CX287206

Overview
NameCX287206
Unique NameCX287206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig39 contig Ccv1_Contig39:1..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y2165_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana GN=At2g16250 PE=1 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 4.238e-87
Identity = 157/234 (67.09%), Postives = 197/234 (84.19%), Query Frame = 2
Query:    2 KKVSLHSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFL-WRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            KK+ +   K E Y+ EL+LFS+  H RLVP LG CLE+E++K LVYK+M  GDLASSL R ++ E D L+SLDWITRLKIA+GAAEGLSYLHHEC+PPLVHRDVQASSILLDDKFEVRLGSLSE +AQGD++Q+ ++R L   Q+S+ S+SG + A C+YDVYCFGKVLLELVTGKLGIS  D+A  +E++E  LP+I+ ++KE++TKI+DPSL++DEDLLEEVWAMAI+A+SC
Sbjct:  555 KKIDVREGKSEGYISELELFSKAGHQRLVPFLGHCLENESQKFLVYKFMRHGDLASSLFRKSENEGDGLKSLDWITRLKIALGAAEGLSYLHHECSPPLVHRDVQASSILLDDKFEVRLGSLSEAYAQGDAYQSRISRLLRLPQSSEPSSSGVTNAICSYDVYCFGKVLLELVTGKLGISSPDNALAKEYMEEALPYISTNEKELVTKILDPSLMVDEDLLEEVWAMAIIAKSC 788          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.532e-28
Identity = 80/233 (34.33%), Postives = 119/233 (51.07%), Query Frame = 2
Query:   17 HSFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLGSLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTR--EWLEHTLPHITLHDKEMLTKIIDPSLI---LDEDLLEEVWAMAIVARSC 700
            H    +S M E+D   +V H  L+ L G  L  + + L++Y+YM  G L   LH V+  E+     LDW  R  +A+G A GL+YLH++C+PP+VHRD++  +IL+D   E  +G         DS  +  T           N+  +      DVY +G VLLELVT K  + KS   +T    W+   L     + ++M+T I+DP L+   LD  L E+V  +  +A SC
Sbjct:  862 HIRANQSMMREIDTIGKVRHRNLIKLEGFWLRKD-DGLMLYRYMPKGSLYDVLHGVSPKEN----VLDWSARYNVALGVAHGLAYLHYDCHPPIVHRDIKPENILMDSDLEPHIGDFGLARLLDDSTVSTATVTGTTGYIAPENAFKTVRGRESDVYSYGVVLLELVTRKRAVDKSFPESTDIVSWVRSALSSSNNNVEDMVTTIVDPILVDELLDSSLREQVMQVTELALSC 1089          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.890e-27
Identity = 78/226 (34.51%), Postives = 121/226 (53.54%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISK---SDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            +M E++   ++ H  LVPLLG C   E E+LLVY+YM  G L + LH  +  +      L+W  R KIAIGAA GL++LHH C P ++HRD+++S++LLD+ FE R+    ++ L +  D+H +V T              S   T   DVY +G +LLEL++GK  I      +D     W +       L+ ++   +I+DP L+ D+    E++    +A  C
Sbjct:  900 FMAEMETIGKIKHRNLVPLLGYCKVGE-ERLLVYEYMKWGSLETVLHEKSSKKGGIY--LNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDEDFEARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPGEFGEDNNLVGWAKQ------LYREKRGAEILDPELVTDKSGDVELFHYLKIASQC 1116          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.098e-26
Identity = 85/224 (37.95%), Postives = 119/224 (53.12%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSG-SSAATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            +  E++  SR  H  LV LLG C  ++ +KLL+Y YM  G L   LH   D       SLDW TRL+IA GAAEGL+YLH  C P ++HRD+++S+ILL D F   L    L+ L    D+H  V T  +          G +S AT   DVY FG VLLEL+TG+  +       +R+ +   L    +  ++  ++I DP  I D+D  EE+  +  +A  C
