CX287348

Overview
NameCX287348
Unique NameCX287348
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length568
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12523 contig Ccv1_Contig12523:645..1212. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP35_ARATH (Serine carboxypeptidase-like 35 OS=Arabidopsis thaliana GN=SCPL35 PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 1.904e-67
Identity = 125/191 (65.45%), Postives = 151/191 (79.06%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIR--SNCNDHIRGFVEAYAEIDIYSIYSPVCLDSLDGKAP--PKLMVAPHLLT 562
            NK ANMLFLEAPVGVGFSYTNNS DL KLGD+VTA+DS AFLI WF +FP F+S +FYI+GESYAGHYVPQLAE+I++RN +  KDS INLKGFMIGNAVIN+ TD  GLVDYAWSHAIISD+++  I   C F +        C ++ +GF++AY +IDIYSIY+PVCL SL   +P  PK++V+P LLT
Sbjct:  126 NKEANMLFLEAPVGVGFSYTNNSMDLQKLGDEVTASDSLAFLINWFMKFPEFRSSEFYISGESYAGHYVPQLAEVIYDRNKKVTKDSSINLKGFMIGNAVINEATDMAGLVDYAWSHAIISDEVHTSIHGSCSFEEDTTNKTEQCYNNFKGFMDAYNDIDIYSIYTPVCLSSLLSSSPRKPKIVVSPRLLT 316          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP34_ARATH (Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 1.081e-62
Identity = 105/168 (62.50%), Postives = 134/168 (79.76%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRSNCNDHIRGFVEAYAEIDIYSIYSPVCL 505
            NKAAN+LFLE+PVGVGFSYTN S D+ +LGD VTA DSY FL+ WFKRFP +KSHDFYIAGESYAGHYVPQL+ELI++ N  A K  FINLKG MIGNA+++D TD KG+++YAW HA+ISD LY+ ++K CDF Q ++   CND +  + + Y  +D+YS+Y+P C+
Sbjct:  138 NKAANLLFLESPVGVGFSYTNTSRDIKQLGDTVTARDSYNFLVNWFKRFPQYKSHDFYIAGESYAGHYVPQLSELIYKENKIASKKDFINLKGLMIGNALLDDETDQKGMIEYAWDHAVISDALYEKVNKNCDFKQKLVTKECNDALDEYFDVYKILDMYSLYAPKCV 305          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP33_ARATH (Serine carboxypeptidase-like 33 OS=Arabidopsis thaliana GN=SCPL33 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 3.486e-53
Identity = 96/167 (57.49%), Postives = 119/167 (71.26%), Query Frame = 2
Query:   11 ANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRSNCNDHIRGFVEAYAEIDIYSIYSPVCLDS 511
            ANMLFLE+PVGVGFSYTN+S DL  L D   A D+Y F++ WF R+P +KS DF+IAGESYAGHY PQLAELI++RN    KDSFINLKGF++GN + +D  D KG+++YAWSHA+ISD LY      CDF  S     CN  +      Y EIDIY+IY+P C+ +
Sbjct:  123 ANMLFLESPVGVGFSYTNSSSDLENLNDAFVAEDAYNFMVAWFARYPQYKSRDFFIAGESYAGHYSPQLAELIYDRNKVQPKDSFINLKGFIVGNPLTDDEYDNKGILEYAWSHAVISDHLYDSAKHNCDFKSSNWSEPCNVAMNTVFTKYKEIDIYNIYAPKCISN 289          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP31_ARATH (Serine carboxypeptidase-like 31 OS=Arabidopsis thaliana GN=SCPL31 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.189e-47
Identity = 94/185 (50.81%), Postives = 124/185 (67.03%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHE---RNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRSN--CNDHIRGFVEAYAEIDIYSIYSPVCLDSLDGKAPPKLM 541
            NK ANMLFLE+PVGVGFSY+N S D  KLGD  TA D+Y FL  WF++FP  K + FYIAGESYAG YVP+LAE++++    N + G    INLKG ++GN   +D  D +G VDYAWSHA+ISD+ ++ I++ C+F      SN  CN+ +   ++ Y EIDIYSIY+ +         PP+LM
Sbjct:  136 NKEANMLFLESPVGVGFSYSNTSSDYQKLGDDFTARDAYTFLCNWFEKFPEHKENTFYIAGESYAGKYVPELAEVVYDNNNNNKKNGSSFHINLKGILLGNPETSDAEDWRGWVDYAWSHAVISDETHRIITRTCNFSSDNTWSNDECNEAVAEVLKQYHEIDIYSIYTSM---------PPRLM 311          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP30_ARATH (Putative serine carboxypeptidase-like 30 OS=Arabidopsis thaliana GN=SCPL30 PE=2 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 9.195e-46
Identity = 88/170 (51.76%), Postives = 119/170 (70.00%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSF-INLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRSN--CNDHIRGFVEAYAEIDIYSIYSPVC 502
