CX286869

Overview
NameCX286869
Unique NameCX286869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length536
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5890 contig Ccv1_Contig5890:495..1030. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX286869 vs. ExPASy Swiss-Prot
Match: E13B_PRUPE (Glucan endo-1,3-beta-glucosidase, basic isoform OS=Prunus persica GN=GNS1 PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 2.948e-64
Identity = 126/176 (71.59%), Postives = 146/176 (82.95%), Query Frame = 2
Query:   11 DVVALYNQNNIRRMRLYDPNIEALEALRGSNIEVMLGLPNENLQRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFARYLVPAMRNIQNAINGAGLGNQIKVSTVIETGALDESFPPSRGSFKQDYRPILDPLIRFLNDNRSPLLVNLYPYFAIAGNRQ-ISLDYAL 535
            +VVALY  NNI RMRLYDPN  ALEALRGSNI+++LG+PNENLQ IA +QA AN WVQNNVRN+AN VKFKYIAVGNE KP D+FA++LVPAMRNIQ AI+ AGL  +IKVST I+TG L E+FPPS GSFK +Y  +L P+IRFL  ++SPLLVNLYPYFA +GN Q I LDYAL
Sbjct:   56 EVVALYKTNNIPRMRLYDPNPAALEALRGSNIKLLLGVPNENLQYIALSQANANAWVQNNVRNYAN-VKFKYIAVGNEVKPSDSFAQFLVPAMRNIQEAISLAGLAKKIKVSTAIDTGVLGETFPPSIGSFKSEYNALLYPIIRFLVSHQSPLLVNLYPYFAYSGNTQDIRLDYAL 230          
BLAST of CX286869 vs. ExPASy Swiss-Prot
Match: E13A_SOYBN (Glucan endo-1,3-beta-glucosidase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 6.146e-62
Identity = 115/178 (64.61%), Postives = 148/178 (83.15%), Query Frame = 2
Query:    8 RDVVALYNQNNIRRMRLYDPNIEALEALRGSNIEVMLGLPNENLQRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFARYLVPAMRNIQNAINGAGLGNQIKVSTVIETGALDESFPPSRGSFKQDYR-PILDPLIRFLNDNRSPLLVNLYPYFAIAGN-RQISLDYAL 535
            ++VVALYNQ NIRRMR+Y P+ E LEALRGSNIE++L +PN+NL+ +AS+Q  AN WVQ+N++N+ANNV+F+Y++VGNE KP  +FA++LVPA+ NIQ AI+ AGLGNQ+KVST I+TGAL ESFPPS+GSFK DYR   LD +IRFL +N +PL+VN+Y YFA   N + ISLDYAL
Sbjct:   49 QEVVALYNQANIRRMRIYGPSPEVLEALRGSNIELLLDIPNDNLRNLASSQDNANKWVQDNIKNYANNVRFRYVSVGNEVKPEHSFAQFLVPALENIQRAISNAGLGNQVKVSTAIDTGALAESFPPSKGSFKSDYRGAYLDGVIRFLVNNNAPLMVNVYSYFAYTANPKDISLDYAL 226          
BLAST of CX286869 vs. ExPASy Swiss-Prot
Match: E13H_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q' OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.186e-59
Identity = 116/181 (64.09%), Postives = 142/181 (78.45%), Query Frame = 2
Query:    2 SKRDVVALYNQNNIRRMRLYDPNIEALEALRGSNIEVMLGLPNENLQRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDNFARY---LVPAMRNIQNAINGAGLGNQIKVSTVIETGALDESFPPSRGSFKQDYRPILDPLIRFLNDNRSPLLVNLYPYFAIAGNRQISLDYAL 535
            S  DVV+L N+NNIRRMR+YDP+   LEALRGSNIE+MLG+PN +L+ +A++QA A+TWVQNNVRN+ N VKF+YIAVGNE  P +  ++Y   L+ AMRNIQ AI+GAGLGNQIKVST IETG   ++ PPS G FK D R  ++P+I FL  NR+PLLVNLYPYFAIA N  I L+YAL
