CX287098

Overview
NameCX287098
Unique NameCX287098
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287098 vs. ExPASy Swiss-Prot
Match: AGM1_ARATH (Phosphoacetylglucosamine mutase OS=Arabidopsis thaliana GN=DRT101 PE=1 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.381e-69
Identity = 135/198 (68.18%), Postives = 156/198 (78.79%), Query Frame = 2
Query:   11 HLGLEVALAPTGVKFLHEKAAQYDIGIYFEANGHGTILFSEHFLSWLEDKNQELSSTHEG-SEQQKAALRLLAVSKLINQAVGDALSGLLLVETILRHMGWSIHQWNALYQDLPSRQLKVKVGDRXXXXXXXXXXXXXKPPGIQEAINVETAKYRNGRSFIRPSGTEDVVRVYAEASTQEAADKLANSVAELVDRFLG 601
            HLGL+V  A TGVK LHEKAA++DIGIYFEANGHGTILFSE FLSWL  K ++L++  +G SE+ KA  RL+AVS LINQAVGDALSG+LLVE IL+H+GWSI +WN LY+DLPSRQ+KV+V DR             +P GIQ+AIN E  KY  GR+FIRPSGTEDVVRVYAEASTQE AD LANSVA+LV  FLG
Sbjct:  357 HLGLDVVFAKTGVKHLHEKAAEFDIGIYFEANGHGTILFSESFLSWLVSKQKDLTAKGQGGSEEHKAVSRLMAVSNLINQAVGDALSGVLLVEVILQHLGWSIEKWNELYKDLPSRQIKVEVPDRTAVVTTSEETEALRPMGIQDAINSEIKKYSRGRAFIRPSGTEDVVRVYAEASTQEDADSLANSVAQLVKSFLG 554          
BLAST of CX287098 vs. ExPASy Swiss-Prot
Match: AGM1_ORYSJ (Phosphoacetylglucosamine mutase OS=Oryza sativa subsp. japonica GN=Os07g0195400 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.252e-62
Identity = 121/197 (61.42%), Postives = 147/197 (74.62%), Query Frame = 2
Query:   11 HLGLEVALAPTGVKFLHEKAAQYDIGIYFEANGHGTILFSEHFLSWLEDKNQELSSTHEGSEQQKAALRLLAVSKLINQAVGDALSGLLLVETILRHMGWSIHQWNALYQDLPSRQLKVKVGDRXXXXXXXXXXXXXKPPGIQEAINVETAKYRNGRSFIRPSGTEDVVRVYAEASTQEAADKLANSVAELVDRFLG 601
            ++GLEV   PTGVK+LH++A +YDIGIYFEANGHGT+LFS+HF+S LE    E SS   GS Q +AA+RLLA S+LINQAVGDALSG+LLVE +L++ GWS   W  LY DLPSRQLKVKV DR             +P G+QE I+ E + Y +GR F+RPSGTEDVVRVYAEAS++EAAD LA  VA+ V+R LG
Sbjct:  366 NIGLEVVFTPTGVKYLHKEALKYDIGIYFEANGHGTVLFSDHFVSQLESLTSEFSSKAAGSSQHQAAMRLLATSQLINQAVGDALSGMLLVEAVLQYKGWSFQNWCDLYTDLPSRQLKVKVQDRNSIVTTDAERRVCQPNGLQELIDGEISNYSHGRCFVRPSGTEDVVRVYAEASSEEAADCLAKRVAQHVERILG 562          
BLAST of CX287098 vs. ExPASy Swiss-Prot
Match: AGM1_MOUSE (Phosphoacetylglucosamine mutase OS=Mus musculus GN=Pgm3 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.474e-44
Identity = 96/187 (51.34%), Postives = 123/187 (65.78%), Query Frame = 2
Query:   41 TGVKFLHEKAAQYDIGIYFEANGHGTILFSEHFLSWLEDKNQELSSTHEGSEQQKAALRLLAVSKLINQAVGDALSGLLLVETILRHMGWSIHQWNALYQDLPSRQLKVKVGDRXXXXXXXXXXXXXKPPGIQEAINVETAKYRNGRSFIRPSGTEDVVRVYAEASTQEAADKLANSVAELVDRFLG 601
            TGVK LH KA ++DIG+YFEANGHGT LFSE     ++   QEL        + KAA  L ++  L NQA GDA+S +L++E IL   G ++ QW+A+Y DLP+RQLKVKV DR              PPG+QEAIN    KY   R+F+RPSGTED+VRVYAEA++QE+AD+LA  V+ LV +  G
