CX287254
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: UPL2_ARATH (E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana GN=UPL2 PE=1 SV=2) HSP 1 Score: 269.24 bits (687), Expect = 6.973e-72 Identity = 129/164 (78.66%), Postives = 145/164 (88.41%), Query Frame = 1 Query: 1 VVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492 +VA+H LT+AIRPQINAFLEG ELIP EL+SIFNDKELELLISGLP+ID DD++ANTEY+ Y+ SPVI+WFWEVV+ FSKED AR LQFVTGTSKVPLEGF ALQGISG Q+ QIHKAYGS + LPSAHTCFNQLDLPEY SK+ ++ERLLLAIHE NEGFG Sbjct: 3493 LVADHILTSAIRPQINAFLEGLNELIPRELVSIFNDKELELLISGLPEIDFDDLKANTEYTSYTVGSPVIRWFWEVVKAFSKEDMARFLQFVTGTSKVPLEGFKALQGISGPQRLQIHKAYGSPERLPSAHTCFNQLDLPEYQSKEQVQERLLLAIHEANEGFG 3656
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: UPL1_ARATH (E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana GN=UPL1 PE=1 SV=3) HSP 1 Score: 268.855 bits (686), Expect = 9.107e-72 Identity = 130/164 (79.27%), Postives = 144/164 (87.80%), Query Frame = 1 Query: 1 VVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492 +VA H LT AIRPQINAFLEGF ELIP EL+SIFNDKELELLISGLP+ID DD++ANTEY+ Y+A SPVI WFWEVV+ FSKED AR LQFVTGTSKVPLEGF ALQGISG Q+ QIHKAYG+ + LPSAHTCFNQLDLPEY SK+ L+ERLLLAIHE +EGFG Sbjct: 3516 LVAGHILTNAIRPQINAFLEGFNELIPRELVSIFNDKELELLISGLPEIDFDDLKANTEYTSYTAGSPVIHWFWEVVKAFSKEDMARFLQFVTGTSKVPLEGFKALQGISGPQRLQIHKAYGAPERLPSAHTCFNQLDLPEYQSKEQLQERLLLAIHEASEGFG 3679
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: TOM1_NEUCR (E3 ubiquitin-protein ligase TOM1-like OS=Neurospora crassa GN=B11B22.010 PE=3 SV=3) HSP 1 Score: 216.853 bits (551), Expect = 4.107e-56 Identity = 101/164 (61.59%), Postives = 129/164 (78.66%), Query Frame = 1 Query: 1 VVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492 ++ EH+L T+++ Q+ AFL GF E+IP ELI+IFN++ELELLISGLPDID+DD +ANTEY YSA +P IQWFW V+ F KE+ A+LLQFVTGTSKVPL GF L+G++G +F IH+ YGS D LPS+HTCFNQLDLPEY + + L +LL AI G++ FG Sbjct: 3861 LIVEHKLITSVKDQMKAFLTGFHEIIPEELIAIFNEQELELLISGLPDIDIDDWKANTEYHNYSAGAPQIQWFWRAVRSFDKEELAKLLQFVTGTSKVPLNGFKELEGMNGVSRFNIHRDYGSKDRLPSSHTCFNQLDLPEYENYETLRSQLLKAITAGSDYFG 4024
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: PTR1_SCHPO (E3 ubiquitin-protein ligase ptr1 OS=Schizosaccharomyces pombe GN=ptr1 PE=1 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 2.662e-55 Identity = 93/163 (57.06%), Postives = 130/163 (79.75%), Query Frame = 1 Query: 4 VAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492 + +++L +++ Q+ + L+GF+++IP LI IFN++ELELLISGLP+ID+DD + NTEY GY+ +SP +QWFW V+ F +E++A+LLQF TGTSKVPL GF L+G+SG Q+F IHK+YGS++ LP +HTCFNQLDLPEY + + L LL AI+EG+EGFG Sbjct: 3063 MVDYKLRESVKDQLKSLLDGFSDIIPSHLIQIFNEQELELLISGLPEIDIDDWKNNTEYHGYNVSSPQVQWFWRAVRSFDEEERAKLLQFATGTSKVPLNGFKELEGMSGFQRFNIHKSYGSLNRLPQSHTCFNQLDLPEYDTYEQLRSMLLTAINEGSEGFG 3225
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: HUWE1_RAT (E3 ubiquitin-protein ligase HUWE1 (Fragment) OS=Rattus norvegicus GN=Huwe1 PE=1 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 1.461e-53 Identity = 102/164 (62.20%), Postives = 127/164 (77.44%), Query Frame = 1 Query: 1 VVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492 +V + R+T AIR Q+ AFLEGF E+IP LISIF ++ELELLISGLP ID+DD+++NTEY Y + S IQWFW ++ F + D+A+ LQFVTGTSKVPL+GF+AL+G++G QKFQIH+ S D LPSAHTCFNQLDLP Y S + L LLLAI E +EGFG Sbjct: 157 LVCQMRMTGAIRKQLAAFLEGFYEIIPKRLISIFTEQELELLISGLPTIDIDDLKSNTEYHKYQSNSIQIQWFWRALRSFDQADRAKFLQFVTGTSKVPLQGFAALEGMNGIQKFQIHRDDRSTDRLPSAHTCFNQLDLPAYESFEKLRHMLLLAIQECSEGFG 320
