKNKHGSSFFEQEDSVSS-RFNRLFDRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPR 128
BLAST of CX286850 vs. ExPASy Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 8.787e-23 Identity = 49/84 (58.33%), Postives = 61/84 (72.62%), Query Frame = 1 Query: 211 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVP 462 RLFGR+KPVH +LGGG ADV LWR+KK+SASVL ATAIWVLFE + YHFL++VC L+ + A F N N++P K+P Sbjct: 51 RLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIP 134
BLAST of CX286850 vs. ExPASy Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.499e-22 Identity = 43/84 (51.19%), Postives = 61/84 (72.62%), Query Frame = 1 Query: 211 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVP 462 RLFGR++PVH +LGGGK AD+ +W+NKK+S VL GATA WV+FE + YH LT++C +++ + F W N + N+SP K+P Sbjct: 72 RLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIP 155
BLAST of CX286850 vs. ExPASy Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.827e-21 Identity = 40/84 (47.62%), Postives = 59/84 (70.24%), Query Frame = 1 Query: 211 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVP 462 RLFGR++PVH +LGGGK AD+ +W++KK+S V GAT WVLFE + YH LT++C +++ + F W N + ++SP K+P Sbjct: 68 RLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIP 151
BLAST of CX286850 vs. ExPASy Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 8.224e-21 Identity = 44/84 (52.38%), Postives = 60/84 (71.43%), Query Frame = 1 Query: 211 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVP 462 R+FGR+KPVH +LGGGK ADV LWR+KK+S +VL ATAIWVLFE + YH L+++C +L + F W N L N++ ++P Sbjct: 51 RMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIP 134
BLAST of CX286850 vs. ExPASy Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.962e-20 Identity = 49/126 (38.89%), Postives = 64/126 (50.79%), Query Frame = 1 Query: 100 ENILDNLVETI-----SDKVQKQKXXXXXXXXXXXXXXXRFNRLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVP 462 E+IL+ +VE I S + + RLFGR+KPVH +LGGGK AD+ LWRNKK+S VL TA WVLFE YH L +C + + A F W N ++S +P Sbjct: 9 ESILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIP 134
BLAST of CX286850 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.925e-18 Identity = 40/84 (47.62%), Postives = 54/84 (64.29%), Query Frame = 1 Query: 211 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVP 462 RLFGR++P+H L GGGK AD+ LWRNKK+S VL AT W+LFE L Y+ LT+ +L + F W + S ++SP +P Sbjct: 47 RLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIP 130
BLAST of CX286850 vs. ExPASy Swiss-Prot
Match: RTNLI_ARATH (Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.027e-15 Identity = 34/84 (40.48%), Postives = 53/84 (63.10%), Query Frame = 1 Query: 211 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVP 462 +LF RQ+ +H + GGGK AD+LLWR KI+A++++G + +W L E + Y+F+T++C A + ML F W S N +P Sbjct: 22 KLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIP 105
BLAST of CX286850 vs. ExPASy Swiss-Prot
Match: RTNLG_ARATH (Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 3.027e-15 Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 1 Query: 211 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKV 459 R+FGR++P+H +LGGGK ADVLLWR+KK++ +L T IW+LF + LT +C +L +L F W S N+SP + Sbjct: 53 RMFGRERPIHMVLGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGSILFLLLSFLW---SNALNKSPENM 132
BLAST of CX286850 vs. ExPASy Swiss-Prot
Match: RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.030e-11 Identity = 31/84 (36.90%), Postives = 50/84 (59.52%), Query Frame = 1 Query: 211 RLFGRQKPVHHLLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWLNYHFLTIVCFALVLGMLAQFFWVNISGLFNRSPSKVP 462 RL GRQ VH +GGGK+AD+LLWR + +S V++ +T W++FE+ FL++ L++ ++ F +S NR +P Sbjct: 24 RLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLP 107 The following BLAST results are available for this feature:
BLAST of CX286850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286850 ID=CX286850; Name=CX286850; organism=Citrus clementina; type=EST; length=466bpback to top |