Sbjct:   39 SPADVVSLCNRNNIRRMRIYDPDQPTLEALRGSNIELMLGVPNPDLENVAASQANADTWVQNNVRNYGN-VKFRYIAVGNEVSPLNENSKYVPVLLNAMRNIQTAISGAGLGNQIKVSTAIETGLTTDTSPPSNGRFKDDVRQFIEPIINFLVTNRAPLLVNLYPYFAIANNADIKLEYAL 218          
BLAST of CX286869 vs. ExPASy Swiss-Prot
Match: GUB_NICPL (Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3)

HSP 1 Score: 214.542 bits (545), Expect = 2.501e-55
Identity = 111/178 (62.36%), Postives = 132/178 (74.16%), Query Frame = 2
Query:   14 VVALYNQNNIRRMRLYDPNIEALEALRGSNIEVMLGLPNENLQRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKP---GDNFARYLVPAMRNIQNAINGAGLGNQIKVSTVIETGALDESFPPSRGSFKQDYRPILDPLIRFLNDNRSPLLVNLYPYFAIAGN-RQISLDYAL 535
            VV LY   NIRRMRLYDPN  AL+ALRGSNIEVMLG+PN +LQ IA+N + AN WVQ NVRNF   VKF+YIAVGNE  P     +  RYL+PAMRNI+NAI+ AGL N IKVS+ ++   +  SFPPS+GSF+ D R  +DP+I F+    SPLLVN+YPYF+ AGN R ISL YAL
Sbjct:   50 VVQLYKSKNIRRMRLYDPNQAALQALRGSNIEVMLGVPNSDLQNIAANPSNANNWVQRNVRNFWPAVKFRYIAVGNEVSPVTGTSSLTRYLLPAMRNIRNAISSAGLQNNIKVSSSVDMTLIGNSFPPSQGSFRNDVRSFIDPIIGFVRRINSPLLVNIYPYFSYAGNPRDISLPYAL 227          
BLAST of CX286869 vs. ExPASy Swiss-Prot
Match: E13B_SOLLC (Glucan endo-1,3-beta-glucosidase B OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 9.205e-50
Identity = 103/182 (56.59%), Postives = 127/182 (69.78%), Query Frame = 2
Query:    2 SKRDVVALYNQNNIRRMRLYDPNIEALEALRGSNIEVMLGLPNENLQRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKP---GDNFARYLVPAMRNIQNAINGAGLGNQIKVSTVIETGALDESFPPSRGSFKQDYRPILDPLIRFLNDNRSPLLVNLYPYFAIAGN-RQISLDYAL 535
            S  +V+ LY   NIRR+RLYDPN  AL ALRGSNIEV+LGLPN +++ I+S    A  WVQ NVR+F  +VK KYIAVGNE  P     N A + VPA+ NI  AI  AGLGN IKVST ++   +  S+PPS+GSF+ D R   DP++ FL D R+PLLVN+YPYF+ +GN  QISL YAL
Sbjct:   40 SHSEVIQLYKSRNIRRLRLYDPNHGALNALRGSNIEVILGLPNVDVKHISSGMEHARWWVQKNVRDFWPHVKIKYIAVGNEISPVTGTSNLAPFQVPALVNIYKAIGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYAL 221          
BLAST of CX286869 vs. ExPASy Swiss-Prot
Match: E13B_NICPL (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana plumbaginifolia GN=GN2 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.329e-48
Identity = 100/179 (55.87%), Postives = 128/179 (71.51%), Query Frame = 2
Query:   11 DVVALYNQNNIRRMRLYDPNIEALEALRGSNIEVMLGLPNENLQRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKP--GDNF-ARYLVPAMRNIQNAINGAGLGNQIKVSTVIETGALDESFPPSRGSFKQDYRPILDPLIRFLNDNRSPLLVNLYPYFAIAGN-RQISLDYAL 535
            +V+ LY   NI R+RLYDPN  AL+AL+GSNIEVMLGLPN +++ IAS    A  WVQ NV++F  +VK KYIAVGNE  P  G ++   +L PAM NI  AI  AGLGN IKVST ++   +  S+PPS+GSF+ D R  +DP++ FL D R+PLLVN+YPYF+ +GN  QISL Y+L
Sbjct:   51 EVIQLYKSRNIGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSFRNDARWFVDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSL 229          
BLAST of CX286869 vs. ExPASy Swiss-Prot
