CX287002

Overview
NameCX287002
Unique NameCX287002
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length617
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig19 contig Ccv1_Contig19:1..617. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287002 vs. ExPASy Swiss-Prot
Match: CYNS_ARATH (Cyanate hydratase OS=Arabidopsis thaliana GN=CYN PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.306e-56
Identity = 109/155 (70.32%), Postives = 124/155 (80.00%), Query Frame = 2
Query:   41 ETSRKSSVTNLLQAVKRESGKSFNQIAEETGLTNVYVAQLLRRQAQLKPETAPKLRAALPELPDELIHEMMRPPMRSYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGITSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPYSEQKSEHM 505
            E ++K SVTN L AVK  SGK+F+Q+A ETGLTNVYVAQLLRRQAQLKP+T PKL+ ALP L DELI +MM PP RSYDPNLIQEPT+YRLNEAVMHFGESIKEIINE+FGDGI SAIDFYCS              +T DGKYL +SEQ++E+M
Sbjct:    2 EAAKKQSVTNQLLAVKSASGKTFSQLAAETGLTNVYVAQLLRRQAQLKPDTVPKLKEALPALTDELIGDMMSPPWRSYDPNLIQEPTIYRLNEAVMHFGESIKEIINEDFGDGIMSAIDFYCSVDKIKGVDGNNRVVVTLDGKYLSHSEQRTENM 156          
BLAST of CX287002 vs. ExPASy Swiss-Prot
Match: CYNS_ORYSJ (Cyanate hydratase OS=Oryza sativa subsp. japonica GN=CYN PE=2 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 2.386e-53
Identity = 103/152 (67.76%), Postives = 116/152 (76.32%), Query Frame = 2
Query:   50 RKSSVTNLLQAVKRESGKSFNQIAEETGLTNVYVAQLLRRQAQLKPETAPKLRAALPELPDELIHEMMRPPMRSYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGITSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPYSEQKSEHM 505
            R + V   L A K ES KSF++I EE GLTNVYVAQLLRRQAQLKPETAP LRAA+P L D+L+  MM PP RSY P+++ EP +YRLNEAVMHFGESIKEIINEEFGDGI SAIDFYCS              +TFDGKYLPYSEQ+S+HM
Sbjct:    8 RAAGVVRRLMAAKAESRKSFSEIGEEAGLTNVYVAQLLRRQAQLKPETAPALRAAVPGLTDDLVALMMEPPFRSYHPDIVHEPAIYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSVDKVQGADGKDRVVVTFDGKYLPYSEQRSDHM 159          
BLAST of CX287002 vs. ExPASy Swiss-Prot
Match: CYNS_MARMS (Cyanate hydratase OS=Marinomonas sp. (strain MWYL1) GN=cynS PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.786e-16
Identity = 51/144 (35.42%), Postives = 77/144 (53.47%), Query Frame = 2
Query:   50 RKSSVTNLLQAVKRESGKSFNQIAEETGLTNVYVAQLLRRQAQLKPETAPKLRAALPELPDELIHEMMRPPMRSYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGITSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPY 481
            +K  VT  + A+K+E   ++  IA+  G+T+V++            E A KL A L  LP E    +M  P +++D  + Q+P +YRL E V  +G ++KE+I E+FGDGI SAIDF                 +T +GK+LPY
Sbjct:    2 KKIDVTEAIFAIKKEKNLTWEAIADAVGMTDVWITSACLGMNSCTEEVAEKLVAFLG-LPAEAKSVLMEYPTKTWDEAIPQDPLIYRLYEVVGVYGPTLKEVIQEKFGDGIMSAIDF-SMKVDKEENPKGDRVILTMNGKFLPY 143          
BLAST of CX287002 vs. ExPASy Swiss-Prot
Match: CYNS_PSESM (Cyanate hydratase OS=Pseudomonas syringae pv. tomato GN=cynS PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.196e-16
Identity = 50/148 (33.78%), Postives = 80/148 (54.05%), Query Frame = 2
Query:   38 SETSRKSSVTNLLQAVKRESGKSFNQIAEETGLTNVYVAQLLRRQAQLKPETAPKLRAALPELPDELIHEMMRPPMRSYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGITSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPY 481
            S T R+     +LQA K  +  ++  +AE+TGL+ VYV   L  Q  L P+   ++ A    L  + + E+   P+R +  ++  +PT+YR +E V  +G ++K +++E+FGDGI SAI+F                 IT DGK+LPY
Sbjct:    7 SSTPRQQLTERVLQA-KAANNLTWASLAEDTGLSVVYVTAALLGQHPL-PQAVAEVVAERLGLDRDAVVELQTIPLRGHVEDVSSDPTIYRFHEMVQVYGTTLKALVHEQFGDGIISAINFKLDIRKVEDPEGGERAVITLDGKFLPY 152          