Sbjct:  784 FQAEVETLSRAQHPNLVHLLGYC-NYKNDKLLIYSYMDNGSLDYWLHEKVD----GPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTH--VTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISWVL---QMKTEKRESEIFDP-FIYDKDHAEEMLLVLEIACRC 996          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.446e-26
Identity = 84/232 (36.21%), Postives = 117/232 (50.43%), Query Frame = 2
Query:   20 SFKKESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSD---DATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            S     ++ E+ L SR+ H  LVPL+G C E    ++LVY+YM  G L   LH  +D +      LDW+TRL+IA  AA+GL YLH  CNP ++HRDV++S+ILLD     ++    LS    +  +H + + +       D     S   T   DVY FG VL EL++GK  +S  D   +     W        +L  K  +  IIDP  I     +E VW +A VA  C
Sbjct:  641 SHLNRQFVTEVALLSRIHHRNLVPLIGYC-EEADRRILVYEYMHNGSLGDHLHGSSDYKP-----LDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVAKGTVGYL-DPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIVHWAR------SLIRKGDVCGIIDP-CIASNVKIESVWRVAEVANQC 858          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.446e-26
Identity = 75/213 (35.21%), Postives = 117/213 (54.93%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSD--DATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLE 664
            +M E++   ++ H  LVPLLG C   + E+LLVY++M  G L   LH   D +   ++ L+W TR KIAIG+A GL++LHH C+P ++HRD+++S++LLD+  E R+    ++ L +  D+H +V T              S   +   DVY +G VLLEL+TGK      D  D     W++        H K  ++ + DP L+ ++  LE
Sbjct:  924 FMAEMETIGKIKHRNLVPLLGYCKVGD-ERLLVYEFMKYGSLEDVLH---DPKKAGVK-LNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSPDFGDNNLVGWVKQ-------HAKLRISDVFDPELMKEDPALE 1124          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26
Identity = 73/165 (44.24%), Postives = 98/165 (59.39%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGK 526
            +M E++   +V H  LV LLG C   E EKLLVY+YMV G L   L   T +    L+ LDW  RLKIA+GAA GL++LHH   P ++HRD++AS+ILLD  FE ++    L+ L +  +SH + +    +          S+ AT   DVY FG +LLELVTGK
Sbjct:  958 FMAEMETLGKVKHPNLVSLLGYCSFSE-EKLLVYEYMVNGSLDHWLRNQTGM----LEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQ-SARATTKGDVYSFGVILLELVTGK 1116          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26
Identity = 79/226 (34.96%), Postives = 117/226 (51.77%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISK---SDDATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            +M E++   ++ H  LVPLLG C   E E+LLVY+YM  G L + LH  T      L   DW  R KIAIGAA GL++LHH C P ++HRD+++S++LLD  F  R+    ++ L +  D+H +V T              S   T   DVY +G +LLEL++GK  I      +D     W +       L+ ++   +I+DP L+ D+    E+     +A  C
Sbjct:  899 FMAEMETIGKIKHRNLVPLLGYCKIGE-ERLLVYEYMKYGSLETVLHEKTKKGGIFL---DWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPEEFGEDNNLVGWAKQ------LYREKRGAEILDPELVTDKSGDVELLHYLKIASQC 1114          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26
Identity = 84/236 (35.59%), Postives = 130/236 (55.08%), Query Frame = 2
Query:   29 KESYMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSD-----ASNSGSSAATCAYDVYCFGKVLLELVTGKLGIS----KSDDATTREWLEHTLPHIT-LHDKEMLTKIIDPSLILDEDLLEEVWAMAIVARSC 700
            ++ +  E+     V +  LVPLLG C+ ++ E+LL+Y+YM  G L   LH     +++S + LDW +RLKIAIG A+GL++LHH CNP ++HR++ +  ILL  +FE ++    L+ L    D+H   L+ F+  +  D        S +  AT   DVY FG VLLELVTG+   S      + A    +  + +  IT L  +  L + ID SL L   + +E++ +  VA +C
