CX287313

Overview
NameCX287313
Unique NameCX287313
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length367
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig47 contig Ccv1_Contig47:1..367. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287313 vs. ExPASy Swiss-Prot
Match: NAT3_ARATH (Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 6.014e-53
Identity = 94/122 (77.05%), Postives = 110/122 (90.16%), Query Frame = 1
Query:    1 VERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFG 366
            +ER+ALL C+ ++WAFAAILT +GAYNNV   TK SCRTDR++L+SSAPWI++PYPFQWGTPIF+ASHVFGM GAA+V SAESTG F AASR AGATAPPAHV+SRSIGLQGIG+L+EGIFG
Sbjct:  238 LERYALLVCLAIIWAFAAILTVSGAYNNVSTATKQSCRTDRAFLMSSAPWIRIPYPFQWGTPIFKASHVFGMFGAAIVASAESTGVFFAASRLAGATAPPAHVVSRSIGLQGIGVLLEGIFG 359          
BLAST of CX287313 vs. ExPASy Swiss-Prot
Match: NAT2_ARATH (Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 3.423e-40
Identity = 76/122 (62.30%), Postives = 93/122 (76.23%), Query Frame = 1
Query:    1 VERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFG 366
            VERFAL+  + +VWA+A +LTA+GAY + P QT+L+CRTD S L+SSAPWIK+PYP QWG P F A H F M+ A LV+  ESTG F AA+R A AT PP HVLSR IG QGIG+L+ G+FG
Sbjct:  214 VERFALIIALIIVWAYAHVLTASGAYKHRPHQTQLNCRTDMSNLISSAPWIKIPYPLQWGAPSFDAGHAFAMMAAVLVSLIESTGAFKAAARLASATPPPPHVLSRGIGWQGIGILLNGLFG 335          
BLAST of CX287313 vs. ExPASy Swiss-Prot
Match: NAT1_ARATH (Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 7.137e-38
Identity = 71/121 (58.68%), Postives = 89/121 (73.55%), Query Frame = 1
Query:    4 ERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFG 366
            ERF +L C+ +VW +A ILTA+GAY   P  T+ SCRTD++ L+S+APW K PYP QWG P F   H F M+ A LV+  ESTG +IAASR A AT PPA+VLSR IG QGIG+L++G+FG
Sbjct:  211 ERFPILICVTIVWIYAVILTASGAYRGKPSLTQHSCRTDKANLISTAPWFKFPYPLQWGPPTFSVGHSFAMMSAVLVSMVESTGAYIAASRLAIATPPPAYVLSRGIGWQGIGVLLDGLFG 331          
BLAST of CX287313 vs. ExPASy Swiss-Prot
Match: NAT4_ARATH (Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 9.321e-38
Identity = 72/121 (59.50%), Postives = 91/121 (75.21%), Query Frame = 1
Query:    4 ERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFG 366
            E+FA+LF I +VWA+A ILTAAGAY+  P+ T+LSCRTDRS L+S++PW+++PYP QWG P F  S  F M+ A  V   E+TG+FIAASRF  AT  P  VLSR IG QGIG+L+ G+FG
Sbjct:  215 EQFAVLFTIAIVWAYAEILTAAGAYDKRPDNTQLSCRTDRSGLISASPWVRIPYPLQWGRPSFHGSDAFAMMAATYVAIVETTGSFIAASRFGSATHIPPSVLSRGIGWQGIGVLLNGLFG 335          
BLAST of CX287313 vs. ExPASy Swiss-Prot
Match: NAT7_ARATH (Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 2.538e-35
Identity = 66/120 (55.00%), Postives = 85/120 (70.83%), Query Frame = 1
Query:    7 RFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFG 366
            RFA++F + +VW +A +LT  GAY N    T+ SCRTDRS L+S +PWI+VPYPFQWG P F A   F M+  + V+  ESTGT+I  SRFA AT PP  VLSR +G QG+G+L+ G+FG
Sbjct:  228 RFAVIFSVVIVWIYAHLLTVGGAYKNTGVNTQTSCRTDRSGLISGSPWIRVPYPFQWGPPTFHAGEAFAMMAVSFVSLIESTGTYIVVSRFASATPPPPSVLSRGVGWQGVGVLLCGLFG 347          
BLAST of CX287313 vs. ExPASy Swiss-Prot
Match: NAT5_ARATH (Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.538e-35
Identity = 65/120 (54.17%), Postives = 86/120 (71.67%), Query Frame = 1
Query:    7 RFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFG 366
            RFA++F + +VW +A  LT  GAYN V   T+ SCRTDR+ L+S+APWI+VP+PFQWG P+F A   F M+ A+ V   ESTG FIA SR+A AT PP  V+SR +G QG+ +L+ G+FG
Sbjct:  218 RFAVIFSVAIVWLYAFFLTLGGAYNGVGTDTQRSCRTDRAGLISAAPWIRVPWPFQWGAPLFDAGEAFAMMMASFVALVESTGAFIAVSRYASATMPPPSVISRGVGWQGVAILISGLFG 337          
BLAST of CX287313 vs. ExPASy Swiss-Prot
Match: NAT6_ARATH (Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 4.053e-33
Identity = 61/121 (50.41%), Postives = 84/121 (69.42%), Query Frame = 1
Query:    4 ERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFG 366