BLAST of CX287002 vs. ExPASy Swiss-Prot
Match: CYNS_ACAM1 (Cyanate hydratase OS=Acaryochloris marina (strain MBIC 11017) GN=cynS PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.158e-15
Identity = 51/145 (35.17%), Postives = 75/145 (51.72%), Query Frame = 2
Query:   56 SSVTNLLQAVKRESGKSFNQIAEETGLTNVYVAQLLRRQAQLKPETAPKLRAALPELPDELIHEMMRPPMR-SYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGITSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPYSE 487
            + +T  L A K+  G SF  + +  G    ++A ++ RQA    E A K+  AL  LP EL   +  PPM+ S +P +  +P VYR  E +  +G  +K +I+E+FGDGI SAIDF                 +T  GK+LPY +
Sbjct:    4 AEITEKLLAAKKAKGISFEDLEKIVGCDETWIASVIYRQASASTEEAEKIVTALG-LPAELAEPLTVPPMKGSLEPVIPTDPLVYRFYEIMQVYGVPVKAVIHEKFGDGIMSAIDFSIE-VDKVPDPKGDRVQVTMCGKFLPYKK 146          
BLAST of CX287002 vs. ExPASy Swiss-Prot
Match: CYNS_TERTT (Cyanate hydratase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=cynS PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.579e-15
Identity = 50/144 (34.72%), Postives = 75/144 (52.08%), Query Frame = 2
Query:   50 RKSSVTNLLQAVKRESGKSFNQIAEETGLTNVYVAQLLRRQAQLKPETAPKLRAALPELPDELIHEMMRPPMRSYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGITSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPY 481
            +K  VT  +   K+E   ++  IA E G+  V+V         +    A KL A L ELP+     +M  P +++D  + Q+P +YRL E V  +G+++KE+I E+FGDGI SAIDF                 +T +GK+LPY
Sbjct:    2 KKIDVTEAIILAKKERNLTWEGIAAELGMGTVWVTSACLGMNSMPEAVAEKLCAYL-ELPEGAKAALMEYPTKAWDKEVPQDPLIYRLYEVVGVYGDTLKEVIQEKFGDGIMSAIDF-TMDVAKEENPKGDRVVLTLNGKFLPY 143          
BLAST of CX287002 vs. ExPASy Swiss-Prot
Match: CYNS_SYNY3 (Cyanate hydratase OS=Synechocystis sp. (strain PCC 6803) GN=cynS PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.399e-15
Identity = 47/144 (32.64%), Postives = 76/144 (52.78%), Query Frame = 2
Query:   56 SSVTNLLQAVKRESGKSFNQIAEETGLTNVYVAQLLRRQAQLKPETAPKLRAALPELPDELIHEMMRPPMRSYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGITSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPYSE 487
            S++T  L   K+  G +F  + +  G   V++A ++ RQA    + A KL   L  L D+L+ E+  P ++   P +  +P +YR  E +  +G  +KE+I+E+FGDGI SAIDF                 +T +GK+LPY +
Sbjct:    7 SAITTKLLEAKKAKGITFADLEQLLGRDEVWIAAVIYRQASASVDEAEKLLHCLG-LSDDLVPELTAPSVKGLGPVVPTDPLIYRFYEIMQVYGMPMKEVIHEKFGDGIMSAIDFTLD-IEKEADPKGDRVKVTMNGKFLPYKK 148          
BLAST of CX287002 vs. ExPASy Swiss-Prot
Match: CYNS_CHRVO (Cyanate hydratase OS=Chromobacterium violaceum GN=cynS PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.503e-15
Identity = 50/152 (32.89%), Postives = 78/152 (51.32%), Query Frame = 2
Query:   26 IEMESETSRKSSVTNLLQAVKRESGKSFNQIAEETGLTNVYVAQLLRRQAQLKPETAPKLRAALPELPDELIHEMMRPPMRSYDPNLIQ-EPTVYRLNEAVMHFGESIKEIINEEFGDGITSAIDFYCSXXXXXXXXXXXXXXITFDGKYLP 478
            ++ + + + + ++T+ + A K     SF  I + TGL+  Y    L  Q  L PE A +L A   EL ++ I  +   P+R   P  +  +PT+YR  E V  +G ++K +++E+FGDGI SAI+F                 IT DGKYLP
Sbjct:    1 MQSQCQPAPRQALTDAVIAAKARKRLSFEDINQGTGLSLAYTTAALLGQHAL-PEAAARLVAERLELDEDAIALLQAIPLRGSIPGGVPTDPTIYRFYEMVQIYGTTLKALVHEQFGDGIISAINFKLDIRKVEDPDGGHRAVITLDGKYLP 151          
BLAST of CX287002 vs. ExPASy Swiss-Prot
Match: CYNS_PSE14 (Cyanate hydratase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=cynS PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.800e-15
