CX287335
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287335 vs. ExPASy Swiss-Prot
Match: NPL41_ARATH (NPL4-like protein 1 OS=Arabidopsis thaliana GN=At3g63000 PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 8.029e-40 Identity = 76/111 (68.47%), Postives = 100/111 (90.09%), Query Frame = 3 Query: 99 LLRIRSRDGLERVTVDGAHVTVAELKTIIQSQLRIPVESQTLSTNQNLLLAKSPSDLLQFTDMANPDRPLSSLNISHGSIVFLSYDGERNVR-GPSFNPAGSFGRKMTMDD 428 +LR+RSRDGLERV+VDG H+TV++LKT+IQ QL+IP+ +QTLSTN+NLLLAKSPSD L FTDMA+P+ +SSLN++HGS+V+L+Y+GER +R GP+ PAGSFGRKMT++D Sbjct: 3 MLRVRSRDGLERVSVDGPHITVSQLKTLIQDQLQIPIHNQTLSTNRNLLLAKSPSDFLAFTDMADPNLRISSLNLAHGSMVYLAYEGERTIRGGPAVTPAGSFGRKMTVED 113
BLAST of CX287335 vs. ExPASy Swiss-Prot
Match: NPL42_ARATH (NPL4-like protein 2 OS=Arabidopsis thaliana GN=At2g47970 PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 8.877e-39 Identity = 75/112 (66.96%), Postives = 98/112 (87.50%), Query Frame = 3 Query: 96 MLLRIRSRDGLERVTVDGAHVTVAELKTIIQSQLRIPVESQTLSTNQNLLLAKSPSDLLQFTDMANPDRPLSSLNISHGSIVFLSYDGERNVRG-PSFNPAGSFGRKMTMDD 428 M+LRIRSRDGLERVT +GAH+TV++LKT+I QL+IP+ QTLSTN++LLLAK+P+DLL FTD+ +P+ PLSSLN+ HGS+++L+YDGER++ G P PAGSFGRKMT+DD Sbjct: 2 MMLRIRSRDGLERVTAEGAHITVSQLKTLIADQLQIPLHKQTLSTNRDLLLAKTPADLLAFTDLTDPNLPLSSLNLGHGSMLYLAYDGERSIPGAPPVTPAGSFGRKMTVDD 113
BLAST of CX287335 vs. ExPASy Swiss-Prot
Match: NPL4_ORYSJ (NPL4-like protein OS=Oryza sativa subsp. japonica GN=Os01g0377700 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.969e-18 Identity = 55/116 (47.41%), Postives = 75/116 (64.66%), Query Frame = 3 Query: 96 MLLRIRSRDGLERVTV-DGAHVTVAELKTIIQSQLRIPVESQTLSTNQNLLLAKSPSDLLQFTDMANPDRPLSSLNISHGSIVFLSYDGERNVRGP----SFNPAGSFGRKMTMDD 428 M+LRIRSRDG +R+TV D A TV +L+ +I +++ +PV Q LS + LLL S S L +A+P PLSSL +S+GS V+LSY + P + + AGSFG+KMTMDD Sbjct: 1 MILRIRSRDGTDRITVPDPAAATVGDLQRLIAARVTVPVPLQRLSLDPALLLPSSASAAL----LADPAAPLSSLRLSNGSFVYLSYPPDARSSQPPPPKALSAAGSFGKKMTMDD 112 The following BLAST results are available for this feature:
BLAST of CX287335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287335 ID=CX287335; Name=CX287335; organism=Citrus clementina; type=EST; length=430bpback to top |