CX287222

Overview
NameCX287222
Unique NameCX287222
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length504
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX287222 vs. ExPASy Swiss-Prot
Match: EXOC2_ARATH (Exocyst complex component 2 OS=Arabidopsis thaliana GN=SEC5A PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 9.706e-32
Identity = 63/81 (77.78%), Postives = 75/81 (92.59%), Query Frame = 2 
Query:    2 QWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLEVVY 244
            QWG+AP VKG+RD AVELLHTLVAVHAEVFAGAKPLLDK LG+L+EGLIDTFLS+ +EN+S++L+S+DANGFCQLM E+ Y
Sbjct:  871 QWGSAPQVKGIRDAAVELLHTLVAVHAEVFAGAKPLLDKILGVLIEGLIDTFLSVVEENRSSDLRSIDANGFCQLMFELEY 951
The following BLAST results are available for this feature:
BLAST of CX287222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
EXOC2_ARATH9.706e-3277.78Exocyst complex component 2 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionC01006B01SK Veg1 Citrus clementina cDNA clone C01006B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287222 ID=CX287222; Name=CX287222; organism=Citrus clementina; type=EST; length=504bp
TCAATGGGGAGCGGCACCGGCAGTCAAAGGTGTGCGTGATGTAGCTGTGG
AATTATTGCACACACTGGTAGCCGTACATGCAGAGGTCTTTGCTGGTGCT
AAGCCCCTCTTAGACAAGACACTTGGCATTCTTGTGGAAGGTCTGATTGA
CACATTTCTTAGCCTGTTTGATGAAAACCAATCCAATAATCTTAAGTCAC
TTGATGCAAATGGTTTCTGCCAGCTCATGCTCGAGGTAGTATACAATGTT
CTTATTTCCTCTCTGAAGAGGTCTTGTATCCAACTGTTGATATTCTCGAA
AATCCTTCTAGCAGTTGTTACTCATAGCTCTACAGTAATGGAAAGTTCAA
AACAGATGGGGGTCAAGATGAATCGGGAGCAGTAATGCTGCTTGTGTTTT
TTATTTTGCTTCATTTGTTCTGAACTCTGCTAGCATATTTATTCTTATGA
GATTTCCTTGCTGATTGTGCACTTAGAAAAGAAAAGTTATAATTAAATGG
AAAA
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