Sbjct:  351 TGVKHLHHKAQEFDIGVYFEANGHGTALFSEAVEVKIKRLAQELDDG-----KGKAARTLASIIDLFNQAAGDAISDMLVIEAILALKGLTVQQWDAIYVDLPNRQLKVKVADRRVISTTDAERQAVTPPGLQEAINDLVKKYTLARAFVRPSGTEDIVRVYAEANSQESADRLAYEVSLLVFQLAG 532          
BLAST of CX287098 vs. ExPASy Swiss-Prot
Match: AGM1_HUMAN (Phosphoacetylglucosamine mutase OS=Homo sapiens GN=PGM3 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.947e-43
Identity = 93/187 (49.73%), Postives = 122/187 (65.24%), Query Frame = 2
Query:   41 TGVKFLHEKAAQYDIGIYFEANGHGTILFSEHFLSWLEDKNQELSSTHEGSEQQKAALRLLAVSKLINQAVGDALSGLLLVETILRHMGWSIHQWNALYQDLPSRQLKVKVGDRXXXXXXXXXXXXXKPPGIQEAINVETAKYRNGRSFIRPSGTEDVVRVYAEASTQEAADKLANSVAELVDRFLG 601
            TGVK LH KA ++DIG+YFEANGHGT LFS      ++   ++L       +++KAA  L  +  L NQA GDA+S +L++E IL   G ++ QW+ALY DLP+RQLKV+V DR              PPG+QEAIN    KY+  R+F+RPSGTEDVVRVYAEA +QE+AD LA+ V+  V +  G
Sbjct:  351 TGVKHLHHKAQEFDIGVYFEANGHGTALFSTAVEMKIKQSAEQLED-----KKRKAAKMLENIIDLFNQAAGDAISDMLVIEAILALKGLTVQQWDALYTDLPNRQLKVQVADRRVISTTDAERQAVTPPGLQEAINDLVKKYKLSRAFVRPSGTEDVVRVYAEADSQESADHLAHEVSLAVFQLAG 532          
BLAST of CX287098 vs. ExPASy Swiss-Prot
Match: AGM1_SCHPO (Probable phosphoacetylglucosamine mutase 1 OS=Schizosaccharomyces pombe GN=SPAC13C5.05c PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.630e-41
Identity = 90/191 (47.12%), Postives = 117/191 (61.26%), Query Frame = 2
Query:   14 LGLEVALAPTGVKFLHEKAAQYDIGIYFEANGHGTILFSEHFLSWLEDKNQELSSTHEGSEQQKAALRLLAVSKLINQAVGDALSGLLLVETILRHMGWSIHQWNALYQDLPSRQLKVKVGDRXXXXXXXXXXXXXKPPGIQEAINVETAKYRNGRSFIRPSGTEDVVRVYAEASTQEAADKLANSVAELV 586
            LG+     PTGVK LH+ A ++DIG+YFEANGHGT+LFS+  L+ L       S     + +Q     L + S LINQA+GDA+S LL   ++L  + W    W+  Y+DLP++  KVKV DR              P G+QE I+   AKY  GRSF+R SGTEDVVRVYAEAST++AAD+L   V +LV
Sbjct:  332 LGITTVFTPTGVKHLHKAAKEFDIGVYFEANGHGTVLFSDKALANLAHPFFTPSPVQAAAIEQ-----LQSYSVLINQAIGDAISDLLATISVLNALHWDASAWSNTYKDLPNKLAKVKVSDRTIYKSTDAERRLVSPDGLQEKIDALVAKYEKGRSFVRASGTEDVVRVYAEASTKQAADELCEKVCQLV 517          
BLAST of CX287098 vs. ExPASy Swiss-Prot
Match: AGM1_CANAL (Phosphoacetylglucosamine mutase OS=Candida albicans GN=AGM1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.797e-35
Identity = 81/195 (41.54%), Postives = 119/195 (61.03%), Query Frame = 2
Query:    5 EGHLGLEVALAPTGVKFLHEKAAQYDIGIYFEANGHGTILFSEHFLSWLEDKNQELSSTHEGSEQQKAALRLLA-VSKLINQAVGDALSGLLLVETILRHMGWSIHQWNALYQDLPSRQLKVKVGDRXXXXXXXXXXXXXKPPGIQEAINVETAKYRNGRSFIRPSGTEDVVRVYAEASTQEAADKLANSVAELV 586
