CX287209

Overview
NameCX287209
Unique NameCX287209
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length675
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287209 vs. ExPASy Swiss-Prot
Match: CAMT3_ARATH (Probable caffeoyl-CoA O-methyltransferase At4g26220 OS=Arabidopsis thaliana GN=At4g26220 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.871e-29
Identity = 72/161 (44.72%), Postives = 98/161 (60.87%), Query Frame = 3
Query:  204 LYDYILRNV---REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNG-EASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 674
            LY YIL      REPE+LR+LR  T     + M  +PD  QL+ ML+ ++ A++ IEVGV+TGYS L  AL LPE G ++A + +  S E+     ++AGV HK+  K   A  +L  L+ N      +DFAFVDA+K  Y  Y E L++LI+VGGIIV D
Sbjct:   15 LYKYILETSVYPREPEVLRELRNITHNHPQAGMATAPDAGQLMGMLLNLVNARKTIEVGVFTGYSLLLTALTLPEDGKVIAIDMNRDSYEIGLPVIKKAGVEHKIDFKESEALPALDELLNNKVNEGGFDFAFVDADKLNYWNYHERLIRLIKVGGIIVYD 175          
BLAST of CX287209 vs. ExPASy Swiss-Prot
Match: CAMT2_MAIZE (Caffeoyl-CoA O-methyltransferase 2 OS=Zea mays GN=CCOAOMT2 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.417e-28
Identity = 71/161 (44.10%), Postives = 100/161 (62.11%), Query Frame = 3
Query:  204 LYDYILRNV---REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA-SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 674
            LY YIL      REPE +++LRE TA    + M  S D+ Q L ML++++GA++ +E+GVYTGYS LA AL LPE G ++A + +  + E+      +AGV HK+  + G A   L  L+ + E   S+DFAFVDA+K  Y  Y E LL+L+R GG+I  D
Sbjct:   46 LYQYILDTSVYPREPESMKELREITAKHPWNLMTTSADEGQFLNMLIKLIGAKKTMEIGVYTGYSLLATALALPEDGTILAMDINRENYELGLPCINKAGVGHKIDFREGPALPVLDDLVADKEQHGSFDFAFVDADKDNYLNYHERLLKLVRPGGLIGYD 206          
BLAST of CX287209 vs. ExPASy Swiss-Prot
Match: CAMT1_MAIZE (Caffeoyl-CoA O-methyltransferase 1 OS=Zea mays GN=CCOAOMT1 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.417e-28
Identity = 70/161 (43.48%), Postives = 101/161 (62.73%), Query Frame = 3
Query:  204 LYDYILRNV---REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE-ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 674
            LY YIL      REPE +++LRE TA    + M  S D+ Q L ML++++GA++ +E+GVYTGYS LA AL LPE G ++A + +  + E+     E+AGV+HK+  + G A   L  LI   +   S+DF FVDA+K  Y  Y E LL+L+++GG+I  D
Sbjct:   40 LYQYILDTSVYPREPESMKELREVTAKHPWNLMTTSADEGQFLNMLIKLIGAKKTMEIGVYTGYSLLATALALPEDGTILAMDINRENYELGLPCIEKAGVAHKIDFREGPALPVLDDLIAEEKNHGSFDFVFVDADKDNYLNYHERLLKLVKLGGLIGYD 200          
BLAST of CX287209 vs. ExPASy Swiss-Prot
Match: CAMT4_TOBAC (Caffeoyl-CoA O-methyltransferase 4 OS=Nicotiana tabacum GN=CCOAOMT4 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.567e-27
Identity = 65/161 (40.37%), Postives = 102/161 (63.35%), Query Frame = 3
Query:  204 LYDYILRNV---REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE-ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 674
            LY YIL      REPE +++LRE TA    + M  S D+ Q L+ML++++ A+  +E+GV+TGYS LA A+ LP+ G ++A + +  + E+     E+AG++HK++ K G A   L  +I +G+   SYDF FVDA+K  Y  Y + L+ L+++GG+I  D
Sbjct:   24 LYQYILETSVYPREPEPMKELREITAKHPWNLMTTSADEGQFLSMLIKLINAKNTMEIGVFTGYSLLATAMALPDDGKILAMDINRENYEIGLPVIEKAGLAHKIEFKEGPALPVLDQMIEDGKYHGSYDFIFVDADKDNYLNYHKRLIDLVKIGGLIGYD 184          
BLAST of CX287209 vs. ExPASy Swiss-Prot
