CX286892

Overview
NameCX286892
Unique NameCX286892
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length577
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15457 contig Ccv1_Contig15457:102..678. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX286892 vs. ExPASy Swiss-Prot
Match: PAPS2_HUMAN (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 OS=Homo sapiens GN=PAPSS2 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 9.432e-30
Identity = 68/126 (53.97%), Postives = 87/126 (69.05%), Query Frame = 2
Query:  200 ELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGT 577
            EL V ++  D  + EA TLP + +TK+DLQWV VLSEGWA+PL GFMRE E+LQ +HF++L LDDG V+NMS+PIVL +  E K R+   ++  L       VAIL D E Y+H KEER +R WGT
Sbjct:  226 ELFVPENKLDHVRAEAETLPSLSITKLDLQWVQVLSEGWATPLKGFMREKEYLQVMHFDTL-LDDG-VINMSIPIVLPVSAEDKTRLEGCSKFVLAHGGRR-VAILRDAEFYEHRKEERCSRVWGT 348          
BLAST of CX286892 vs. ExPASy Swiss-Prot
Match: PAPS2_MOUSE (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 OS=Mus musculus GN=Papss2 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.323e-28
Identity = 76/184 (41.30%), Postives = 109/184 (59.24%), Query Frame = 2
Query:   41 KTPLPSRSLSKSNISHFAPPLTSLSFKQKTTAPHFKLRSIRAGLIEPDGGKLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLD-----DGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGT 577
            +TP      + S++S     +  L  +++   PH  ++ I             EL V ++  D  + EA TLP + +TK+DLQWV +LSEGWA+PL GFMRE E+LQTLHF++L LD     DG V+NMS+PIVL +  + K R+   ++ AL+  +   VA+L D E Y+H KEER +R WGT
Sbjct:  187 ETPECVLKTNLSSVSDCVQQVVEL-LQEQNIVPHTTIKGIH------------ELFVPENKVDQIRAEAETLPSLPITKLDLQWVQILSEGWATPLKGFMREKEYLQTLHFDTL-LDGVVPRDG-VINMSIPIVLPVSADDKARLEGCSKFALM-YEGRRVALLQDPEFYEHRKEERCSRVWGT 354          
BLAST of CX286892 vs. ExPASy Swiss-Prot
Match: PAPS1_HUMAN (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 OS=Homo sapiens GN=PAPSS1 PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 5.176e-28
Identity = 64/129 (49.61%), Postives = 88/129 (68.22%), Query Frame = 2
Query:  191 KLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGT 577
            ++ EL V ++   + K +A TLP +++ K+D+QWV VL+EGWA+PL+GFMRE E+LQ LHF+ L   DG V+N+SVPIVL    E K R+   T  AL+  +   VAIL + E ++H KEER AR WGT
Sbjct:  233 EVKELYVPENKLHLAKTDAETLPALKINKVDMQWVQVLAEGWATPLNGFMREREYLQCLHFDCLL--DGGVINLSVPIVLTATHEDKERLDGCTAFALM-YEGRRVAILRNPEFFEHRKEERCARQWGT 358          
BLAST of CX286892 vs. ExPASy Swiss-Prot
Match: PAPS1_CAVPO (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 OS=Cavia porcellus GN=PAPSS1 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.760e-28
Identity = 63/129 (48.84%), Postives = 88/129 (68.22%), Query Frame = 2
Query:  191 KLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGT 577
            ++ EL V ++   + K +A +LP +++ K+D+QWV VL+EGWA+PL GFMRE E+LQ LHF+ L   DG V+N+SVPIVL   +E K R+   T  AL+  +   VAIL + E ++H KEER AR WGT
Sbjct:  233 EVKELYVPENKLHLAKTDAESLPALQINKVDMQWVQVLAEGWATPLGGFMREREYLQCLHFDCLL--DGGVINLSVPIVLTATEEDKERLDGCTAFALI-YEGRRVAILRNPEFFEHRKEERCARQWGT 358          
BLAST of CX286892 vs. ExPASy Swiss-Prot
Match: PAPS1_MOUSE (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 OS=Mus musculus GN=Papss1 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.828e-28
Identity = 64/129 (49.61%), Postives = 87/129 (67.44%), Query Frame = 2
Query:  191 KLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGT 577
            ++ EL V ++   + K +A  LP +++ K+D+QWV VL+EGWA+PL+GFMRE E+LQ LHF+ L   DG V+N+SVPIVL    E K R+   T  ALV  +   VAIL + E ++H KEER AR WGT
Sbjct:  233 EVKELYVPENKLHLAKTDAEALPALKINKVDMQWVQVLAEGWATPLNGFMREREYLQCLHFDCLL--DGGVINLSVPIVLTATHEDKERLDGCTAFALV-YEGRRVAILRNPEFFEHRKEERCARQWGT 358          
BLAST of CX286892 vs. ExPASy Swiss-Prot