Sbjct:  340 EKEFDAEMKTLGSVKNRNLVPLLGYCVANK-ERLLMYEYMANGYLYDQLHPA---DEESFKPLDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRNISSKCILLTAEFEPKISDFGLARLMNPIDTH---LSTFVNGEFGDFGYVAPEYSRTMVATPKGDVYSFGVVLLELVTGQKATSVTKVSEEKAEEENFKGNLVEWITKLSSESKLQEAIDRSL-LGNGVDDEIFKVLKVACNC 567          
BLAST of CX287206 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.117e-26
Identity = 76/213 (35.68%), Postives = 114/213 (53.52%), Query Frame = 2
Query:   38 YMMELDLFSRVSHARLVPLLGQCLEHETEKLLVYKYMVCGDLASSLHRVTDLEDDSLQSLDWITRLKIAIGAAEGLSYLHHECNPPLVHRDVQASSILLDDKFEVRLG--SLSELHAQGDSHQNVLTRFLWRQTSDASNSGSSAATCAYDVYCFGKVLLELVTGKLGISKSD--DATTREWLEHTLPHITLHDKEMLTKIIDPSLILDEDLLE 664
            +  E++   ++ H  LVPLLG C   E E+LLVY+YM  G L   LH   D +   ++ L+W  R KIAIGAA GL++LHH C P ++HRD+++S++LLD+  E R+    ++ L +  D+H +V T              S   +   DVY +G VLLEL+TGK     +D  D     W       + LH K  +T + D  L+ ++  +E
Sbjct:  929 FTAEMETIGKIKHRNLVPLLGYCKVGE-ERLLVYEYMKYGSLEDVLH---DRKKTGIK-LNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTDSADFGDNNLVGW-------VKLHAKGKITDVFDRELLKEDASIE 1129          
The following BLAST results are available for this feature:
BLAST of CX287206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
Y2165_ARATH4.238e-8767.09Probable LRR receptor-like serine/threonine-protei... [more]
PEPR1_ARATH1.532e-2834.33Leucine-rich repeat receptor-like protein kinase P... [more]
BRL1_ARATH2.890e-2734.51Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
PSKR1_DAUCA1.098e-2637.95Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
Y1677_ARATH2.446e-2636.21Probable LRR receptor-like serine/threonine-protei... [more]
BRI1_ARATH2.446e-2635.21Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
EXS_ARATH5.449e-2644.24Leucine-rich repeat receptor protein kinase EXS OS... [more]
BRL3_ARATH5.449e-2634.96Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
Y5838_ARATH7.117e-2635.59Probably inactive leucine-rich repeat receptor-lik... [more]
BRI1_SOLPE7.117e-2635.68Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]

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Properties
Property NameValue
Genbank descriptionC01005H06SK Veg1 Citrus clementina cDNA clone C01005H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287206 ID=CX287206; Name=CX287206; organism=Citrus clementina; type=EST; length=700bp
AAAAAAGGTCAGTCTGCATTCGTTCAAGAAAGAATCATACATGATGGAAT
TAGATTTGTTCAGCAGAGTTTCACATGCAAGACTGGTGCCACTTTTAGGC
CAATGCTTGGAGCATGAGACAGAGAAACTTTTGGTCTACAAATATATGGT
ATGTGGAGATTTGGCTAGTTCCTTGCACAGGGTTACAGATTTGGAGGATG
ACAGTTTACAATCCCTAGATTGGATTACAAGATTGAAAATTGCAATTGGT
GCGGCGGAAGGTTTATCCTACCTACATCATGAGTGTAACCCTCCTCTTGT
TCACAGAGATGTTCAAGCCAGCAGTATCCTTCTCGATGATAAATTTGAAG
TTCGACTTGGAAGCTTGAGTGAGCTTCATGCTCAAGGAGATTCACACCAA
AATGTGCTAACGAGATTTTTGTGGAGACAAACCTCTGATGCAAGCAATTC
AGGCTCCTCCGCGGCAACTTGTGCCTATGATGTGTACTGCTTTGGAAAAG
TCCTACTTGAGCTTGTAACTGGCAAGCTTGGTATTAGCAAATCAGATGAT
GCTACTACACGAGAGTGGTTGGAACATACACTACCTCACATCACTTTACA
CGACAAGGAAATGTTGACCAAGATCATCGACCCATCTCTGATTCTAGATG
AGGATCTACTGGAAGAAGTATGGGCCATGGCAATTGTAGCCAGATCATGC
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