Match: CAMT2_ARATH (Probable caffeoyl-CoA O-methyltransferase At1g67990 OS=Arabidopsis thaliana GN=At1g67990 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.567e-27
Identity = 69/164 (42.07%), Postives = 102/164 (62.20%), Query Frame = 3
Query:  204 LYDYILRNV---REPEILRQLREETAGMRG--SQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKAL--ILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 674
            L  YI+      RE E+L++LRE T    G  S+M V  D++  L+MLV+I+ A+  IE+GV+TGYS   +AL LPE G + A + D     +  ++ ++AGV HK+     + +D+++ L  +LNGE   YDFAFVDA+K  Y  + E LL+L++VGGII  D
Sbjct:   16 LKQYIMETTAYPREHELLKELREATIQRYGNLSEMGVPVDESLFLSMLVKIINAKNTIEIGVFTGYSLFTVALALPEDGRITAIDIDQAGYNLGLEFMKKAGVDHKINF---IQSDAVRGLDQLLNGEKQEYDFAFVDADKTNYVYFLEKLLKLVKVGGIIAFD 176          
BLAST of CX287209 vs. ExPASy Swiss-Prot
Match: CAMT1_TOBAC (Caffeoyl-CoA O-methyltransferase 1 OS=Nicotiana tabacum GN=CCOAOMT1 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.567e-27
Identity = 65/161 (40.37%), Postives = 102/161 (63.35%), Query Frame = 3
Query:  204 LYDYILRNV---REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE-ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 674
            LY YIL      REPE +++LRE TA    + M  S D+ Q L+ML++++ A+  +E+GV+TGYS LA A+ LP+ G ++A + +  + E+     E+AG++HK++ K G A   L  +I +G+   SYDF FVDA+K  Y  Y + L+ L+++GG+I  D
Sbjct:   21 LYQYILETSVYPREPEPMKELREITAKHPWNLMTTSADEGQFLSMLIKLINAKNTMEIGVFTGYSLLATAMALPDDGKILAMDINRENYEIGLPVIEKAGLAHKIEFKEGPALPVLDQMIEDGKYHGSYDFIFVDADKDNYLNYHKRLIDLVKIGGLIGYD 181          
BLAST of CX287209 vs. ExPASy Swiss-Prot
Match: CAMT1_POPTR (Caffeoyl-CoA O-methyltransferase 1 OS=Populus trichocarpa GN=CCOAOMT1 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.047e-27
Identity = 67/161 (41.61%), Postives = 101/161 (62.73%), Query Frame = 3
Query:  204 LYDYILRNV---REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA-SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 674
            LY YIL      REPE +++LRE TA    + M  S D+ Q L ML++++ A+  +E+GVYTGYS LA AL +PE G ++A + +  + E+     ++AGV+HK+  K G A   L  +I +G+   S+DF FVDA+K  Y  Y + L++L++VGG+I  D
Sbjct:   29 LYQYILETSVYPREPECMKELREVTAKHPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFKEGPALPVLDQMIEDGKCHGSFDFIFVDADKDNYINYHKRLIELVKVGGLIGYD 189          
BLAST of CX287209 vs. ExPASy Swiss-Prot
Match: CAMT_POPTM (Caffeoyl-CoA O-methyltransferase OS=Populus tremuloides PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.491e-27
Identity = 67/161 (41.61%), Postives = 101/161 (62.73%), Query Frame = 3
Query:  204 LYDYILRNV---REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE-ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 674
            LY YIL      REPE +++LRE TA    + M  S D+ Q L ML++++ A+  +E+GVYTGYS LA AL +PE G ++A + +  + E+     ++AGV+HK+  K G A   L  +I +G+   S+DF FVDA+K  Y  Y + L++L++VGG+I  D
Sbjct:   29 LYQYILETSVYPREPECMKELREVTAKHPWNIMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFKEGPALPVLDQMIEDGKYHGSFDFIFVDADKDNYINYHKRLIELVKVGGLIGYD 189          
BLAST of CX287209 vs. ExPASy Swiss-Prot
Match: CAMT_VITVI (Caffeoyl-CoA O-methyltransferase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.559e-27
Identity = 68/161 (42.24%), Postives = 100/161 (62.11%), Query Frame = 3