            E  L + V   PTGVK LH +A  +DIG+YFEANGHGT++F+        +  +++      ++ +  A+++L   S+LINQ VGDA+S LL V  ++ ++  S   W+  Y DLP++ +KV V DR             +P G+Q+ I+   A+Y NGRSF+R SGTED VRVYAEA TQ   ++L+ +V+ELV
Sbjct:  356 EDVLKIPVRCTPTGVKHLHHEAENFDIGVYFEANGHGTVIFNP-------EAEKKIFDYKPNNDNEAKAIKVLQNFSQLINQTVGDAISDLLAVLIVVHYLKLSPSDWDNEYTDLPNKLVKVIVPDRSIFKTTNAERTLVEPKGMQDEIDKLVAQYPNGRSFVRASGTEDAVRVYAEADTQNNVEELSKAVSELV 543          
BLAST of CX287098 vs. ExPASy Swiss-Prot
Match: AGM2_SCHPO (Probable phosphoacetylglucosamine mutase 2 OS=Schizosaccharomyces pombe GN=SPAC1296.01c PE=1 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.221e-33
Identity = 81/191 (42.41%), Postives = 110/191 (57.59%), Query Frame = 2
Query:   14 LGLEVALAPTGVKFLHEKAAQYDIGIYFEANGHGTILFSEHFLSWLEDKNQELSSTHEGSEQQKAALRLLAVSKLINQAVGDALSGLLLVETILRHMGWSIHQWNALYQDLPSRQLKVKVGDRXXXXXXXXXXXXXKPPGIQEAINVETAKYRNGRSFIRPSGTEDVVRVYAEASTQEAADKLANSVAELV 586
            L + V     G+K L+  A  YD+G++FEANGHGTIL S   LS +      +S       Q  A   L  V +LINQ  GDA++ LLLVE IL H   ++ +WN LY ++PSR ++ +V DR              P G+QE I+   AKY  GR+F+R SGTED VRVYAEAS++  ++ LA  + EL+
Sbjct:  357 LKVPVLCVSPGLKHLYHAAQAYDVGVFFEANGHGTILVSHAALSKI------ISHEVLSPAQFNALKTLKTVFELINQTDGDAITNLLLVEVILAHKNCTLKEWNQLYSEIPSRLIRCEVEDRSIYTTTDAEQKLVTPEGLQEKIDALVAKYTGGRAFVRSSGTEDAVRVYAEASSRGESEDLALRIVELL 541          
BLAST of CX287098 vs. ExPASy Swiss-Prot
Match: AGM1_YEAST (Phosphoacetylglucosamine mutase OS=Saccharomyces cerevisiae GN=PCM1 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 5.673e-31
Identity = 85/189 (44.97%), Postives = 107/189 (56.61%), Query Frame = 2
Query:   26 VALAPTGVKFLHEKAA-QYDIGIYFEANGHGTILFSEHFLSWLEDKNQELSSTHEGSEQQKAALRLL-AVSKLINQAVGDALSGLLLVETILRHMGWSIHQWNALYQDLPSRQLKVKVGDRXXXXXXXXXXXXXKPPGIQEAINVETAKYRNGRSFIRPSGTEDVVRVYAEASTQEAADKLANSVAELV 586
            V+   TGVK LH +AA QYDIGIYFEANGHGTI+FSE F   ++    ELS +    +    ALR L   S+LINQ VGDA+S +L V   L  +  S   W+  Y DLP++ +K  V DR              P G+Q+ I++  AKY  GRSF+R SGTED VRVYAE        +  + V E V
Sbjct:  370 VSCTKTGVKHLHHEAATQYDIGIYFEANGHGTIIFSEKFHRTIKS---ELSKSKLNGDT--LALRTLKCFSELINQTVGDAISDMLAVLATLAILKMSPMDWDEEYTDLPNKLVKCIVPDRSIFQTTDQERKLLNPVGLQDKIDLVVAKYPMGRSFVRASGTEDAVRVYAECKDSSKLGQFCDEVVEHV 553          
BLAST of CX287098 vs. ExPASy Swiss-Prot
Match: AGM1_ENCCU (Probable phosphoacetylglucosamine mutase OS=Encephalitozoon cuniculi GN=PCM1 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21
Identity = 67/188 (35.64%), Postives = 104/188 (55.32%), Query Frame = 2
