CX287081
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS263_ARATH (40S ribosomal protein S26-3 OS=Arabidopsis thaliana GN=RPS26C PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.347e-26 Identity = 57/90 (63.33%), Postives = 61/90 (67.78%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYCXXXXXXXXXXXXXXXXXXXXXEPPQRFMRR-DDVPK 269 IRCSNCGKCCPKDKAIKRF+VRNI EQAA+RDVQEA VY+GYTLPKLYAK QYC PP RF RR +D PK Sbjct: 21 IRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPK 110
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS262_ARATH (40S ribosomal protein S26-2 OS=Arabidopsis thaliana GN=RPS26B PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 6.347e-26 Identity = 57/90 (63.33%), Postives = 61/90 (67.78%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYCXXXXXXXXXXXXXXXXXXXXXEPPQRFMRR-DDVPK 269 IRCSNCGKCCPKDKAIKRF+VRNI EQAA+RDVQEA VY+GYTLPKLYAK QYC PP RF RR +D PK Sbjct: 21 IRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKEDTPK 110
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS261_ARATH (40S ribosomal protein S26-1 OS=Arabidopsis thaliana GN=RPS26A PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 6.347e-26 Identity = 57/90 (63.33%), Postives = 61/90 (67.78%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYCXXXXXXXXXXXXXXXXXXXXXEPPQRFMRR-DDVPK 269 IRCSNCGKCCPKDKAIKRF+VRNI EQAA+RDVQEA VY+GYTLPKLYAK QYC PP RF RR +D PK Sbjct: 21 IRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFTRRKEDTPK 110
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26_ORYSJ (40S ribosomal protein S26 OS=Oryza sativa subsp. japonica GN=RPS26 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 5.941e-24 Identity = 52/89 (58.43%), Postives = 59/89 (66.29%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYCXXXXXXXXXXXXXXXXXXXXXEPPQRFMRRDDVPK 269 IRCSNC KCCPKDKAIKRF VRNI EQAA+RDVQEA V+DGY LPKLYAK+ +C PP+RF RR+D P+ Sbjct: 21 IRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAHIVRVRSRENRRDRRPPERFRRREDRPQ 109
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26_CAEEL (40S ribosomal protein S26 OS=Caenorhabditis elegans GN=rps-26 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.730e-18 Identity = 42/84 (50.00%), Postives = 50/84 (59.52%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYCXXXXXXXXXXXXXXXXXXXXXEPPQRFMRR 254 IRC+NCG+CCPKDKAIK+F+VRNI E AAVRD+ +A Y Y LPKLY K+ YC PP RF +R Sbjct: 21 IRCTNCGRCCPKDKAIKKFVVRNIVEAAAVRDIGDASAYTQYALPKLYHKLHYCIACAIHSKVVRNRSREARRDRNPPPRFGQR 104
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26_RAT (40S ribosomal protein S26 OS=Rattus norvegicus GN=Rps26 PE=3 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 8.309e-18 Identity = 41/89 (46.07%), Postives = 50/89 (56.18%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYCXXXXXXXXXXXXXXXXXXXXXEPPQRFMRRDDVPK 269 IRC+NC +C PKDKAIK+F++RNI E AAVRD+ EA V+D Y LPKLY K+ YC PP RF P+ Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPR 109
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26_PIG (40S ribosomal protein S26 OS=Sus scrofa GN=RPS26 PE=3 SV=4) HSP 1 Score: 88.9669 bits (219), Expect = 8.309e-18 Identity = 41/89 (46.07%), Postives = 50/89 (56.18%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYCXXXXXXXXXXXXXXXXXXXXXEPPQRFMRRDDVPK 269 IRC+NC +C PKDKAIK+F++RNI E AAVRD+ EA V+D Y LPKLY K+ YC PP RF P+ Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPR 109
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26_MOUSE (40S ribosomal protein S26 OS=Mus musculus GN=Rps26 PE=2 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 8.309e-18 Identity = 41/89 (46.07%), Postives = 50/89 (56.18%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYCXXXXXXXXXXXXXXXXXXXXXEPPQRFMRRDDVPK 269 IRC+NC +C PKDKAIK+F++RNI E AAVRD+ EA V+D Y LPKLY K+ YC PP RF P+ Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPR 109
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26_MACFA (40S ribosomal protein S26 OS=Macaca fascicularis GN=RPS26 PE=3 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 8.309e-18 Identity = 41/89 (46.07%), Postives = 50/89 (56.18%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYCXXXXXXXXXXXXXXXXXXXXXEPPQRFMRRDDVPK 269 IRC+NC +C PKDKAIK+F++RNI E AAVRD+ EA V+D Y LPKLY K+ YC PP RF P+ Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPR 109
BLAST of CX287081 vs. ExPASy Swiss-Prot
Match: RS26_HUMAN (40S ribosomal protein S26 OS=Homo sapiens GN=RPS26 PE=1 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 8.309e-18 Identity = 41/89 (46.07%), Postives = 50/89 (56.18%), Query Frame = 3 Query: 3 IRCSNCGKCCPKDKAIKRFLVRNIAEQAAVRDVQEARVYDGYTLPKLYAKMQYCXXXXXXXXXXXXXXXXXXXXXEPPQRFMRRDDVPK 269 IRC+NC +C PKDKAIK+F++RNI E AAVRD+ EA V+D Y LPKLY K+ YC PP RF P+ Sbjct: 21 IRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPR 109 The following BLAST results are available for this feature:
BLAST of CX287081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287081 ID=CX287081; Name=CX287081; organism=Citrus clementina; type=EST; length=269bpback to top |