CX286866

Overview
NameCX286866
Unique NameCX286866
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length518
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig8968 contig Ccv1_Contig8968:220..737. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX286866 vs. ExPASy Swiss-Prot
Match: DNAJ_CARHZ (Chaperone protein dnaJ OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.024e-11
Identity = 32/64 (50.00%), Postives = 41/64 (64.06%), Query Frame = 2 
Query:  239 DYYAVLGLLPDATPEQIKKAYYNCMKACHPDLSGDDPETTNFCMFINEVYAVLSDPVQRMVYDE 430
            DYY +LG+  +ATPE+IKKAY    +  HPD++ DDP        INE Y VLSDP +R  YD+
Sbjct:    4 DYYEILGVARNATPEEIKKAYRKLARKYHPDVNKDDPNAAEKFKEINEAYEVLSDPEKRARYDQ 67
The following BLAST results are available for this feature:
BLAST of CX286866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DNAJ_CARHZ2.024e-1150.00Chaperone protein dnaJ OS=Carboxydothermus hydroge... [more]
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Properties
Property NameValue
Genbank descriptionC01002A01Rv Veg1 Citrus clementina cDNA clone C01002A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286866 ID=CX286866; Name=CX286866; organism=Citrus clementina; type=EST; length=518bp
CACGAGGCCTCGTGCCGATTGAACAACAATGGCTGCTCAGTTACTCACTC
CTGTTTGCATTGATGTTCTCAAACTTCAAAACCCATCATTGAATAGTTTC
AGCTCAAGAAGTTCATCGCGCTTGCTGGCTAATAACAGTAGCAGTTTGAG
CTTGATGGGTCACAGTAGCAAGAGAAGAAGCTGTGGCAGAGCGAGGGTTA
CCGCAGAGGACTCTGCTTCAACGGATGCCATTGCTGATGACTACTATGCT
GTTTTGGGATTGCTTCCGGATGCTACACCAGAGCAGATCAAGAAAGCTTA
CTATAATTGCATGAAAGCATGCCATCCCGATTTAAGTGGCGATGATCCGG
AGACCACAAATTTCTGCATGTTCATTAATGAGGTTTATGCGGTTCTCAGT
GACCCGGTGCAGCGGATGGTTTATGATGAAATTCACGGTTATTCATTGAT
TGCAACCAATCCTTTCTTGGACGATTCCTGCCCCAAGGATCATGTGTTTG
TTGATGAGTTTAGTTGCA
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