CX287120

Overview
NameCX287120
Unique NameCX287120
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length485
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287120 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 2.710e-33
Identity = 64/74 (86.49%), Postives = 70/74 (94.59%), Query Frame = 3
Query:   51 TRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPK 272
            TRWAVLVAGS G+ NYRHQADVCHAYQLLRKGGLKEE+I+VFMYDDIA +ELNPRPGVIINHPQGE++Y GVPK
Sbjct:   61 TRWAVLVAGSMGFGNYRHQADVCHAYQLLRKGGLKEENIIVFMYDDIAKNELNPRPGVIINHPQGEDVYAGVPK 134          
BLAST of CX287120 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 3.914e-32
Identity = 64/74 (86.49%), Postives = 69/74 (93.24%), Query Frame = 3
Query:   51 TRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPK 272
            TRWAVLVAGS+GY NYRHQADVCHAYQLL KGGLKEE+IVVFMYDDIA +ELNPR GVIINHP+GE+LY GVPK
Sbjct:   59 TRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGLKEENIVVFMYDDIATNELNPRHGVIINHPEGEDLYAGVPK 132          
BLAST of CX287120 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 3.914e-32
Identity = 63/74 (85.14%), Postives = 69/74 (93.24%), Query Frame = 3
Query:   51 TRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPK 272
            TRWAVLVAGS+GY NYRHQADVCHAYQLL KGG+KEE+IVVFMYDDIA HELNPRPGVIIN+PQG ++Y GVPK
Sbjct:   57 TRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGVKEENIVVFMYDDIATHELNPRPGVIINNPQGPDVYAGVPK 130          
BLAST of CX287120 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 136.346 bits (342), Expect = 6.676e-32
Identity = 61/74 (82.43%), Postives = 67/74 (90.54%), Query Frame = 3
Query:   51 TRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPK 272
            TRWAVLVAGSSGY NYRHQADVCHAYQ+LRKGGLKEE+IVV MYDDIA H LNPRPG +INHP G+++Y GVPK
Sbjct:   50 TRWAVLVAGSSGYGNYRHQADVCHAYQILRKGGLKEENIVVLMYDDIANHPLNPRPGTLINHPDGDDVYAGVPK 123          
BLAST of CX287120 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 3.313e-31
Identity = 61/74 (82.43%), Postives = 68/74 (91.89%), Query Frame = 3
Query:   51 TRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPK 272
            TRWAVLVAGS+GY NYRHQADVCHAYQLL KGG+KEE+IVVFMYDDIA + +NPRPGVIINHPQG ++Y GVPK
Sbjct:   39 TRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGVKEENIVVFMYDDIAYNAMNPRPGVIINHPQGPDVYAGVPK 112          
BLAST of CX287120 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 5.652e-31
Identity = 61/74 (82.43%), Postives = 69/74 (93.24%), Query Frame = 3
Query:   51 TRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPK 272
            T+WAVLVAGSSGY NYRHQADVCHAYQLL+KGG+KEE+IVVFMYDDIA +E NPRPGVIIN P GE++Y+GVPK
Sbjct:   43 TKWAVLVAGSSGYWNYRHQADVCHAYQLLKKGGVKEENIVVFMYDDIAKNEENPRPGVIINSPNGEDVYNGVPK 116          
BLAST of CX287120 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 7.381e-31
Identity = 58/74 (78.38%), Postives = 69/74 (93.24%), Query Frame = 3
Query:   51 TRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPK 272
            TRWAVL+AGS+G+ NYRHQAD+CHAYQLLRKGGLK+E+I+VFMYDDIA +E NPRPGVIINHP G+++Y GVPK
Sbjct:   59 TRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPK 132          
BLAST of CX287120 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 6.249e-30
Identity = 60/74 (81.08%), Postives = 66/74 (89.19%), Query Frame = 3
Query:   51 TRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPK 272
            TRWAVLVAGSSGY NYRHQAD+CHAYQLLRKGGLKEE+IVVFMYDDIA +  NPRPG IIN P G+++Y GVPK
Sbjct:   58 TRWAVLVAGSSGYWNYRHQADICHAYQLLRKGGLKEENIVVFMYDDIANNYENPRPGTIINSPHGKDVYQGVPK 131          
BLAST of CX287120 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.374e-29
Identity = 57/74 (77.03%), Postives = 67/74 (90.54%), Query Frame = 3
Query:   51 TRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPK 272
            TRWA+L+AGS+GY NYRHQ+DVCHAYQLLRKGG KEE+I+VFMYDDIA +E NPRPGVIIN P G+++Y GVPK
Sbjct:   55 TRWAILLAGSNGYWNYRHQSDVCHAYQLLRKGGSKEENIIVFMYDDIASNEENPRPGVIINKPDGDDVYAGVPK 128          
BLAST of CX287120 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.539e-28
Identity = 56/74 (75.68%), Postives = 64/74 (86.49%), Query Frame = 3
Query:   51 TRWAVLVAGSSGYANYRHQADVCHAYQLLRKGGLKEEHIVVFMYDDIAMHELNPRPGVIINHPQGENLYDGVPK 272
            TRWA+L AGSSGY NYRHQAD+CHAYQLLRKGGLK+E+I+VFMYDDIA +  NPR GVIIN P G+ +Y GVPK
Sbjct:   48 TRWAILFAGSSGYWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNSENPRRGVIINSPNGDEVYKGVPK 121          
The following BLAST results are available for this feature:
BLAST of CX287120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
VPE_RICCO2.710e-3386.49Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE_SOYBN3.914e-3286.49Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPE2_PHAVU3.914e-3285.14Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEB_ARATH6.676e-3282.43Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
LEGU_CANEN3.313e-3182.43Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPEA_ARATH5.652e-3182.43Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_CITSI7.381e-3178.38Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPEG_ARATH6.249e-3081.08Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE_VICSA2.374e-2977.03Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPE1_PHAVU1.539e-2875.68Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]

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Properties
Property NameValue
Genbank descriptionC01004H08SK Veg1 Citrus clementina cDNA clone C01004H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287120 ID=CX287120; Name=CX287120; organism=Citrus clementina; type=EST; length=485bp
CGAGGGAGAAGCAAGAACCGCCGGCGGAGGAAGGTGGTGAGCCTGTTGGC
ACTAGATGGGCGGTTCTTGTGGCTGGATCATCTGGCTATGCAAATTACAG
GCATCAGGCCGATGTGTGCCATGCATATCAGTTGCTGAGGAAAGGTGGGT
TGAAAGAAGAGCACATAGTGGTGTTCATGTACGACGACATAGCCATGCAT
GAGCTTAATCCCAGGCCTGGTGTGATCATCAACCATCCACAAGGTGAAAA
TCTTTATGACGGTGTGCCGAAGTTGCTGAATCACAGTGGTTAATTTTCTA
AATCCGGGGGCGGAAGAATCCAGAAAGTTAATCAGTTGGCAGCCTGGCTT
TGGGCTACATCAGCTTTTGAGCAAACAAAGAAACTAACTTCCTTTTTTAT
TTTTTTATTTTTTTATTTTTATTTTTTAATTCCACTTTGCACATACGGCA
TATTCTATGTCACTCTTTCACATGTACAAACACAT
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