            +RFA++F + +VW +A +LT  GAYN     T+ SCRTDR+ ++ +APWI+VP+PFQWG P F A   F M+ A+ V   ESTG F+A SR+A AT  P  +LSR IG QG+ +L+ G+FG
Sbjct:  221 DRFAVIFAVVIVWIYAHLLTVGGAYNGAAPTTQTSCRTDRAGIIGAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFVAVSRYASATMLPPSILSRGIGWQGVAILISGLFG 341          
BLAST of CX287313 vs. ExPASy Swiss-Prot
Match: NAT8_ARATH (Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.011e-32
Identity = 64/121 (52.89%), Postives = 88/121 (72.73%), Query Frame = 1
Query:    7 RFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSSAPWIKVPYPFQW-GTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFG 366
            RFA++F + +VW +A ILT  GAY+N    T++SCRTDR+ ++S++PWI+VP+P QW G P F A  +F M+ A+ V+  ESTGT+IA SR+A AT  P  VLSR IG QG G+L+ G+FG
Sbjct:  228 RFAVIFSVVIVWLYAYILTIGGAYSNTEINTQISCRTDRAGIISASPWIRVPHPIQWGGAPTFNAGDIFAMMAASFVSLVESTGTYIAVSRYASATPIPPSVLSRGIGWQGFGILLCGLFG 348          
BLAST of CX287313 vs. ExPASy Swiss-Prot
Match: LPE1_MAIZE (Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 6.056e-29
Identity = 58/120 (48.33%), Postives = 80/120 (66.67%), Query Frame = 1
Query:    7 RFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFG 366
            R A+L  + ++W +A ILTAAGAYN     T+ SCR DRS ++  +PW++ PYPFQWG PIF     F M+ A+  +  ESTGT IA SR++GAT  P  V SR IG +GI ++++G+ G
Sbjct:  217 RCAVLVTVVIIWIYAEILTAAGAYNERGPVTQFSCRADRSGIIQGSPWVRFPYPFQWGYPIFCFQDCFAMLAASFASLIESTGTLIAVSRYSGATFCPPSVFSRGIGWEGISIILDGMCG 336          
BLAST of CX287313 vs. ExPASy Swiss-Prot
Match: NAT10_ARATH (Putative nucleobase-ascorbate transporter 10 OS=Arabidopsis thaliana GN=NAT10 PE=3 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 3.925e-28
Identity = 54/121 (44.63%), Postives = 82/121 (67.77%), Query Frame = 1
Query:    4 ERFALLFCIGVVWAFAAILTAAGAYNNVPEQTKLSCRTDRSYLLSSAPWIKVPYPFQWGTPIFRASHVFGMIGAALVTSAESTGTFIAASRFAGATAPPAHVLSRSIGLQGIGMLVEGIFG 366
            +R+ ++ CI +VW FA +LT++G Y++    T+ SCRTDR+ L+++ PWI +PYPFQWG+P F  +  F M+ A+ VT  ESTG F A++R+  AT  P  V+SR     G+G+L+ G+ G
Sbjct:  232 DRYGMILCIPLVWLFAQLLTSSGVYDHKSHTTQTSCRTDRTGLITNTPWIYIPYPFQWGSPTFDITDSFAMMAASFVTLFESTGLFYASARYGSATPIPPSVVSRGTCWLGVGVLLNGMLG 352          
The following BLAST results are available for this feature:
BLAST of CX287313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
NAT3_ARATH6.014e-5377.05Nucleobase-ascorbate transporter 3 OS=Arabidopsis ... [more]
NAT2_ARATH3.423e-4062.30Nucleobase-ascorbate transporter 2 OS=Arabidopsis ... [more]
NAT1_ARATH7.137e-3858.68Nucleobase-ascorbate transporter 1 OS=Arabidopsis ... [more]
NAT4_ARATH9.321e-3859.50Nucleobase-ascorbate transporter 4 OS=Arabidopsis ... [more]
NAT7_ARATH2.538e-3555.00Nucleobase-ascorbate transporter 7 OS=Arabidopsis ... [more]
NAT5_ARATH2.538e-3554.17Nucleobase-ascorbate transporter 5 OS=Arabidopsis ... [more]
NAT6_ARATH4.053e-3350.41Nucleobase-ascorbate transporter 6 OS=Arabidopsis ... [more]
NAT8_ARATH2.011e-3252.89Nucleobase-ascorbate transporter 8 OS=Arabidopsis ... [more]
LPE1_MAIZE6.056e-2948.33Nucleobase-ascorbate transporter LPE1 OS=Zea mays ... [more]
NAT10_ARATH3.925e-2844.63Putative nucleobase-ascorbate transporter 10 OS=Ar... [more]

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Properties
Property NameValue
Genbank descriptionC01008B08SK Veg1 Citrus clementina cDNA clone C01008B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287313 ID=CX287313; Name=CX287313; organism=Citrus clementina; type=EST; length=367bp
GTTGAGAGGTTTGCTTTGCTTTTCTGCATTGGAGTTGTTTGGGCTTTTGC
TGCCATCCTCACTGCAGCTGGTGCTTACAATAATGTTCCAGAGCAAACTA
AACTGAGCTGCCGCACAGATCGTTCTTATCTTTTGTCTTCTGCTCCTTGG
ATTAAGGTTCCTTACCCATTTCAGTGGGGTACTCCCATATTCAGAGCAAG
CCATGTCTTTGGGATGATAGGAGCAGCACTTGTAACATCTGCAGAGTCAA
CTGGAACATTTATCGCAGCATCACGGTTTGCAGGTGCTACAGCTCCTCCA
GCACATGTCCTCAGCCGAAGTATTGGCCTGCAGGGTATTGGCATGCTGGT
TGAAGGAATTTTTGGTT
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