Identity = 50/148 (33.78%), Postives = 77/148 (52.03%), Query Frame = 2
Query:   38 SETSRKSSVTNLLQAVKRESGKSFNQIAEETGLTNVYVAQLLRRQAQLKPETAPKLRAALPELPDELIHEMMRPPMRSYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGITSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPY 481
            S   R++    +LQA K     ++  +AE TGL+ VYV   L  Q  L PE   ++ A    L  + + E+   P+R    ++  +PT+YR +E V  +G ++K +++E+FGDGI SAI+F                 IT DGK+LPY
Sbjct:    7 SRAPRQNLTERVLQA-KTAKNLTWAGLAEGTGLSVVYVTAALLGQHPL-PEAVAEVVAERLGLDRDAVAELQTIPLRGNVEDVSSDPTIYRFHEMVQVYGTTLKALVHEQFGDGIISAINFKLDIKKVEDPEGGERAVITLDGKFLPY 152          
BLAST of CX287002 vs. ExPASy Swiss-Prot
Match: CYNS_SYNS3 (Cyanate hydratase OS=Synechococcus sp. (strain CC9311) GN=cynS PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.724e-14
Identity = 50/144 (34.72%), Postives = 68/144 (47.22%), Query Frame = 2
Query:   56 SSVTNLLQAVKRESGKSFNQIAEETGLTNVYVAQLLRRQAQLKPETAPKLRAALPELPDELIHEMMRPPMRSYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGITSAIDFYCSXXXXXXXXXXXXXXITFDGKYLPYSE 487
            S++T  L A K+  G SF  +    GL  V++A L   QA   PE A KL   L   P         P   S DP +  +P +YR  E +  +G  +K++I E+FGDGI SAIDF                 +T  GK+LPY +
Sbjct:    7 STLTASLMAAKKAKGLSFADLEVALGLDEVWIASLFYGQATASPEEAEKLATLLGLDPAITAALQEFPTKGSLDPVIPTDPLIYRFYEIMQVYGMPLKDVIQEKFGDGIMSAIDFTLD-VDKVEDPKGDRVKVTMCGKFLPYKK 149          
The following BLAST results are available for this feature:
BLAST of CX287002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
CYNS_ARATH2.306e-5670.32Cyanate hydratase OS=Arabidopsis thaliana GN=CYN P... [more]
CYNS_ORYSJ2.386e-5367.76Cyanate hydratase OS=Oryza sativa subsp. japonica ... [more]
CYNS_MARMS1.786e-1635.42Cyanate hydratase OS=Marinomonas sp. (strain MWYL1... [more]
CYNS_PSESM5.196e-1633.78Cyanate hydratase OS=Pseudomonas syringae pv. toma... [more]
CYNS_ACAM11.158e-1535.17Cyanate hydratase OS=Acaryochloris marina (strain ... [more]
CYNS_TERTT2.579e-1534.72Cyanate hydratase OS=Teredinibacter turnerae (stra... [more]
CYNS_SYNY34.399e-1532.64Cyanate hydratase OS=Synechocystis sp. (strain PCC... [more]
CYNS_CHRVO7.503e-1532.89Cyanate hydratase OS=Chromobacterium violaceum GN=... [more]
CYNS_PSE149.800e-1533.78Cyanate hydratase OS=Pseudomonas syringae pv. phas... [more]
CYNS_SYNS33.724e-1434.72Cyanate hydratase OS=Synechococcus sp. (strain CC9... [more]

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Properties
Property NameValue
Genbank descriptionC01003E05SK Veg1 Citrus clementina cDNA clone C01003E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287002 ID=CX287002; Name=CX287002; organism=Citrus clementina; type=EST; length=617bp
CGCACGAGGGCTAGAGTGTTTTGTGATCGAAATGGAATCAGAAACGAGCA
GGAAATCGAGCGTGACAAACCTGCTGCAAGCCGTGAAACGAGAATCCGGT
AAGTCATTTAATCAGATTGCAGAAGAGACAGGGCTGACAAACGTCTACGT
TGCGCAGCTACTCAGACGCCAAGCGCAGCTCAAGCCCGAAACTGCCCCCA
AGCTACGGGCAGCCCTGCCCGAGCTGCCCGATGAGCTTATCCACGAGATG
ATGAGACCGCCAATGAGATCGTATGACCCGAACTTGATCCAGGAACCCAC
CGTTTATAGGTTAAACGAAGCGGTTATGCATTTTGGTGAGAGTATTAAGG
AAATTATCAATGAGGAGTTTGGTGATGGCATCACGTCGGCTATAGACTTT
TACTGCTCTGTTGACAAAGTTAAAGGTGTGGATGGGAAAGATCGTGTGGT
CATTACTTTTGATGGAAAATATTTGCCTTATAGTGAGCAGAAGTCGGAGC
ACATGGTTTCAAGACTACAACAGCAGTGAAGTTAATCCATTTCCTACCTG
GTGCAGATTCTATACATGCTTAATACTTATTGTACGAGTGAACTCCCTGG
AGCTACCATAGTTGGAT
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