CX286918

Overview
NameCX286918
Unique NameCX286918
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length492
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: NADO1_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os10g0113000 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.921e-29
Identity = 57/116 (49.14%), Postives = 87/116 (75.00%), Query Frame = -1
Query:  145 CKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKINQIAQRRLIPSDFLISPHGPFKTPEELWN 492
            C+ +G+ +  YSPLGA GT WGS  VM++  L++IA A GKT+AQ+ LRW+ EQG  ++V++ N +R+K+NL IF+WELTD++ ++I+Q+ Q R +P    IS HGP+K+ E+LW+
Sbjct:  203 CRREGVQLCGYSPLGAKGTPWGSAAVMDSGVLQEIAGAKGKTLAQICLRWLYEQGDVLLVKTYNEKRMKENLDIFNWELTDEERERISQLPQLRGLPGLEFISDHGPYKSVEDLWD 318          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: 6DCS_SOYBN (NAD(P)H-dependent 6'-deoxychalcone synthase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 4.006e-27
Identity = 65/118 (55.08%), Postives = 83/118 (70.34%), Query Frame = -1
Query:  142 CKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKINQIAQRRLIPSDFLISPHGPFKTP-EELWND 492
            CK  G+ VTA+SPL    +R G N+VMEN+ LK+IAEAHGK++AQVSLRW+ EQGVT V +S + ER+ QNL IFDW LT+ D+ KI+QI+Q RLI         GP K    +LW+D
Sbjct:  205 CKENGIIVTAFSPLRKGASR-GPNEVMENDVLKEIAEAHGKSIAQVSLRWLYEQGVTFVPKSYDKERMNQNLHIFDWALTEQDHHKISQISQSRLI--------SGPTKPQLADLWDD 313          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: NADO2_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=Os10g0113100 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 5.231e-27
Identity = 53/116 (45.69%), Postives = 82/116 (70.69%), Query Frame = -1
Query:  145 CKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKINQIAQRRLIPSDFLISPHGPFKTPEELWN 492
            C+ +G+ +  YSPLGA GT WGS  VM++  L  IA+  GKT+AQ+ LRW+ EQG  ++V++ N  R+K+NL IFDWELT+++ DKI+++ Q+R +     +  +GP+K  E+LW+
Sbjct:  205 CRREGVQLCGYSPLGAKGTPWGSAAVMDSGVLHDIAQTKGKTLAQICLRWMYEQGDVLLVKTYNENRMKENLDIFDWELTEEERDKISKLPQQRGLTGMQFVCDNGPYKCVEDLWD 320          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: ALRB_DICDI (Aldose reductase B OS=Dictyostelium discoideum GN=alrB PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.209e-15
Identity = 42/106 (39.62%), Postives = 64/106 (60.38%), Query Frame = -1
Query:  181 CKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKINQIAQ--RRLIPSDFLISP 492
            C   G+ +TAYSPLG      G   ++ NE LK IA+ H KTVA V  +W+ ++G+  + +S NP R+ +N  IFD++L+++D DKIN +    R   P++F   P
Sbjct:  208 CDRYGIVLTAYSPLGQ-----GKCDLLSNETLKSIADKHNKTVANVIFKWLNQRGIVTIPKSSNPARIIENFNIFDFQLSNEDMDKINSLNSNLRTCTPANFCKIP 308          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: ALDR_HORVU (Aldose reductase OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.746e-14
Identity = 37/119 (31.09%), Postives = 73/119 (61.34%), Query Frame = -1
Query:  145 CKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKINQIA-QRRLIPSD--FLISPHGPFKTPEELWN 492
            CK  G++VTAYSPLG+       + V+E     ++A    KT  QV ++W +++G +V+ +S   ER+K+N+ +F WE+ ++D+  +  I  ++R++  +  F+   HGP+++  ++W+
Sbjct:  204 CKKHGIHVTAYSPLGSSEKNLAHDPVVE-----KVANKLNKTPGQVLIKWALQRGTSVIPKSSKDERIKENIQVFGWEIPEEDFKVLCSIKDEKRVLTGEELFVNKTHGPYRSAADVWD 317          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: GR_BACSU (Glyoxal reductase OS=Bacillus subtilis GN=yvgN PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.079e-14
Identity = 38/90 (42.22%), Postives = 58/90 (64.44%), Query Frame = -1
Query:  223 CKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKINQI 492
            CK +G+ + A+SPL          Q+++NE L QIAE H K+VAQV LRW ++ GV  + +S+   R+ +N  IFD+EL+ +D DKI+ +
Sbjct:  179 CKGQGIQLEAWSPLM-------QGQLLDNEVLTQIAEKHNKSVAQVILRWDLQHGVVTIPKSIKEHRIIENADIFDFELSQEDMDKIDAL 261          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: A1A1A_DANRE (Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=akr1a1a PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 1.478e-13