Query:   23 EVALAPTGVKFLHEKAAQYDIGIYFEANGHGTILFSEHFLSWLEDKNQELSSTHEGSEQQKAALRLLAVSKLINQAVGDALSGLLLVETILRHMGWSIHQWNALYQDLPSRQLKVKVGDRXXXXXXXXXXXXXKPPGIQEAINVETAKYRNGRSFIRPSGTEDVVRVYAEASTQEAADKLANSVAELV 586
            +V +A TGVK     A ++D+GIYFE NGHG++ FS+  +  +E          +GS +  A L++LA   L +  +GDAL+  ++ + ++      + +    +++ PSR L VK+ D+             +P  +Q+ I+VE      GRSF+RPSGTEDVVRVYAE  ++  AD L   VA+ V
Sbjct:  344 KVVMAQTGVKNFVSAAREFDVGIYFEPNGHGSVCFSQACIDEIE----------KGSTKSHAILKILA--NLFDPCIGDALANFVIFKALMGSAD-DLRK----FRENPSRLLTVKIVDKNSIKVDQKNQVI-EPKELQDKIDVEALSL-GGRSFVRPSGTEDVVRVYAECPSEADADLLCLKVAQHV 512          
The following BLAST results are available for this feature:
BLAST of CX287098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
AGM1_ARATH1.381e-6968.18Phosphoacetylglucosamine mutase OS=Arabidopsis tha... [more]
AGM1_ORYSJ1.252e-6261.42Phosphoacetylglucosamine mutase OS=Oryza sativa su... [more]
AGM1_MOUSE4.474e-4451.34Phosphoacetylglucosamine mutase OS=Mus musculus GN... [more]
AGM1_HUMAN4.947e-4349.73Phosphoacetylglucosamine mutase OS=Homo sapiens GN... [more]
AGM1_SCHPO4.630e-4147.12Probable phosphoacetylglucosamine mutase 1 OS=Schi... [more]
AGM1_CANAL3.797e-3541.54Phosphoacetylglucosamine mutase OS=Candida albican... [more]
AGM2_SCHPO1.221e-3342.41Probable phosphoacetylglucosamine mutase 2 OS=Schi... [more]
AGM1_YEAST5.673e-3144.97Phosphoacetylglucosamine mutase OS=Saccharomyces c... [more]
AGM1_ENCCU5.322e-2135.64Probable phosphoacetylglucosamine mutase OS=Enceph... [more]
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Properties
Property NameValue
Genbank descriptionC01004F09SK Veg1 Citrus clementina cDNA clone C01004F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287098 ID=CX287098; Name=CX287098; organism=Citrus clementina; type=EST; length=705bp
GCACGAGGGACACTTGGGCCTTGAAGTTGCTTTAGCACCAACCGGAGTGA
AATTCTTACATGAGAAAGCTGCTCAGTATGATATTGGGATCTATTTTGAG
GCTAATGGTCATGGCACCATCTTGTTTTCAGAACATTTCTTATCTTGGTT
AGAGGACAAAAATCAAGAGCTTTCTTCCACACATGAAGGTTCTGAACAGC
AAAAAGCTGCTTTGAGACTTTTGGCAGTTAGTAAGTTGATCAACCAAGCT
GTTGGAGATGCTTTGAGTGGTTTGCTCTTGGTGGAGACTATTTTGCGACA
CATGGGGTGGTCAATACATCAATGGAATGCGCTTTATCAGGATCTACCTA
GTAGGCAGCTTAAAGTTAAAGTTGGGGATAGAACCGCTGTTGTTACAGCA
AATGCAGAAACTGTAGCTGTGAAGCCCCCAGGCATTCAAGAAGCCATTAA
TGTTGAAACTGCAAAATATCGTAATGGCCGATCTTTCATACGGCCGTCGG
GCACTGAGGATGTCGTACGTGTATATGCAGAGGCATCCACACAAGAAGCA
GCAGACAAGCTTGCCAACTCTGTAGCCGAACTTGTAGATCGGTTCCTAGG
CTTCAGAAGCTCCTAGTGTCTGGTCTTCTTTCACTGACTAAACATGGCTA
ATTTGAATTGCAGATTTCATATCTTTGATCGATCATTGTGAATGATATTA
ATGAT
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