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: HUWE1_MOUSE (E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus GN=Huwe1 PE=1 SV=4) HSP 1 Score: 208.379 bits (529), Expect = 1.461e-53 Identity = 102/164 (62.20%), Postives = 127/164 (77.44%), Query Frame = 1 Query: 1 VVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492 +V + R+T AIR Q+ AFLEGF E+IP LISIF ++ELELLISGLP ID+DD+++NTEY Y + S IQWFW ++ F + D+A+ LQFVTGTSKVPL+GF+AL+G++G QKFQIH+ S D LPSAHTCFNQLDLP Y S + L LLLAI E +EGFG Sbjct: 4212 LVCQMRMTGAIRKQLAAFLEGFYEIIPKRLISIFTEQELELLISGLPTIDIDDLKSNTEYHKYQSNSIQIQWFWRALRSFDQADRAKFLQFVTGTSKVPLQGFAALEGMNGIQKFQIHRDDRSTDRLPSAHTCFNQLDLPAYESFEKLRHMLLLAIQECSEGFG 4375
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: HUWE1_HUMAN (E3 ubiquitin-protein ligase HUWE1 OS=Homo sapiens GN=HUWE1 PE=1 SV=3) HSP 1 Score: 208.379 bits (529), Expect = 1.461e-53 Identity = 102/164 (62.20%), Postives = 127/164 (77.44%), Query Frame = 1 Query: 1 VVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492 +V + R+T AIR Q+ AFLEGF E+IP LISIF ++ELELLISGLP ID+DD+++NTEY Y + S IQWFW ++ F + D+A+ LQFVTGTSKVPL+GF+AL+G++G QKFQIH+ S D LPSAHTCFNQLDLP Y S + L LLLAI E +EGFG Sbjct: 4209 LVCQMRMTGAIRKQLAAFLEGFYEIIPKRLISIFTEQELELLISGLPTIDIDDLKSNTEYHKYQSNSIQIQWFWRALRSFDQADRAKFLQFVTGTSKVPLQGFAALEGMNGIQKFQIHRDDRSTDRLPSAHTCFNQLDLPAYESFEKLRHMLLLAIQECSEGFG 4372
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: TOM1_ASHGO (Probable E3 ubiquitin-protein ligase TOM1 OS=Ashbya gossypii GN=TOM1 PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 6.137e-52 Identity = 95/163 (58.28%), Postives = 124/163 (76.07%), Query Frame = 1 Query: 4 VAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492 + E++L T+++ Q+ FL+GF +IP +LISIF+++ELELL+SGLPDID+DD + NT Y Y+ I +FW V+ F KE++A+LLQFVTGTSKVPL GF L G++G KF IH+ YGSID LPS+HTCFNQLDLP Y S + L LLLAI+EG+EGFG Sbjct: 3094 IVEYKLQTSVKDQMENFLQGFYAIIPKDLISIFDEQELELLVSGLPDIDVDDWKNNTIYVNYTPTCKQINYFWRAVRSFDKEERAKLLQFVTGTSKVPLNGFKELSGVNGISKFSIHRDYGSIDRLPSSHTCFNQLDLPAYDSYETLRGSLLLAINEGHEGFG 3256
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: TOM1_YEAST (E3 ubiquitin-protein ligase TOM1 OS=Saccharomyces cerevisiae GN=TOM1 PE=1 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 3.152e-48 Identity = 91/163 (55.83%), Postives = 122/163 (74.85%), Query Frame = 1 Query: 4 VAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492 V E++L T+++ Q++ FL GF LI +LI+IF+++ELELLISGLPDID+DD + NT Y Y+A + +FW V+ F E++A+LLQFVTGTSKVPL GF L G++G KF IH+ +GS + LPS+HTCFNQL+LP Y S + L LLLAI+EG+EGFG Sbjct: 3104 VVEYKLQTSVKEQMDNFLVGFYALISKDLITIFDEQELELLISGLPDIDVDDWKNNTTYVNYTATCKEVSYFWRAVRSFDAEERAKLLQFVTGTSKVPLNGFKELSGVNGVCKFSIHRDFGSSERLPSSHTCFNQLNLPPYESYETLRGSLLLAINEGHEGFG 3266
BLAST of CX287254 vs. ExPASy Swiss-Prot
Match: PUB3_SCHPO (E3 ubiquitin-protein ligase pub3 OS=Schizosaccharomyces pombe GN=pub3 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 2.950e-46 Identity = 85/164 (51.83%), Postives = 120/164 (73.17%), Query Frame = 1 Query: 1 VVAEHRLTTAIRPQINAFLEGFTELIPGELISIFNDKELELLISGLPDIDLDDMRANTEYSGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEGNEGFG 492 +V E R++ + Q NAF GF EL+ +L+++F+++ELELLI G+ D+D++D +++TEY Y A PVI+WFWE++ G+ ED+++LLQF TGTS++P+ GF LQG G +KF I KA G+ D LP AHTCFN+LDLP+YPSK L E+L LA+ E GFG Sbjct: 623 LVTEWRVSKRVEQQFNAFYSGFVELVSPDLVNVFDERELELLIGGISDVDVEDWKSHTEYRTYIATDPVIKWFWEIIAGWKNEDRSKLLQFATGTSRIPVNGFRDLQGSDGPRKFTIEKA-GTPDQLPVAHTCFNRLDLPDYPSKDTLHEKLSLAV-ENTVGFG 784 The following BLAST results are available for this feature:
BLAST of CX287254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287254 ID=CX287254; Name=CX287254; organism=Citrus clementina; type=EST; length=493bpback to top |