CX286867
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX286867 vs. ExPASy Swiss-Prot
Match: SEC13_RAT (Protein SEC13 homolog OS=Rattus norvegicus GN=Sec13 PE=1 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 5.076e-52 Identity = 100/195 (51.28%), Postives = 132/195 (67.69%), Query Frame = 3 Query: 3 SDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGGCDNTVKVWK-LYNGIWKMDCFSALQMHTDWVRNVAWAPNL 575 SD S+KI V N +A L GH+G VW+VAWAHP +G+ILASCS+D VIIWKE N W K H H SSVNS+ WAPH+ GL LACGSSDG IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ SG + ++K SGGCDN +K+W+ +G WK + L+ H+DWVR+VAWAP++ Sbjct: 33 SDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGT-WEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSI 224
BLAST of CX286867 vs. ExPASy Swiss-Prot
Match: SEC13_MOUSE (Protein SEC13 homolog OS=Mus musculus GN=Sec13 PE=2 SV=3) HSP 1 Score: 203.756 bits (517), Expect = 5.076e-52 Identity = 100/195 (51.28%), Postives = 132/195 (67.69%), Query Frame = 3 Query: 3 SDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGGCDNTVKVWK-LYNGIWKMDCFSALQMHTDWVRNVAWAPNL 575 SD S+KI V N +A L GH+G VW+VAWAHP +G+ILASCS+D VIIWKE N W K H H SSVNS+ WAPH+ GL LACGSSDG IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ SG + ++K SGGCDN +K+W+ +G WK + L+ H+DWVR+VAWAP++ Sbjct: 33 SDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGT-WEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSI 224
BLAST of CX286867 vs. ExPASy Swiss-Prot
Match: SEC13_HUMAN (Protein SEC13 homolog OS=Homo sapiens GN=SEC13 PE=1 SV=3) HSP 1 Score: 202.601 bits (514), Expect = 1.131e-51 Identity = 99/195 (50.77%), Postives = 132/195 (67.69%), Query Frame = 3 Query: 3 SDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGGCDNTVKVWK-LYNGIWKMDCFSALQMHTDWVRNVAWAPNL 575 SD S+KI V N +A L GH+G VW+VAWAHP +G+ILASCS+D VIIW+E N W K H H SSVNS+ WAPH+ GL LACGSSDG IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ SG + +++ SGGCDN +K+WK +G WK + L+ H+DWVR+VAWAP++ Sbjct: 33 SDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT-WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSI 224
BLAST of CX286867 vs. ExPASy Swiss-Prot
Match: SEC13_BOVIN (Protein SEC13 homolog OS=Bos taurus GN=SEC13 PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 1.929e-51 Identity = 101/195 (51.79%), Postives = 131/195 (67.18%), Query Frame = 3 Query: 3 SDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGGCDNTVKVWK-LYNGIWKMDCFSALQMHTDWVRNVAWAPNL 575 SD S+KI V N +A L GH+G VW+VAWAHP +G+ILASCS+D VIIWKE N W K H H SSVNS+ WAPH+ GL LACGSSDG IS+ T G W+ +I+ AH +G +VSWAP+ PG+L+ SG + ++K SGGCDN +K+WK +G WK + L+ H+DWVR+VAWAP++ Sbjct: 33 SDRSVKIFDVRNGGQILVADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGT-WEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSI 224
BLAST of CX286867 vs. ExPASy Swiss-Prot
Match: SEC13_DICDI (Protein transport protein SEC13 OS=Dictyostelium discoideum GN=sec13 PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 4.022e-49 Identity = 93/194 (47.94%), Postives = 123/194 (63.40%), Query Frame = 3 Query: 3 SDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSG---FLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFSALQMHTDWVRNVAWAPNL 575 SD IKI VG QHL L GH+G VW+VAWAHPKFG ILAS S+D VI+WKE +N W H + H+ SVNSI WAPHE GL LAC SSDG++++ + W+ + Q +GV SVSW+P+ P +LV S P++++ +G CDN +K++K W +D L+ H DWVR+VAWAPN+ Sbjct: 31 SDKMIKIFDVGGENPQHLVDLRGHEGPVWQVAWAHPKFGKILASASYDRKVIVWKEVGNNSWSIIHQYAGHELSVNSISWAPHEFGLSLACASSDGSVTIHNYN-NNVWEAPQKIQVSQIGVNSVSWSPAAIPTSLVNSANTIIPAPIKRIVTGSCDNLIKIFKNVEDKWILD--KQLEDHKDWVRDVAWAPNI 221
BLAST of CX286867 vs. ExPASy Swiss-Prot
