CX287328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287328 vs. ExPASy Swiss-Prot
Match: DXR_ORYSJ (1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Oryza sativa subsp. japonica GN=DXR PE=2 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 3.734e-26 Identity = 57/68 (83.82%), Postives = 60/68 (88.24%), Query Frame = -3 Query: 202 AANEKAVEMFIDEKIGYLDIFKVVELTCDKHRADLVTSPSLEDIIHYDAWAREYAAGLQFSFGKSPVP 405 AANEKAVE+FIDEKIGYLDIFKVVELTCD HR +LVT PSLE+IIHYD WAREYAA LQ S G SPVP Sbjct: 405 AANEKAVELFIDEKIGYLDIFKVVELTCDAHRNELVTRPSLEEIIHYDLWAREYAASLQPSTGLSPVP 472
BLAST of CX287328 vs. ExPASy Swiss-Prot
Match: DXR_ARATH (1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Arabidopsis thaliana GN=DXR PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 4.876e-26 Identity = 56/69 (81.16%), Postives = 60/69 (86.96%), Query Frame = -3 Query: 199 AANEKAVEMFIDEKIGYLDIFKVVELTCDKHRADLVTSPSLEDIIHYDAWAREYAAGLQFSFGKSPVPA 405 AANEKAVEMFIDEKI YLDIFKVVELTCDKHR +LVTSPSLE+I+HYD WAREYAA +Q S G PV A Sbjct: 409 AANEKAVEMFIDEKISYLDIFKVVELTCDKHRNELVTSPSLEEIVHYDLWAREYAANVQLSSGARPVHA 477
BLAST of CX287328 vs. ExPASy Swiss-Prot
Match: DXR_MENPI (1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic OS=Mentha piperita GN=DXR PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 7.785e-24 Identity = 51/66 (77.27%), Postives = 58/66 (87.88%), Query Frame = -3 Query: 208 AANEKAVEMFIDEKIGYLDIFKVVELTCDKHRADLVTSPSLEDIIHYDAWAREYAAGLQFSFGKSP 405 AANEKAVEMFIDEKIGYLDIFKVVELTCDKHR+++ SPSLE+I+HYD WAR+YAA + S G SP Sbjct: 402 AANEKAVEMFIDEKIGYLDIFKVVELTCDKHRSEMAVSPSLEEIVHYDQWARDYAATVLKSAGLSP 467
BLAST of CX287328 vs. ExPASy Swiss-Prot
Match: DXR_PROMT (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain NATL2A) GN=dxr PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.989e-11 Identity = 29/53 (54.72%), Postives = 41/53 (77.36%), Query Frame = -3 Query: 247 AANEKAVEMFIDEKIGYLDIFKVVELTCDKHRADLVTSPSLEDIIHYDAWARE 405 AANEKAVE+F++E+ ++DI KV+E C+KH+ DL +PSL +I+ D WARE Sbjct: 345 AANEKAVELFLEERFKFIDIPKVIEAICEKHKCDLNLNPSLSEILEIDNWARE 397
BLAST of CX287328 vs. ExPASy Swiss-Prot
Match: DXR_PROM1 (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain NATL1A) GN=dxr PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.989e-11 Identity = 29/53 (54.72%), Postives = 41/53 (77.36%), Query Frame = -3 Query: 247 AANEKAVEMFIDEKIGYLDIFKVVELTCDKHRADLVTSPSLEDIIHYDAWARE 405 AANEKAVE+F++E+ ++DI KV+E C+KH+ DL +PSL +I+ D WARE Sbjct: 345 AANEKAVELFLEERFKFIDIPKVIEAICEKHKCDLNLNPSLSEILEIDNWARE 397
BLAST of CX287328 vs. ExPASy Swiss-Prot
Match: DXR_SYNPX (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Synechococcus sp. (strain WH8102) GN=dxr PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.598e-11 Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = -3 Query: 187 AANEKAVEMFIDEKIGYLDIFKVVELTCDKHRADLVTSPSLEDIIHYDAWAREYAAGLQFSFGKSPVPA*LLA 405 AANE+AV F++EKI +LDI V+E C++H+ADL+ P LED++ D WAR A Q G + VP LA Sbjct: 337 AANEEAVAQFLEEKIHFLDIPVVIEAACERHKADLIAHPQLEDVLAVDQWAR-MAVREQVKRGTTRVPLAALA 408
BLAST of CX287328 vs. ExPASy Swiss-Prot
Match: DXR_PROMM (1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Prochlorococcus marinus (strain MIT 9313) GN=dxr PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.871e-11 Identity = 27/53 (50.94%), Postives = 41/53 (77.36%), Query Frame = -3 Query: 247 AANEKAVEMFIDEKIGYLDIFKVVELTCDKHRADLVTSPSLEDIIHYDAWARE 405 AANE+AV F++E+I +LDI +V+E C++H+ DL T P L+D++ DAWAR+ Sbjct: 340 AANEEAVAQFLEERIHFLDIPEVIEAACERHKPDLQTQPQLDDVLAVDAWARK 392 The following BLAST results are available for this feature:
BLAST of CX287328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287328 ID=CX287328; Name=CX287328; organism=Citrus clementina; type=EST; length=407bpback to top |