CX286901

Overview
NameCX286901
Unique NameCX286901
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length582
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX286901 vs. ExPASy Swiss-Prot
Match: DHGY_CUCSA (Glycerate dehydrogenase OS=Cucumis sativus GN=HPR-A PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.488e-38
Identity = 76/92 (82.61%), Postives = 83/92 (90.22%), Query Frame = -1 
Query:  307 NPMFRVGLDVFEDEPYMKPGLAEMKNAIVVPHIASASKWTREGMATLAALNVLGKIKGYPIWGNPNQVEPFLNENXXXXXXXXSIVNSKALG 582
            NPMFRVGLDVFEDEPYMKPGLA+MKNAI+VPHIASASKWTREGMATLAALNVLGKIKGYP+W +PN+VEPFL+EN        SIVN+KALG
Sbjct:  289 NPMFRVGLDVFEDEPYMKPGLADMKNAIIVPHIASASKWTREGMATLAALNVLGKIKGYPVWSDPNRVEPFLDENVSPPAASPSIVNAKALG 380
The following BLAST results are available for this feature:
BLAST of CX286901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DHGY_CUCSA1.488e-3882.61Glycerate dehydrogenase OS=Cucumis sativus GN=HPR-... [more]
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Properties
Property NameValue
Genbank descriptionC01002D03Rv Veg1 Citrus clementina cDNA clone C01002D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286901 ID=CX286901; Name=CX286901; organism=Citrus clementina; type=EST; length=582bp
TTTTTTTTTTTTTTTTTTTTAGTAGAATAAGAATGCAAATTGAAATCCGA
AAATTTTCTAGGAGAATTTGGGTTCGCTGGCTTCAGGTCATTTAAGATAC
AGCAGAAAATGTGAAATTATGAAGCCAGTCAATACAACACAACTGCGCAA
AAGCACGTACGTACATGGTTGTTAATGCTTCTCATAATGAAAATTTTGAA
CACTCACATCAAAATACACTTCAAACTTAGTAAGGTGCTCTCTATGCACA
CCATTAGGCCCCGATGTGGTGAAGCTTCTGAGAGCTTAAAGCCTTGAAAC
CGGCAAACCCAATGCCTTTGAGTTCACAATGCTTGGACTTGCAGCAGGAG
GCGGAGCATTCTCGTTCAAGAATGGTTCTACTTGATTTGGGTTACCCCAT
ATGGGGTATCCTTTGATCTTTCCCAGGACATTCAGAGCAGCAAGGGTTGC
CATTCCTTCACGAGTCCACTTGGATGCGGAAGCAATGTGAGGTACCACGA
TGGCGTTCTTCATTTCAGCGAGGCCAGGCTTCATGTAAGGCTCATCCTCA
AAGACATCAAGACCGACACGAAACATTGGATT
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