Match: SEC13_USTMA (Protein transport protein SEC13 OS=Ustilago maydis GN=SEC13 PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 4.162e-46 Identity = 100/229 (43.67%), Postives = 130/229 (56.77%), Query Frame = 3 Query: 3 SDYSIKIIGVGNNTSQHLAK-LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE-----------------------GNSNEW--IKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV------------GSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFSALQMHTDWVRNVAWAPNL 575 SD ++K+ + N T A+ L GH+G VW+VAWAHP FG ILASCS+DG V+IWK+ ++ W IK+H H +SVNSI WAPHELG LAC SSDGN+SV T DG W + AHPVG +VSWAP+ PG+L+ +G V++ S GCDNTVK+W+ + ALQ H+DWVR+VA+APN+ Sbjct: 46 SDRTVKVFDIVNGTPSTTAETLHGHQGPVWQVAWAHPTFGDILASCSYDGKVVIWKDNGAGASIGASAPYGSQSAYGAPTSSAGGWTKIKEHTL--HTASVNSISWAPHELGSILACASSDGNVSVLTFNNDGTWAVDLV-AAHPVGCNAVSWAPAVVPGSLISAQSVGANAGAASNGEAKLVKRFASAGCDNTVKIWEFSQEANRFVEVEALQGHSDWVRDVAFAPNV 271
BLAST of CX286867 vs. ExPASy Swiss-Prot
Match: SEC13_SCHPO (Protein transport protein sec13 OS=Schizosaccharomyces pombe GN=sec13 PE=1 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 5.088e-44 Identity = 88/192 (45.83%), Postives = 116/192 (60.42%), Query Frame = 3 Query: 3 SDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE-GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFSALQMHTDWVRNVAWAPNL 575 SD +IK+ + NN L L GH G VW++ WAHPKFG+ILAS S+DG VI+W+E G + DH H++SVN++ WAPHE G LAC SSDG +SV + DG DT RI AH G +V W+P + G++VG +KL + GCDN VK+W G+ L H DW R+VAWAP++ Sbjct: 29 SDQTIKVFSIENNQQTLLETLRGHSGPVWQLGWAHPKFGTILASASYDGHVIVWRETGGVWSELMDHT--AHQASVNAVSWAPHEYGALLACASSDGKVSVLEFKDDGSCDT-RIFTAHEPGCNAVCWSPPSLSGSVVGQSPAAGPKKLATAGCDNLVKIWAFDAGVNNWILEDTLAGHVDWTRDVAWAPSV 217
BLAST of CX286867 vs. ExPASy Swiss-Prot
Match: SEC13_COCIM (Protein transport protein SEC13 OS=Coccidioides immitis GN=SEC13 PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.480e-43 Identity = 93/198 (46.97%), Postives = 129/198 (65.15%), Query Frame = 3 Query: 3 SDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNS-----NEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV-GSGFLDPVQKLCSGGCDNTVKVWKLYNGIWKMDCFS-ALQMHTDWVRNVAWAPNL 575 SD +IKI + ++ + + L GH+GAVW VAWAHPKFG+ILAS S+DG V+IW+E +S + W + F H +SVN + WAPHELG LAC SSDG++SV R D W T +I AH +GV SVSWAP+ APG+++ + +++ +GG DN VK+W YN K S L+ HT WVR+V+W+P++ Sbjct: 31 SDKTIKIFELEGDSHRLIETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQSSAASTGSSWSRVFDFSLHTASVNMVSWAPHELGCVLACASSDGHVSVLEFR-DNSW-THQIFHAHGMGVNSVSWAPAAAPGSVISATPSTGQIRRFVTGGSDNLVKIWD-YNPETKTYATSHVLEGHTGWVRDVSWSPSI 225
BLAST of CX286867 vs. ExPASy Swiss-Prot
Match: SEC13_ASPNC (Protein transport protein sec13 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sec13 PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.480e-43 Identity = 93/201 (46.27%), Postives = 124/201 (61.69%), Query Frame = 3 Query: 3 SDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSN--------EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQ--KLCSGGCDNTVKVWKLYNGIWKMDCFSALQMHTDWVRNVAWAPNL 575 SD +IKI + T + + L GH+GAVW VAWAHPKFG+ILAS S+DG V+IW+E + N W K F H +SVN + WAPHE G LAC SSDG++SV R D W T +I AH +GV S+SWAP+ APG+L+ S P Q + +GG DN +K+W + L+ H+DWVR+VAW+P++ Sbjct: 32 SDKTIKIFEIEGETHRLIETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQHQNATSPVAGGAWTKVFDFSLHTASVNMVSWAPHESGCLLACASSDGHVSVLEFR-DNSW-THQIFHAHGMGVNSISWAPAAAPGSLISSN-PGPGQQRRFVTGGSDNLLKIWDYNPETKTYNNTQTLEGHSDWVRDVAWSPSV 229
BLAST of CX286867 vs. ExPASy Swiss-Prot
Match: SEC13_ASPFU (Protein transport protein sec13 OS=Aspergillus fumigatus GN=sec13 PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 1.934e-43 Identity = 92/201 (45.77%), Postives = 124/201 (61.69%), Query Frame = 3 Query: 3 SDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSN--------EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQ--KLCSGGCDNTVKVWKLYNGIWKMDCFSALQMHTDWVRNVAWAPNL 575 SD +IKI + T + + L GH+GAVW VAWAHPKFG+ILAS S+DG V+IW+E + N W K F H +SVN + WAPHE G LAC SSDG++SV R D W T +I AH +GV S+SWAP+ +PG+L+ S P Q + +GG DN +K+W + L+ H+DWVR+VAW+P++ Sbjct: 30 SDKTIKIFEIEGETHRLIETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQHQNATSPVAGSTWTKVFDFSLHTASVNMVSWAPHESGCLLACASSDGHVSVLEFR-DNSW-THQIFHAHGMGVNSISWAPAASPGSLISSN-PGPGQQRRFVTGGSDNLLKIWDYNPESKTYNLSQTLEGHSDWVRDVAWSPSI 227 The following BLAST results are available for this feature:
BLAST of CX286867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286867 ID=CX286867; Name=CX286867; organism=Citrus clementina; type=EST; length=575bpback to top |