Query:  204 LYDYILRNV---REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE-ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 674
            LY YIL      REPE +++LRE TA    + M  S D+ Q L ML++++ A+  +E+GVYTGYS LA AL LP+ G ++A + +  + E+     ++AGV+HK+  K G A   L  +I +G+   S+DF FVDA+K  Y  Y + L+ L++VGGII  D
Sbjct:   24 LYQYILETSVYPREPESMKELRELTAQHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPDDGKILAMDINKENYELGLPVIQKAGVAHKIDFKEGPALPVLDQMIEDGKYHGSFDFIFVDADKDNYLNYHKRLIDLVKVGGIIGYD 184          
BLAST of CX287209 vs. ExPASy Swiss-Prot
Match: CAMT3_TOBAC (Caffeoyl-CoA O-methyltransferase 3 OS=Nicotiana tabacum GN=CCOAOMT3 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 4.559e-27
Identity = 66/161 (40.99%), Postives = 102/161 (63.35%), Query Frame = 3
Query:  204 LYDYILRNV---REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE-ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 674
            LY YIL      REPE +++LRE TA    + M  S D+ Q L+ML++++ A+  +E+GV+TGYS LA A+ LP+ G ++A + +  + E+     E+AG++HK++ K G A   L  +I +G+   SYDF FVDA+K  Y  Y + L+ L++VGG+I  D
Sbjct:   24 LYQYILETSVYPREPEPMKELREITAKHPWNIMTTSADEGQFLSMLLKLINAKNTMEIGVFTGYSLLATAMALPDDGKILAMDINRDNYEIGLPVIEKAGLAHKIEFKEGPALPVLDQMIEDGKYHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGLIGYD 184          
The following BLAST results are available for this feature:
BLAST of CX287209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
CAMT3_ARATH4.871e-2944.72Probable caffeoyl-CoA O-methyltransferase At4g2622... [more]
CAMT2_MAIZE1.417e-2844.10Caffeoyl-CoA O-methyltransferase 2 OS=Zea mays GN=... [more]
CAMT1_MAIZE2.417e-2843.48Caffeoyl-CoA O-methyltransferase 1 OS=Zea mays GN=... [more]
CAMT4_TOBAC1.567e-2740.37Caffeoyl-CoA O-methyltransferase 4 OS=Nicotiana ta... [more]
CAMT2_ARATH1.567e-2742.07Probable caffeoyl-CoA O-methyltransferase At1g6799... [more]
CAMT1_TOBAC1.567e-2740.37Caffeoyl-CoA O-methyltransferase 1 OS=Nicotiana ta... [more]
CAMT1_POPTR2.047e-2741.61Caffeoyl-CoA O-methyltransferase 1 OS=Populus tric... [more]
CAMT_POPTM3.491e-2741.61Caffeoyl-CoA O-methyltransferase OS=Populus tremul... [more]
CAMT_VITVI4.559e-2742.24Caffeoyl-CoA O-methyltransferase OS=Vitis vinifera... [more]
CAMT3_TOBAC4.559e-2740.99Caffeoyl-CoA O-methyltransferase 3 OS=Nicotiana ta... [more]

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Properties
Property NameValue
Genbank descriptionC01005H09SK Veg1 Citrus clementina cDNA clone C01005H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287209 ID=CX287209; Name=CX287209; organism=Citrus clementina; type=EST; length=675bp
GCTTGGTGGCGAATCGTTTTGCTTTTGTTTTACTGAAAACTGAAAAAACG
GTTGCCAAATTCCATTCCTTTCCCTTATCTGAAAGATTGAGATTGAGACC
CTGCAAGTTTAAGACTAAGAATCAGTTCACCACAAACTGCTGTGTTTCCT
CTGCCCATGACGAAAAGTACAGCAACAAGCAAGTCATCAGTGTAACTCCT
CCCCTTTACGACTACATCCTCCGAAATGTTCGTGAGCCCGAGATTTTGCG
TCAACTGCGGGAAGAGACTGCTGGTATGCGTGGTAGCCAGATGCAGGTTT
CGCCAGATCAAGCACAGCTACTTGCAATGCTTGTACAGATTCTCGGTGCA
CAACGGTGTATAGAAGTTGGTGTGTATACTGGATACTCATCATTGGCTAT
TGCACTAGTGCTGCCGGAATCTGGTTGTCTTGTTGCTTGTGAAAGAGATG
CCAGGTCTCTTGAGGTTGCAAAAAAGTATTATGAGCGAGCTGGTGTTTCG
CATAAGGTAAAAATTAAGCATGGATTAGCAGCAGATTCCCTAAAAGCTCT
GATTTTGAATGGCGAAGCTTCCAGCTATGATTTTGCATTTGTTGATGCTG
AAAAAAGGATGTACCAGGAGTACTTTGAATTGTTGCTGCAACTGATCAGA
GTTGGGGGAATCATCGTAATTGATA
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