CX286907
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX286907 vs. ExPASy Swiss-Prot
Match: HMGL_IPONI (HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.104e-21 Identity = 54/102 (52.94%), Postives = 65/102 (63.73%), Query Frame = -2 Query: 323 GKRKAVLKASRSSNKR---TKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDXXXXXXXXXXXXXKLDYEKLMTAYN 619 GK KA + K+ TK K A KDPNKPKRPPSAFFVF+E+FRK YK++HPN K+V+ VGKAGG+KWK LT K +YEK + AYN Sbjct: 4 GKSKAKSDNKLAVKKQAADTKKTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYN 105
BLAST of CX286907 vs. ExPASy Swiss-Prot
Match: HMGL_SOYBN (HMG1/2-like protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.196e-21 Identity = 53/98 (54.08%), Postives = 64/98 (65.31%), Query Frame = -2 Query: 323 KRKAVLKASRSSNKRTKNVKSAKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDXXXXXXXXXXXXXKLDYEKLMTAYN 616 K+ A KA + + K A KDPNKPKRPPSAFFVF+EEFRKV+ +EHP KAVSAVGKA G KWK+++D K++YEK M AYN Sbjct: 21 KKGAATKARKPAGKG-----KAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYN 113
BLAST of CX286907 vs. ExPASy Swiss-Prot
Match: MNB1B_MAIZE (DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.671e-18 Identity = 49/103 (47.57%), Postives = 63/103 (61.17%), Query Frame = -2 Query: 323 GKRKAVLKASRSSNKRTKNVKSAK----KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDXXXXXXXXXXXXXKLDYEKLMTAYN 619 G KA K + S K K K KDPNKPKR PSAFFVF+EEFRK +K+++P K+V+AVGKA G++WKSL++ KL+Y K + AYN Sbjct: 8 GAAKADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYN 110
BLAST of CX286907 vs. ExPASy Swiss-Prot
Match: HMGL_VICFA (HMG1/2-like protein OS=Vicia faba PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.407e-18 Identity = 49/102 (48.04%), Postives = 64/102 (62.75%), Query Frame = -2 Query: 323 AGKRKAVLKASRSSNKRTKNVKSAK--KDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDXXXXXXXXXXXXXKLDYEKLMTAYN 622 A + AV K ++ K K K KDPNKPKRPPSAFFVF+ +FR+ YK++HPN K+V+AVGKA GE+WKSL++ K +YE + AYN Sbjct: 13 AETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYN 114
BLAST of CX286907 vs. ExPASy Swiss-Prot
Match: HMGL_WHEAT (HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.112e-16 Identity = 45/97 (46.39%), Postives = 60/97 (61.86%), Query Frame = -2 Query: 323 KAVLKASRSSNKRTKNVKS-AKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDXXXXXXXXXXXXXKLDYEKLMTAYN 610 K +K+ + K K A KDPNKPKR PSAFFVF+ EFR+ +KQ++P K+V+AVGKA GE+WKSL++ K +Y K + AYN Sbjct: 15 KLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYN 111 The following BLAST results are available for this feature:
BLAST of CX286907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX286907 ID=CX286907; Name=CX286907; organism=Citrus clementina; type=EST; length=623bpback to top |