Match: E13F_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform GLB OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.267e-48
Identity = 100/179 (55.87%), Postives = 127/179 (70.95%), Query Frame = 2
Query:   11 DVVALYNQNNIRRMRLYDPNIEALEALRGSNIEVMLGLPNENLQRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKP--GDNF-ARYLVPAMRNIQNAINGAGLGNQIKVSTVIETGALDESFPPSRGSFKQDYRPILDPLIRFLNDNRSPLLVNLYPYFAIAGN-RQISLDYAL 535
            +V+ LY   NI R+RLYDPN  AL+AL+GSNIEVMLGLPN +++ IAS    A  WVQ NV++F  +VK KYIAVGNE  P  G ++   +L PAM NI  AI  AGLGN IKVST ++   +  S+PPS+GSF+ D R   DP++ FL D R+PLLVN+YPYF+ +GN  QISL Y+L
Sbjct:   51 EVIQLYKSRNIGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSFRNDARWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSL 229          
BLAST of CX286869 vs. ExPASy Swiss-Prot
Match: E13B_TOBAC (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Nicotiana tabacum PE=1 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 2.267e-48
Identity = 100/179 (55.87%), Postives = 127/179 (70.95%), Query Frame = 2
Query:   11 DVVALYNQNNIRRMRLYDPNIEALEALRGSNIEVMLGLPNENLQRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKP--GDNF-ARYLVPAMRNIQNAINGAGLGNQIKVSTVIETGALDESFPPSRGSFKQDYRPILDPLIRFLNDNRSPLLVNLYPYFAIAGN-RQISLDYAL 535
            +V+ LY   NI R+RLYDPN  AL+AL+GSNIEVMLGLPN +++ IAS    A  WVQ NV++F  +VK KYIAVGNE  P  G ++   +L PAM NI  AI  AGLGN IKVST ++   +  S+PPS+GSF+ D R   DP++ FL D R+PLLVN+YPYF+ +GN  QISL Y+L
Sbjct:   52 EVIQLYKSRNIGRLRLYDPNHGALQALKGSNIEVMLGLPNSDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSYLTSFLTPAMVNIYKAIGEAGLGNNIKVSTSVDMTLIGNSYPPSQGSFRNDARWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYSL 230          
BLAST of CX286869 vs. ExPASy Swiss-Prot
Match: E13B_HEVBR (Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform OS=Hevea brasiliensis GN=HGN1 PE=1 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 2.267e-48
Identity = 100/180 (55.56%), Postives = 131/180 (72.78%), Query Frame = 2
Query:   11 DVVALYNQNNIRRMRLYDPNIEALEALRGSNIEVMLGLPNENLQRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKPGDN----FARYLVPAMRNIQNAINGAGLGNQIKVSTVIETGALDESFPPSRGSFKQDYRPILDPLIRFLNDNRSPLLVNLYPYFAIAGN-RQISLDYAL 535
            +V+ALY ++NI RMR+YDPN   LEALRGSNIE++LG+PN +LQ + +N + A +WVQ NVR F ++V F+YIAVGNE  P +      A++++PAMRNI +AI  AGL +QIKVST I+   +  S+PPS G+F+ D R  LDP+I FL+  RSPLL N+YPYF  A N R ISL YAL
Sbjct:   54 EVIALYKKSNITRMRIYDPNRAVLEALRGSNIELILGVPNSDLQSL-TNPSNAKSWVQKNVRGFWSSVLFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAIRSAGLQDQIKVSTAIDLTLVGNSYPPSAGAFRDDVRSYLDPIIGFLSSIRSPLLANIYPYFTYAYNPRDISLPYAL 232          
BLAST of CX286869 vs. ExPASy Swiss-Prot
