CX286934
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX286934 vs. ExPASy Swiss-Prot
Match: NOP56_MOUSE (Nucleolar protein 56 OS=Mus musculus GN=Nop56 PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.329e-19 Identity = 46/70 (65.71%), Postives = 54/70 (77.14%), Query Frame = 3 Query: 15 GTRARYLANKCSIASRIDCFAEKNTTIFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAIESTENNDTEM 224 G +RYLANKCSIASRIDCF+E T++FGEKLREQVEERL FY+ G PRKN+DVMK A+ E E+ Sbjct: 366 GRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPRKNLDVMKEAVVQAEEAAAEI 435
BLAST of CX286934 vs. ExPASy Swiss-Prot
Match: NOP56_PONAB (Nucleolar protein 56 OS=Pongo abelii GN=NOP56 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.266e-19 Identity = 46/70 (65.71%), Postives = 54/70 (77.14%), Query Frame = 3 Query: 15 GTRARYLANKCSIASRIDCFAEKNTTIFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAIESTENNDTEM 224 G +RYLANKCSIASRIDCF+E T++FGEKLREQVEERL FY+ G PRKN+DVMK A+ E E+ Sbjct: 366 GRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPRKNLDVMKEAMVQAEEAAAEI 435
BLAST of CX286934 vs. ExPASy Swiss-Prot
Match: NOP56_MACFA (Nucleolar protein 56 OS=Macaca fascicularis GN=NOP56 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.266e-19 Identity = 46/70 (65.71%), Postives = 54/70 (77.14%), Query Frame = 3 Query: 15 GTRARYLANKCSIASRIDCFAEKNTTIFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAIESTENNDTEM 224 G +RYLANKCSIASRIDCF+E T++FGEKLREQVEERL FY+ G PRKN+DVMK A+ E E+ Sbjct: 366 GRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPRKNLDVMKEAMVQAEEAAAEI 435
BLAST of CX286934 vs. ExPASy Swiss-Prot
Match: NOP56_HUMAN (Nucleolar protein 56 OS=Homo sapiens GN=NOP56 PE=1 SV=4) HSP 1 Score: 95.1301 bits (235), Expect = 2.266e-19 Identity = 46/70 (65.71%), Postives = 54/70 (77.14%), Query Frame = 3 Query: 15 GTRARYLANKCSIASRIDCFAEKNTTIFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAIESTENNDTEM 224 G +RYLANKCSIASRIDCF+E T++FGEKLREQVEERL FY+ G PRKN+DVMK A+ E E+ Sbjct: 366 GRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPRKNLDVMKEAMVQAEEAAAEI 435
BLAST of CX286934 vs. ExPASy Swiss-Prot
Match: NOP56_BOVIN (Nucleolar protein 56 OS=Bos taurus GN=NOP56 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.266e-19 Identity = 46/70 (65.71%), Postives = 54/70 (77.14%), Query Frame = 3 Query: 15 GTRARYLANKCSIASRIDCFAEKNTTIFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAIESTENNDTEM 224 G +RYLANKCSIASRIDCF+E T++FGEKLREQVEERL FY+ G PRKN+DVMK A+ E E+ Sbjct: 366 GRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERLSFYETGEIPRKNLDVMKEAMVQAEEAAAEI 435
BLAST of CX286934 vs. ExPASy Swiss-Prot
Match: YZVL_CAEEL (Uncharacterized NOP5 family protein K07C5.4 OS=Caenorhabditis elegans GN=K07C5.4 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 8.911e-16 Identity = 48/114 (42.11%), Postives = 65/114 (57.02%), Query Frame = 3 Query: 15 GTRARYLANKCSIASRIDCFAEKNTTIFGEKLREQVEERLDFYDKGVAPRKNIDVMK----AAIESTENNDTEMKEAATDTSGXXXXXXXXXXEIAVDGE-PMSADKVAATNGD 341 G +RYLANKCSIA+R+DCF+E + +GE LR+QVE+RL+++ G P+KNIDVMK AA+E E + K+AA E VD + P K + GD Sbjct: 372 GRVSRYLANKCSIAARVDCFSETPVSTYGEFLRQQVEDRLEYFTSGTVPKKNIDVMKEAEEAAVEVKEKVIKKKKKAAKKAKRLAEESVTATAEAEVDEDAPKPKKKKKSKAGD 485
BLAST of CX286934 vs. ExPASy Swiss-Prot
Match: NOP56_DICDI (Nucleolar protein 56 OS=Dictyostelium discoideum GN=nop56 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.858e-13 Identity = 37/80 (46.25%), Postives = 55/80 (68.75%), Query Frame = 3 Query: 15 GTRARYLANKCSIASRIDCFAEKNTTIFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAIESTENN--DTEMKEAATDTS 248 G AR L+NK SIA+RIDCF++ T FG L++QV +R+ F++ GVAP++N+DVMK IE E + + E+K ++S Sbjct: 364 GRIARCLSNKISIATRIDCFSDNPTAKFGVALKQQVADRIKFFNNGVAPKRNLDVMKEVIEEVEKDFAEEEVKPVVKESS 443
BLAST of CX286934 vs. ExPASy Swiss-Prot
Match: NOP56_SCHPO (Nucleolar protein 56 OS=Schizosaccharomyces pombe GN=nop56 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.406e-13 Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 3 Query: 15 GTRARYLANKCSIASRIDCFAEKNTTIFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAIE 197 G +R+LANKCSIASRID F++ TT FG+ LR QVEERL+F+D GVAP +N M A E Sbjct: 369 GRISRFLANKCSIASRIDNFSDAPTTAFGQVLRRQVEERLNFFDTGVAPTRNSIAMAEAYE 429 The following BLAST results are available for this feature:
BLAST of CX286934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX286934 ID=CX286934; Name=CX286934; organism=Citrus clementina; type=EST; length=547bpback to top |