CX286955
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX286955 vs. ExPASy Swiss-Prot
Match: RL5_CUCSA (60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.025e-55 Identity = 105/128 (82.03%), Postives = 115/128 (89.84%), Query Frame = 1 Query: 1 ALKGALDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKALN 384 ALKGALDGGLDIPHS+KRFAG++K+ +QLD EVHRKYI+ GHVAAYMRTLMEDEPEKYQSHF EYIK+GIEAD LE LYKKVHAAIRA+P KKS+K P HKRYNLKKLTY+ERKARLVERL ALN Sbjct: 161 ALKGALDGGLDIPHSDKRFAGYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKGIEADELEGLYKKVHAAIRANPIAKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALN 288
BLAST of CX286955 vs. ExPASy Swiss-Prot
Match: RL52_ORYSJ (60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica GN=RPL5B PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 9.598e-54 Identity = 98/128 (76.56%), Postives = 112/128 (87.50%), Query Frame = 1 Query: 1 ALKGALDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKALN 384 ALKGALDGGLDIPHS+KRFAGF KD KQLD+++HRKYIY GHVA YMR++ E+EPEK+Q+HF EY+K+GI+AD +E LYKKVHAAIRADP KS KK PA HKRYNLKKLTYE+RKA LVERL ALN Sbjct: 162 ALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMESLYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALN 289
BLAST of CX286955 vs. ExPASy Swiss-Prot
Match: RL51_ORYSJ (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.254e-53 Identity = 98/128 (76.56%), Postives = 112/128 (87.50%), Query Frame = 1 Query: 1 ALKGALDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKALN 384 ALKGALDGGLDIPHS+KRFAGF KD KQLD+++HRKYIY GHVA YMR++ E+EPEK+Q+HF EY+K+GI+AD +E LYKKVHAAIRADP KS KK PA HKRYNLKKLTYE+RKA LVERL ALN Sbjct: 162 ALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALN 289
BLAST of CX286955 vs. ExPASy Swiss-Prot
Match: RL51_ORYSI (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A PE=2 SV=2) HSP 1 Score: 209.149 bits (531), Expect = 1.254e-53 Identity = 98/128 (76.56%), Postives = 112/128 (87.50%), Query Frame = 1 Query: 1 ALKGALDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKALN 384 ALKGALDGGLDIPHS+KRFAGF KD KQLD+++HRKYIY GHVA YMR++ E+EPEK+Q+HF EY+K+GI+AD +E LYKKVHAAIRADP KS KK PA HKRYNLKKLTYE+RKA LVERL ALN Sbjct: 162 ALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALN 289
BLAST of CX286955 vs. ExPASy Swiss-Prot
Match: RL52_ARATH (60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2 SV=3) HSP 1 Score: 207.608 bits (527), Expect = 3.647e-53 Identity = 96/128 (75.00%), Postives = 114/128 (89.06%), Query Frame = 1 Query: 1 ALKGALDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKALN 384 ALKGALDGGLDIPHS+KRFAGF K++KQLDAE+HR YIY GHV+ YM+ L EDEPEK Q+HF YIK+G+EA+++EE+YKKVHAAIRA+PN KK+EK P EHKRYNLKKLTYEERK +L+ER+KALN Sbjct: 161 ALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALN 288
BLAST of CX286955 vs. ExPASy Swiss-Prot
Match: RL51_ARATH (60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=2) HSP 1 Score: 205.297 bits (521), Expect = 1.810e-52 Identity = 96/128 (75.00%), Postives = 113/128 (88.28%), Query Frame = 1 Query: 1 ALKGALDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKALN 384 ALKGALDGGLDIPHS+KRFAGF K++KQLDAE+HR YIY GHV+ YM+ L EDEPEK Q+HF YIK+G+EA+++EELYKKVHAAIRADPN KK+ K P +HKRYNLKKLTYEERK +L+ER+KALN Sbjct: 161 ALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALN 288
BLAST of CX286955 vs. ExPASy Swiss-Prot
Match: RL5_SOLME (60S ribosomal protein L5 (Fragment) OS=Solanum melongena GN=RPL5 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 6.895e-44 Identity = 84/106 (79.25%), Postives = 92/106 (86.79%), Query Frame = 1 Query: 67 SKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKALN 384 SKDSKQLDAEVHRKYIY GHVAAYM LMEDEPEKYQSHF YIK + DN+EE+YKKVHAAIR DP+ KKS+K+PP HKRYNLKKLTYEERKA+L+ERL ALN Sbjct: 2 SKDSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVHAAIRPDPSPKKSQKQPPKTHKRYNLKKLTYEERKAKLIERLNALN 107
BLAST of CX286955 vs. ExPASy Swiss-Prot
Match: RL5_LYSTE (60S ribosomal protein L5 OS=Lysiphlebus testaceipes GN=RpL5 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.210e-33 Identity = 68/126 (53.97%), Postives = 92/126 (73.02%), Query Frame = 1 Query: 1 ALKGALDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKA 378 A+KGA+DGGL+IPHS KRF G+ +SK +A+VHR++I+ H+A YM+TL E+EPE +Q F +YIK GI AD +EE+YKK H AIRADP++ + K KR+N KLT ERK R V+++KA Sbjct: 162 AMKGAVDGGLNIPHSTKRFPGYDNESKSFNADVHRQHIFAHHIANYMKTLEENEPENFQRQFSQYIKNGITADGIEEMYKKAHEAIRADPDRAEIVKTKEPVKKRWNRAKLTLSERKDR-VKQIKA 286
BLAST of CX286955 vs. ExPASy Swiss-Prot
Match: RL5_BOMMO (60S ribosomal protein L5 OS=Bombyx mori GN=RpL5 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.300e-31 Identity = 64/124 (51.61%), Postives = 91/124 (73.39%), Query Frame = 1 Query: 1 ALKGALDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSE-KKPPAEHKRYNLKKLTYEERKARLVER 369 A+KGA+DGGL++PHS KRF G+ +SK+ +AEVHR +I+ HVA YMR+L +D+ + ++ F +YIK G+ AD +E +YKK H AIRADP+ KK E KK + KR+N +KLT ERK R+ ++ Sbjct: 162 AMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQK 285
BLAST of CX286955 vs. ExPASy Swiss-Prot
Match: RL5_DROME (60S ribosomal protein L5 OS=Drosophila melanogaster GN=RpL5 PE=1 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 6.693e-31 Identity = 65/121 (53.72%), Postives = 88/121 (72.73%), Query Frame = 1 Query: 1 ALKGALDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYCGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPA-EHKRYNLKKLTYEERKARL 360 A+KGA+DGGL+IPHS KRF G+S ++K +A+VHR +I+ HVA YMR+L E++ E ++ F YIK GI AD+LE++YKK H AIR DP K + KK A KR+N KKLT E+RK ++ Sbjct: 162 AMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEESFKRQFSRYIKLGIRADDLEDIYKKAHQAIRNDPTHKVTAKKSSAVTKKRWNAKKLTNEQRKTKI 282 The following BLAST results are available for this feature:
BLAST of CX286955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CX286955 ID=CX286955; Name=CX286955; organism=Citrus clementina; type=EST; length=582bpback to top |