Match: E133_SOLTU (Glucan endo-1,3-beta-glucosidase, basic isoform 3 (Fragment) OS=Solanum tuberosum GN=GLUB3 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 5.051e-48
Identity = 100/182 (54.95%), Postives = 125/182 (68.68%), Query Frame = 2
Query:    2 SKRDVVALYNQNNIRRMRLYDPNIEALEALRGSNIEVMLGLPNENLQRIASNQAEANTWVQNNVRNFANNVKFKYIAVGNEAKP---GDNFARYLVPAMRNIQNAINGAGLGNQIKVSTVIETGALDESFPPSRGSFKQDYRPILDPLIRFLNDNRSPLLVNLYPYFAIAGN-RQISLDYAL 535
            S  +V+ LY   NI R+RLYDPN  AL ALRGSNIEV+LGLPN +++ IAS    A  WVQ NV++F  +VK KYIAVGNE  P     +   + VPA+ NI  AI  AGLGN IKVST ++   +  S+PPS+GSF+ D R   DP++ FL D R+PLLVN+YPYF+ +GN  QISL YAL
Sbjct:    5 SHSEVIQLYKSRNIGRLRLYDPNHGALNALRGSNIEVILGLPNVDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSSLTSFQVPALVNIYKAIGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYAL 186          
The following BLAST results are available for this feature:
BLAST of CX286869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
E13B_PRUPE2.948e-6471.59Glucan endo-1,3-beta-glucosidase, basic isoform OS... [more]
E13A_SOYBN6.146e-6264.61Glucan endo-1,3-beta-glucosidase OS=Glycine max PE... [more]
E13H_TOBAC2.186e-5964.09Glucan endo-1,3-beta-glucosidase, acidic isoform P... [more]
GUB_NICPL2.501e-5562.36Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2... [more]
E13B_SOLLC9.205e-5056.59Glucan endo-1,3-beta-glucosidase B OS=Solanum lyco... [more]
E13B_NICPL1.329e-4855.87Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13F_TOBAC2.267e-4855.87Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13B_TOBAC2.267e-4855.87Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E13B_HEVBR2.267e-4855.56Glucan endo-1,3-beta-glucosidase, basic vacuolar i... [more]
E133_SOLTU5.051e-4854.95Glucan endo-1,3-beta-glucosidase, basic isoform 3 ... [more]

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Properties
Property NameValue
Genbank descriptionC01002A05Rv Veg1 Citrus clementina cDNA clone C01002A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286869 ID=CX286869; Name=CX286869; organism=Citrus clementina; type=EST; length=536bp
ATCAAAACGAGATGTCGTAGCTCTCTACAACCAAAACAACATCAGAAGAA
TGAGACTCTATGATCCAAACATAGAGGCACTCGAAGCTCTCAGAGGCTCC
AACATTGAAGTCATGCTGGGCCTTCCCAACGAGAACCTCCAAAGAATCGC
TTCCAATCAAGCCGAAGCAAACACTTGGGTCCAAAACAACGTCCGAAATT
TTGCTAACAATGTCAAGTTCAAATACATTGCTGTAGGAAATGAAGCAAAA
CCTGGAGATAACTTCGCTCGGTACCTTGTTCCCGCCATGAGAAACATACA
AAACGCCATCAACGGAGCCGGCCTTGGAAACCAAATCAAGGTTTCCACTG
TTATCGAAACTGGAGCTCTTGACGAATCTTTCCCTCCGTCAAGAGGCTCA
TTTAAGCAAGATTACAGACCCATTCTTGATCCCCTCATTCGCTTCCTCAA
CGATAACAGATCCCCCTTGCTTGTCAACTTGTACCCTTACTTCGCAATTG
CTGGTAACCGCCAAATATCTCTGGATTATGCACTAT
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