CX287273
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287273 vs. ExPASy Swiss-Prot
Match: KEULE_ARATH (SNARE-interacting protein KEULE OS=Arabidopsis thaliana GN=KEU PE=1 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 1.422e-50 Identity = 98/130 (75.38%), Postives = 113/130 (86.92%), Query Frame = -3 Query: 230 YPCMNEPSPTVHAK---NQSAAISQPPVAHSMRSRRTPTWARPRNSDDGYSSDSVLRHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKMLTV-DELSLDDIQI 607 +PCMN+PSP+ H + +A+ SQ A SMRSRRTPTWA+PR SDDGYSSDSVLRHASSDF+KMGQRIFVFIVGGATRSEL+VCHKL+ KL RE+ILGSTSLDDPPQFITK+K+LT D+LSLDD+QI Sbjct: 537 FPCMNDPSPSFHGSTSLSSAASSSQGQAAQSMRSRRTPTWAKPRGSDDGYSSDSVLRHASSDFRKMGQRIFVFIVGGATRSELKVCHKLSTKLKREVILGSTSLDDPPQFITKLKLLTANDDLSLDDLQI 666
BLAST of CX287273 vs. ExPASy Swiss-Prot
Match: SEC1A_ORYSJ (Probable protein transport Sec1a OS=Oryza sativa subsp. japonica GN=Os04g0252400 PE=3 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 2.973e-40 Identity = 85/131 (64.89%), Postives = 105/131 (80.15%), Query Frame = -3 Query: 230 YPCMNEPSPTVH----AKNQSAAISQPPVAHSMRSRRTP-TWARPRNSDDGYSSDSVLRHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKMLTVDELSLDDIQI 607 Y +N+PSP+ A Q++ QP A SMRSRRT TWARPR+SDDGYSSDSVL+H SS+ +K+GQR+FVF++GGATRSEL HKL+ KL REIILGS+SLDDPPQFITK+KML+ D+L+LDD+QI Sbjct: 537 YHYLNDPSPSFRGIPSASTQTSPAHQP--AQSMRSRRTGGTWARPRDSDDGYSSDSVLKHTSSNSRKLGQRLFVFVIGGATRSELCAAHKLSSKLKREIILGSSSLDDPPQFITKLKMLSTDDLTLDDLQI 665
BLAST of CX287273 vs. ExPASy Swiss-Prot
Match: SEC1B_ORYSJ (Probable protein transport Sec1b OS=Oryza sativa subsp. japonica GN=Os06g0135900 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.782e-38 Identity = 80/118 (67.80%), Postives = 94/118 (79.66%), Query Frame = -3 Query: 263 YPCMNEPSPTVHAKNQSAAISQPPVAHSM--RSRRTPTWARPRNSDDGYSSDS-VLRHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKMLT 607 YP M+EPS T QSAA ++P A M RSRRTPTWA+ RNSDD SSDS VLRH S+DFK++G RIFVF++GGATRSELR HKLT KL REI+LGS+S+DDPPQFI+K+KMLT Sbjct: 535 YPSMSEPSSTEQGSTQSAAATKPAQAQPMSRRSRRTPTWAKSRNSDDSQSSDSSVLRHGSNDFKRLGNRIFVFMIGGATRSELRTVHKLTMKLKREIVLGSSSIDDPPQFISKLKMLT 652
BLAST of CX287273 vs. ExPASy Swiss-Prot
Match: SEC1A_ARATH (Protein transport Sec1a OS=Arabidopsis thaliana GN=SEC1A PE=2 SV=3) HSP 1 Score: 157.532 bits (397), Expect = 4.746e-38 Identity = 78/129 (60.47%), Postives = 99/129 (76.74%), Query Frame = -3 Query: 251 YPCMNEPSPTVHAKNQSAAI--SQPPVA--------HSMRSRRTPTWARPRNSDDGYSSDSVLRHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKMLTVDEL 607 Y CMN+ S ++ ++ ++ S P A HSMRSRRT TWARP +SDDGYSSDSVL+ AS++FKK+GQRIFVFI+GGATRSELRVCHKLT L RE++LGSTS DDPPQ+ITK+K+L+ ++ Sbjct: 532 YLCMNQSSHKEESEARTGSVRKSSAPTAVPERKATPHSMRSRRTATWARPHSSDDGYSSDSVLKSASTEFKKLGQRIFVFIIGGATRSELRVCHKLTSSLRREVVLGSTSFDDPPQYITKLKLLSEKDI 660
BLAST of CX287273 vs. ExPASy Swiss-Prot
Match: SEC1B_ARATH (Protein transport Sec1b OS=Arabidopsis thaliana GN=SEC1B PE=2 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.057e-37 Identity = 85/127 (66.93%), Postives = 97/127 (76.38%), Query Frame = -3 Query: 230 YPCMNEPSPTVHAKNQSAAISQPPVAHSMRSRRTPTWARPRNSDDGYSSDSVLRHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTRKLNREIILGSTSLDDPPQFITKMKMLT-VDELSLDDIQI 607 YPCMNEP PT ++ + S + S P + HS RRTPTWAR SDDGY SDSVL ASS FK+ GQRIFVFIVGGATRSELRVCHKLT KL+RE+ILGS+S DP F+TKMK L +E+SLDDI I Sbjct: 540 YPCMNEPKPTFYSGSLSPSAS-PVLPHS---RRTPTWARRHLSDDGYFSDSVLGRASSGFKRKGQRIFVFIVGGATRSELRVCHKLTEKLDREVILGSSSFLDPLTFLTKMKQLNEEEEISLDDIVI 662 The following BLAST results are available for this feature:
BLAST of CX287273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287273 ID=CX287273; Name=CX287273; organism=Citrus clementina; type=EST; length=609bpback to top |