CX287224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287224 vs. ExPASy Swiss-Prot
Match: ELOC_RAT (Transcription elongation factor B polypeptide 1 OS=Rattus norvegicus GN=Tceb1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.894e-18 Identity = 44/92 (47.83%), Postives = 63/92 (68.48%), Query Frame = 3 Query: 117 VKLISAEGFEFVISKEAAMVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYWSLQYSRGKE--TDFHIEPELTLELMMAANYL 386 VKLIS++G EF++ +E A+ S TI+ ML+ PG FAE E EV F EI + +L K+C YF + ++Y+ +F I PE+ LEL+MAAN+L Sbjct: 19 VKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFL 110
BLAST of CX287224 vs. ExPASy Swiss-Prot
Match: ELOC_MOUSE (Transcription elongation factor B polypeptide 1 OS=Mus musculus GN=Tceb1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.894e-18 Identity = 44/92 (47.83%), Postives = 63/92 (68.48%), Query Frame = 3 Query: 117 VKLISAEGFEFVISKEAAMVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYWSLQYSRGKE--TDFHIEPELTLELMMAANYL 386 VKLIS++G EF++ +E A+ S TI+ ML+ PG FAE E EV F EI + +L K+C YF + ++Y+ +F I PE+ LEL+MAAN+L Sbjct: 19 VKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFL 110
BLAST of CX287224 vs. ExPASy Swiss-Prot
Match: ELOC_HUMAN (Transcription elongation factor B polypeptide 1 OS=Homo sapiens GN=TCEB1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.894e-18 Identity = 44/92 (47.83%), Postives = 63/92 (68.48%), Query Frame = 3 Query: 117 VKLISAEGFEFVISKEAAMVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYWSLQYSRGKE--TDFHIEPELTLELMMAANYL 386 VKLIS++G EF++ +E A+ S TI+ ML+ PG FAE E EV F EI + +L K+C YF + ++Y+ +F I PE+ LEL+MAAN+L Sbjct: 19 VKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFL 110
BLAST of CX287224 vs. ExPASy Swiss-Prot
Match: ELOC_BOVIN (Transcription elongation factor B polypeptide 1 OS=Bos taurus GN=TCEB1 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.894e-18 Identity = 44/92 (47.83%), Postives = 63/92 (68.48%), Query Frame = 3 Query: 117 VKLISAEGFEFVISKEAAMVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYWSLQYSRGKE--TDFHIEPELTLELMMAANYL 386 VKLIS++G EF++ +E A+ S TI+ ML+ PG FAE E EV F EI + +L K+C YF + ++Y+ +F I PE+ LEL+MAAN+L Sbjct: 19 VKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFL 110
BLAST of CX287224 vs. ExPASy Swiss-Prot
Match: ELOC_SCHPO (Elongin-C OS=Schizosaccharomyces pombe GN=elc1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 6.615e-15 Identity = 40/95 (42.11%), Postives = 63/95 (66.32%), Query Frame = 3 Query: 105 KEDTVKLISAEGFEFVISKEAAMVSQTIRNMLTSPGGFAETEHGEVTFPEISTTILEKICQYFYWSLQYSRGKE-TDFHIEPELTLELMMAANYL 386 +++ V+LIS +GF F++ KE A +S TIR +L G F+E + E TFP+I T+LEK+C+Y +++ +Y + F I PE+ LEL++ A YL Sbjct: 2 EKEYVRLISGDGFVFILEKEIACLSGTIRAILNE-GIFSEAQKNECTFPDIRATLLEKVCEYLHYNYRYKNQLDIPKFDIPPEMVLELLVTAEYL 95
BLAST of CX287224 vs. ExPASy Swiss-Prot
Match: ELOC_DICDI (Transcription elongation factor B polypeptide 1 OS=Dictyostelium discoideum GN=tceb1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.379e-12 Identity = 37/97 (38.14%), Postives = 64/97 (65.98%), Query Frame = 3 Query: 111 DTVKLISAEGFEFVISKEAAMVSQTIRNMLTSPGG-FAETEHGEVTFPEISTTILEKICQYFYWSLQYSRGKE--TDFHIEPELTLELMMAANYLHT 392 D ++L S+ G EFV+S++ + VS TI++ML+ F E ++ E+ F EIST +LEK+ QYFY+ +Y+ +F I ++ ++L++AA++L T Sbjct: 13 DVLRLYSSTGHEFVLSRKMSYVSGTIKSMLSGDNSNFMEDQNNEIRFREISTPVLEKVIQYFYFKNKYTNSTTDLPEFPINEKVVVDLLLAAHFLDT 109 The following BLAST results are available for this feature:
BLAST of CX287224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287224 ID=CX287224; Name=CX287224; organism=Citrus clementina; type=EST; length=517bpback to top |