CX287060
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287060 vs. ExPASy Swiss-Prot
Match: RL24_PRUAV (60S ribosomal protein L24 OS=Prunus avium GN=RPL24 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 4.556e-48 Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 1 Query: 1 VFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEK 291 VFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIA EAVKK+RR TKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEK Sbjct: 30 VFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEK 126
BLAST of CX287060 vs. ExPASy Swiss-Prot
Match: RL24_CICAR (60S ribosomal protein L24 OS=Cicer arietinum GN=RPL24 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 1.122e-46 Identity = 91/97 (93.81%), Postives = 94/97 (96.91%), Query Frame = 1 Query: 1 VFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEK 291 VFLF NSKCKRYFHNRLKPSKLTWTAM+RKQHKKD A EAVKK+RRATKKPYSRSIVGATLEVIQK+RTEKPEVRDAAREAALREIKERIKKTKDEK Sbjct: 30 VFLFVNSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEK 126
BLAST of CX287060 vs. ExPASy Swiss-Prot
Match: RL24_HORVU (60S ribosomal protein L24 OS=Hordeum vulgare GN=RPL24 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.620e-45 Identity = 89/97 (91.75%), Postives = 92/97 (94.85%), Query Frame = 1 Query: 1 VFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEK 291 VFLFANSKCKRYFHNRLKP+KL WTAMYRKQHKKDI AEA KK+RR TKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAALREIKERIKKTKDEK Sbjct: 30 VFLFANSKCKRYFHNRLKPAKLCWTAMYRKQHKKDIHAEAAKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEK 126
BLAST of CX287060 vs. ExPASy Swiss-Prot
Match: RL242_ARATH (60S ribosomal protein L24-2 OS=Arabidopsis thaliana GN=RPL24B PE=2 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 3.610e-45 Identity = 88/97 (90.72%), Postives = 92/97 (94.85%), Query Frame = 1 Query: 1 VFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEK 291 VFLF NSKCKRYFHN+LKPSKL WTAMYRKQHKKD A EAVK++RRATKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAALREIKERIKKTKDEK Sbjct: 30 VFLFLNSKCKRYFHNKLKPSKLAWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEK 126
BLAST of CX287060 vs. ExPASy Swiss-Prot
Match: RL241_ARATH (60S ribosomal protein L24-1 OS=Arabidopsis thaliana GN=RPL24A PE=1 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 4.715e-45 Identity = 88/97 (90.72%), Postives = 92/97 (94.85%), Query Frame = 1 Query: 1 VFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEK 291 VFLF NSKCKRYFHN+LKPSKL WTAMYRKQHKKD A EAVK++RRATKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAALREIKERIKKTKDEK Sbjct: 30 VFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDEK 126
BLAST of CX287060 vs. ExPASy Swiss-Prot
Match: RL24B_SCHPO (60S ribosomal protein L24-B OS=Schizosaccharomyces pombe GN=rpl24b PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.913e-18 Identity = 45/97 (46.39%), Postives = 65/97 (67.01%), Query Frame = 1 Query: 1 VFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEK 291 VF F N K + F R P +L+WT +YR+ HKK I+ E KK+ R T K + R IVGA L+VI+++R ++PEVR AAR AAL++ K++ ++ EK Sbjct: 28 VFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEKRNQRPEVRAAARAAALKQRKDKRAASESEK 123
BLAST of CX287060 vs. ExPASy Swiss-Prot
Match: RL24A_SCHPO (60S ribosomal protein L24-A OS=Schizosaccharomyces pombe GN=rpl24a PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.913e-18 Identity = 45/97 (46.39%), Postives = 65/97 (67.01%), Query Frame = 1 Query: 1 VFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEK 291 VF F N K + F R P +L+WT +YR+ HKK I+ E KK+ R T K + R IVGA L+VI+++R ++PEVR AAR AAL++ K++ ++ EK Sbjct: 28 VFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHKKGISEEHAKKRTRRTVK-HQRGIVGANLDVIKEKRNQRPEVRAAARAAALKQRKDKKAASESEK 123
BLAST of CX287060 vs. ExPASy Swiss-Prot
Match: RL24_NEUCR (60S ribosomal protein L24 OS=Neurospora crassa GN=rpl-24 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.417e-18 Identity = 45/97 (46.39%), Postives = 65/97 (67.01%), Query Frame = 1 Query: 1 VFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEK 291 +F F N K + F R P ++ WT +YR+QHKK I+ E KK+ R T K R+IVGA+LEVI++RR+ +PE R AAR AA++E K + ++T+ K Sbjct: 28 IFRFQNGKSESLFLQRKNPRRIAWTVLYRRQHKKGISEEVAKKRSRRTVKA-QRAIVGASLEVIKERRSMRPEARSAARLAAIKESKAKKQETQAAK 123
BLAST of CX287060 vs. ExPASy Swiss-Prot
Match: RL24_PLUXY (60S ribosomal protein L24 OS=Plutella xylostella GN=RpL24 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.159e-17 Identity = 46/96 (47.92%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 4 FLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEK 291 F F NSKC+ R P K+TWT +YR++ KK E KK+ R T+K Y R+IVGA+L I +R KPEVR A RE A+++ KE+ K TK K Sbjct: 29 FTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQEEEQAKKRTRRTQK-YQRAIVGASLSDIMAKRNMKPEVRKAQREQAIKQAKEQKKSTKASK 123
BLAST of CX287060 vs. ExPASy Swiss-Prot
Match: RL24_DEBHA (60S ribosomal protein L24 OS=Debaryomyces hansenii GN=RPL24 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.432e-17 Identity = 43/94 (45.74%), Postives = 63/94 (67.02%), Query Frame = 1 Query: 1 VFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAAEAVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTK 282 +F F +SK FH R P +++WT +YR+QHKK I+ E+ K++ R T K R+IVGA+LE+I++RR++KP R AAR+ L + KE K K Sbjct: 28 IFRFQSSKSASLFHQRKNPRRISWTVLYRRQHKKGISEESAKRRTRKTVK-NQRAIVGASLELIKERRSQKPSDRKAARDVKLAKDKEAKKADK 120 The following BLAST results are available for this feature:
BLAST of CX287060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287060 ID=CX287060; Name=CX287060; organism=Citrus clementina; type=EST; length=291bpback to top |