Match: PAPSS_URECA (Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase OS=Urechis caupo PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.922e-24
Identity = 61/126 (48.41%), Postives = 79/126 (62.70%), Query Frame = 2
Query:  200 ELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWGT 577
            EL V +S  +  K E   LP + +TK+D QWV VLSEGWA+PL+GFMRE E+LQ+ HF  L   DG V N S+PIVL +    K R+  S+  AL   +   +AIL   E Y+H KEER +R +GT
Sbjct:  221 ELFVPESGLEHAKAEIVDLPTMEITKLDTQWVQVLSEGWATPLTGFMREREYLQSQHFGCLL--DGGVTNQSIPIVLPVHTADKDRLEGSSAFAL-SYEGKRIAILRTPEFYEHRKEERCSRQFGT 343          
BLAST of CX286892 vs. ExPASy Swiss-Prot
Match: SATC1_SORC5 (Probable bifunctional SAT/APS kinase 1 OS=Sorangium cellulosum (strain So ce56) GN=sat1/cysC1 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.869e-12
Identity = 45/138 (32.61%), Postives = 66/138 (47.83%), Query Frame = 2
Query:  161 RAGLIEPDGGKLTELIVDKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQKRRIGESTRVALVDSDDNVVAILNDIEIYKHPKEERIARTWG 574
            RAGL  P GG+L +  V    R       A LPR+RL +     + ++  G  SPL GFM   ++L+ +     RL+ G V   S+PI LA+  E   R+   + VAL   D  VV +L  ++ +   KE      +G
Sbjct:  187 RAGLAPPHGGELVDRFVRGDARQRLLERVAGLPRVRLDERGASDLELIGNGAYSPLKGFMTSRDYLRVV--RERRLESGLV--WSIPITLAVPGEDAARLSLGSEVALASPDGRVVGVLELVDRWTPDKEVEARNVYG 320          
BLAST of CX286892 vs. ExPASy Swiss-Prot
Match: MET3_USTMA (Sulfate adenylyltransferase OS=Ustilago maydis GN=MET3 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.508e-11
Identity = 47/137 (34.31%), Postives = 77/137 (56.20%), Query Frame = 2
Query:  179 PDGGKLTELIV-DKSLRDVRKREAATLPRIRLTKIDLQWVHVLSEGWASPLSGFMRESEFLQTLHFNSLRLDDGSVVNMSVPIVLAIDDEQ--KRRIGESTRVALVD-SDDNVVAILNDIEIYKHPKEERIARTWGT 577
            P GG L +L+V D  +    ++EA TLP I LT+  L  + ++  G  SPL GFM ++++   L  +++RL DG++  M  PI L +D++Q    +I +  R+AL D  DDN +AI+   ++Y   K       +G+
Sbjct:    5 PHGGVLKDLLVRDAPIAAQLRQEADTLPEIVLTERQLCDLELIINGGFSPLQGFMNQTDYNGCL--DNMRLADGNLFPM--PITLDVDEQQIEALKIQQGARIALRDPRDDNAIAIITVTDVYAVDKVREATAVFGS 137          
The following BLAST results are available for this feature:
BLAST of CX286892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PAPS2_HUMAN9.432e-3053.97Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
PAPS2_MOUSE2.323e-2841.30Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
PAPS1_HUMAN5.176e-2849.61Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
PAPS1_CAVPO6.760e-2848.84Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
PAPS1_MOUSE8.828e-2849.61Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
PAPSS_URECA5.922e-2448.41Bifunctional 3'-phosphoadenosine 5'-phosphosulfate... [more]
SATC1_SORC58.869e-1232.61Probable bifunctional SAT/APS kinase 1 OS=Sorangiu... [more]
MET3_USTMA7.508e-1134.31Sulfate adenylyltransferase OS=Ustilago maydis GN=... [more]
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Properties
Property NameValue
Genbank descriptionC01002C06Rv Veg1 Citrus clementina cDNA clone C01002C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286892 ID=CX286892; Name=CX286892; organism=Citrus clementina; type=EST; length=577bp
AGTTCAATTAACAATGGCCACCATGTCCACTCTGTTCGCCAAAACCCCAC
TTCCCTCCCGATCCCTCTCCAAATCTAATATTTCCCATTTTGCTCCTCCC
CTCACATCCCTCTCCTTCAAGCAAAAGACCACCGCCCCCCATTTCAAGCT
CCGGAGTATCCGGGCCGGGCTGATCGAACCGGACGGCGGGAAGCTGACGG
AGCTGATCGTCGACAAGTCGTTGAGGGACGTTAGGAAGCGGGAGGCGGCG
ACGCTGCCGAGGATCAGGCTGACGAAGATTGACCTTCAATGGGTACACGT
GTTGAGCGAGGGTTGGGCCAGCCCTCTAAGCGGGTTCATGAGAGAATCCG
AGTTCCTCCAAACTCTTCATTTCAACTCGCTCCGTCTGGACGACGGGTCG
GTTGTTAACATGTCCGTGCCGATCGTCTTGGCGATCGACGACGAGCAGAA
GCGTCGGATTGGTGAGTCGACGCGTGTCGCTCTCGTTGACTCCGATGACA
ACGTCGTTGCGATTTTGAACGACATTGAGATCTACAAGCACCCCAAAGAA
GAAAGGATAGCCCGAACATGGGGGACA
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