Identity = 40/122 (32.79%), Postives = 71/122 (58.20%), Query Frame = -1
Query:  142 CKVKGMNVTAYSPLGAVGTRW---GSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKINQI--AQRRLIPSDFLISPHGPFKTPEELWND 492
            C  + + VTAYSPLG+    W   G   ++++  +  IA+++ KT AQV +RW +++GV  + +S+ P R+KQN+ +FD++L+D+D   I      +R +IP+          K  +++W D
Sbjct:  199 CWSRNLTVTAYSPLGSPDRPWVTPGEALLLDDPRVVGIAKSYNKTPAQVIIRWHIQRGVVCIPKSVTPSRIKQNIEVFDFKLSDEDMRLIESFNRNERFIIPT--------VIKDGQKIWRD 312          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: Y1984_MYCSK (Uncharacterized oxidoreductase Mkms_1984 OS=Mycobacterium sp. (strain KMS) GN=Mkms_1984 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.930e-13
Identity = 36/84 (42.86%), Postives = 54/84 (64.29%), Query Frame = -1
Query:  229 GMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKIN 480
            G+   AY PLG         +++++ A+  +A+AHGKT AQV LRW ++ G  V+ RS NP+R+  NL +FD+ELTDD+   +N
Sbjct:  189 GIVTEAYGPLGV-------GRLLDHAAVTGVAQAHGKTPAQVLLRWSIQLGNVVIARSANPDRITSNLEVFDFELTDDEMATLN 265          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: Y1938_MYCSS (Uncharacterized oxidoreductase Mmcs_1938 OS=Mycobacterium sp. (strain MCS) GN=Mmcs_1938 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.930e-13
Identity = 36/84 (42.86%), Postives = 54/84 (64.29%), Query Frame = -1
Query:  229 GMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKIN 480
            G+   AY PLG         +++++ A+  +A+AHGKT AQV LRW ++ G  V+ RS NP+R+  NL +FD+ELTDD+   +N
Sbjct:  189 GIVTEAYGPLGV-------GRLLDHAAVTGVAQAHGKTPAQVLLRWSIQLGNVVIARSANPDRITSNLEVFDFELTDDEMATLN 265          
BLAST of CX286918 vs. ExPASy Swiss-Prot
Match: ALD1_MOUSE (Aldose reductase-related protein 1 OS=Mus musculus GN=Akr1b7 PE=2 SV=4)

HSP 1 Score: 75.0998 bits (183), Expect = 1.930e-13
Identity = 37/86 (43.02%), Postives = 60/86 (69.77%), Query Frame = -1
Query:  244 CKVKGMNVTAYSPLGAVGTRWGSNQ---VMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDD 492
            C+ KG+ VTAYSPLG+    +   +   VME   +K+IA  H KTVAQV +R+ V++ V V+ +S+ P R+++NL +FD++L+++D
Sbjct:  200 CQSKGIAVTAYSPLGSPDRPYAKPEDPVVMEIPKIKEIAAKHKKTVAQVLIRFHVQRNVVVIPKSVTPSRIQENLQVFDFQLSEED 285          
The following BLAST results are available for this feature:
BLAST of CX286918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
NADO1_ORYSJ1.921e-2949.14Probable NAD(P)H-dependent oxidoreductase 1 OS=Ory... [more]
6DCS_SOYBN4.006e-2755.08NAD(P)H-dependent 6'-deoxychalcone synthase OS=Gly... [more]
NADO2_ORYSJ5.231e-2745.69Probable NAD(P)H-dependent oxidoreductase 2 OS=Ory... [more]
ALRB_DICDI1.209e-1539.62Aldose reductase B OS=Dictyostelium discoideum GN=... [more]
ALDR_HORVU1.746e-1431.09Aldose reductase OS=Hordeum vulgare PE=1 SV=1[more]
GR_BACSU5.079e-1442.22Glyoxal reductase OS=Bacillus subtilis GN=yvgN PE=... [more]
A1A1A_DANRE1.478e-1332.79Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=... [more]
Y1984_MYCSK1.930e-1342.86Uncharacterized oxidoreductase Mkms_1984 OS=Mycoba... [more]
Y1938_MYCSS1.930e-1342.86Uncharacterized oxidoreductase Mmcs_1938 OS=Mycoba... [more]
ALD1_MOUSE1.930e-1343.02Aldose reductase-related protein 1 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionC01002E08Rv Veg1 Citrus clementina cDNA clone C01002E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX286918 ID=CX286918; Name=CX286918; organism=Citrus clementina; type=EST; length=492bp
CTCGTGCCGATTTTTTTTTACAAAAGTGTTTGCATTTCCATCATTATTAA
AATTCAAATTATAGAACCTTACATTTGAAATTAATTATTACATTTCATAT
AATTTTTGGAATATTTGTATTTCGAAAGTCTGAAACTAGCCATCATTCCA
CAGCTCCTCAGGGGTCTTGAATGGTCCATGAGGGGAAATAAGGAAATCAC
TTGGTATCAATCTACGCTGTGCGATTTGATTAATCTTGTCATAGTCGTCA
TCAGTTAATTCCCAATCGAAGATCCCCAGGTTCTGCTTCAATCTCTCTGG
ATTGAGGCTCCTGACAACAACTGTCACTCCTTGCTCAACTATCCATCTAA
GAGAAACCTGAGCGACAGTCTTGCCATGAGCCTCTGCAATCTGCTTTAGT
GCTTCATTCTCCATGACTTGATTGCTTCCCCATCTTGTCCCTACGGCTCC
CAAAGGTGAGTACGCCGTGACATTCATGCCCTTGACCTTGCA
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