CX287225

Overview
NameCX287225
Unique NameCX287225
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length472
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX287225 vs. ExPASy Swiss-Prot
Match: ITPK2_ARATH (Inositol-tetrakisphosphate 1-kinase 2 OS=Arabidopsis thaliana GN=ITPK2 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 3.248e-28
Identity = 60/89 (67.42%), Postives = 67/89 (75.28%), Query Frame = 1 
Query:  109 AASADDADLDPCVAXXXXXXXXXXXXXXXXXXXGLRLFNLDIIREHGTRDQFYVIDINYFPGYGKMPEYEHIFTDFLLSLTQSRYKKKS 375
            AASADDADLDP +A                   GLRLFNLDIIREHGTRD+FYVIDINYFPGYGKMPEYEH+FTDFLLS+ QS+ KK++
Sbjct:  260 AASADDADLDPSIAELPPRPLLERLAKELRRGLGLRLFNLDIIREHGTRDRFYVIDINYFPGYGKMPEYEHVFTDFLLSVVQSQCKKRA 348
[Close]
BLAST of CX287225 vs. ExPASy Swiss-Prot
Match: ITPK3_ARATH (Inositol-tetrakisphosphate 1-kinase 3 OS=Arabidopsis thaliana GN=ITPK3 PE=2 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 3.478e-22
Identity = 49/88 (55.68%), Postives = 61/88 (69.32%), Query Frame = 1 
Query:  109 AASADDADLDPCVAXXXXXXXXXXXXXXXXXXXGLRLFNLDIIREHGTRDQFYVIDINYFPGYGKMPEYEHIFTDFLLSLTQSRYKKK 372
            AASAD+ADLDP VA                   GLRLFN+D+IREHG+++ FYVIDINYFPGYGK+P+YE +F DF  +L Q +YKK+
Sbjct:  300 AASADNADLDPRVAELPPKPFLEALVKELRSLLGLRLFNIDMIREHGSKNVFYVIDINYFPGYGKLPDYEQVFVDFFQNLAQVKYKKR 387
The following BLAST results are available for this feature:
BLAST of CX287225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ITPK2_ARATH3.248e-2867.42Inositol-tetrakisphosphate 1-kinase 2 OS=Arabidops... [more]
ITPK3_ARATH3.478e-2255.68Inositol-tetrakisphosphate 1-kinase 3 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionC01006B04SK Veg1 Citrus clementina cDNA clone C01006B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287225 ID=CX287225; Name=CX287225; organism=Citrus clementina; type=EST; length=472bp
ATTCGAAGACGCTCCAACTTAATGCCTATGAGCACTTCTTGATTGAATTT
CATCTCTGCTTTTGCATTTTTATATTGAGTTATTCCTCGTGCCGAATTCG
GCACGAGGGCAGCTTCTGCAGATGATGCTGATTTGGACCCTTGTGTTGCT
GAGCTTCCTCCGCGACCTTTATTAGAGAGACTTGCAAAGGAACTTCGTCG
TCAACTGGGTCTACGGCTGTTCAATCTGGATATTATCAGAGAACATGGGA
CCAGAGATCAATTTTATGTCATTGACATTAACTACTTCCCTGGGTATGGG
AAAATGCCGGAGTACGAGCACATATTTACAGACTTTCTATTAAGCCTGAC
ACAGAGCCGGTACAAGAAAAAATCCTGCTGAGTGACTGTTGAAGGACTTT
GTTGTGGTTAAGCAGTGGGGCACCATCTCGGAGAATGATAATATGGTCTC
AGTTTAGTAATAGCACGACAAG
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