            NK  NMLFLE+PVGVGFSY+N S D   L D     D+Y FL  WF++FP  K ++FYIAGESYAG YVP+LAEL+++ N +    S  INLKGF++GN  I++P D +G VDYAWSHA+ISD+ +++I++ C+F    + +N  CN+ I    + Y EIDIYS+Y+  C
Sbjct:  130 NKEVNMLFLESPVGVGFSYSNTSSDYLNLDDHFAKKDAYTFLCNWFEKFPEHKGNEFYIAGESYAGIYVPELAELVYDNNEKNNDLSLHINLKGFLLGNPDISNPDDWRGWVDYAWSHAVISDETHRNINRLCNFSSDDVWNNDKCNEAIAEVDKQYNEIDIYSLYTSAC 299          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP24_ARATH (Serine carboxypeptidase 24 OS=Arabidopsis thaliana GN=SCPL24 PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.201e-45
Identity = 90/169 (53.25%), Postives = 116/169 (68.64%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRSNCNDHIR-GFVEAYAEIDIYSIYSPVCL 505
            NK AN+LFLE+P GVG+SYTN S DL   GD+ TA D+  FLI W  RFP +K  DFYIAGESYAGHYVPQLA+ I++ N +A     INLKGF++GNAV ++  D+ G V Y W+HAIISDK YK I K C+F    +  +C++ +       + +ID YSIY+P C+
Sbjct:  119 NKDANLLFLESPAGVGYSYTNTSSDLKDSGDERTAQDNLIFLIKWLSRFPQYKYRDFYIAGESYAGHYVPQLAKKINDYN-KAFSKPIINLKGFLVGNAVTDNQYDSIGTVTYWWTHAIISDKSYKSILKYCNFTVERVSDDCDNAVNYAMNHEFGDIDQYSIYTPTCV 286          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP22_ARATH (Serine carboxypeptidase-like 22 OS=Arabidopsis thaliana GN=SCPL22 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 4.563e-45
Identity = 89/172 (51.74%), Postives = 109/172 (63.37%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMIRSNCNDHIRGFVEAYAEIDIYSIYSPVCLDSLD 517
            N  AN+LFLE+PVGVGFSYTN S D  + GD+ TA ++  FLI W  RFP ++  DFYI GESYAGHYVPQLA+ IHE N  A K+  INLKGFM+GN  ++   D  G + Y WSHA+ISD  Y  I K CDF        C+  I      + +ID YSIY+P C+   D
Sbjct:  117 NTEANLLFLESPVGVGFSYTNTSSDFEESGDERTAQENLIFLISWMSRFPQYRYRDFYIVGESYAGHYVPQLAQKIHEYN-NAYKNPVINLKGFMVGNPEMDKNNDRLGTITYWWSHAMISDASYNRILKNCDFTADRFSKECDSAIYVAAADFGDIDQYSIYTPKCVPPQD 287          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP32_ARATH (Serine carboxypeptidase-like 32 OS=Arabidopsis thaliana GN=SCPL32 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 3.863e-44
Identity = 86/175 (49.14%), Postives = 118/175 (67.43%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDS-----FINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMI--RSNCNDHIRGFVEAYAEIDIYSIYSPVCL 505
            NK AN+LFLE+P GVGFSY+N S D  KLGD  TA DSY FL  WF RFP +K  DF+IAGESYAG YVP+LAE+I+++N    KD+      INLKG ++GN + +   D  G VDYAW+HA++SD+ Y+ I + C+F         +C + +   ++ Y EID +S+Y+P+C+
Sbjct:  117 NKEANILFLESPAGVGFSYSNTSSDYRKLGDDFTARDSYTFLQKWFLRFPAYKEKDFFIAGESYAGKYVPELAEVIYDKN----KDNENLSLHINLKGILLGNPLTSYAEDWTGWVDYAWNHAVVSDETYRVIKQSCNFSSDTTWDVKDCKEGVDEILKQYKEIDQFSLYTPICM 287          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP28_ARATH (Serine carboxypeptidase-like 28 OS=Arabidopsis thaliana GN=SCPL28 PE=2 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 2.504e-43
Identity = 83/169 (49.11%), Postives = 116/169 (68.64%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQSMI--RSNCNDHIRGFVEAYAEIDIYSIYSPVC 502
            NK AN+LFL++P GVGFSYTN S D   +GD+ T  D+Y FL+ W +RFP +K   FYIAGESYAGHY+P+LA+LI  RN +  K+  INLKG ++GN +++D  D KG+ DY W+H +ISD+ Y D++K C    S++  + NCN  +   +  + +ID Y+I SP C
Sbjct:  124 NKVANVLFLDSPAGVGFSYTNTSSDELTVGDKRTGEDAYRFLVRWLERFPEYKERAFYIAGESYAGHYIPELAQLIVNRN-KGAKNPTINLKGILMGNPLVDDYNDNKGMRDYWWNHGLISDESYNDLTKWC-LNDSILFPKLNCNAALNQALSEFGDIDPYNINSPAC 290          
BLAST of CX287348 vs. ExPASy Swiss-Prot
Match: SCP26_ARATH (Serine carboxypeptidase-like 26 OS=Arabidopsis thaliana GN=SCPL26 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 4.271e-43
Identity = 84/168 (50.00%), Postives = 113/168 (67.26%), Query Frame = 2
Query:    2 NKAANMLFLEAPVGVGFSYTNNSEDLHKLGDQVTANDSYAFLIGWFKRFPNFKSHDFYIAGESYAGHYVPQLAELIHERNIRAGKDSFINLKGFMIGNAVINDPTDTKGLVDYAWSHAIISDKLYKDISKECDFGQS-MIRSNCNDHIRGFVEAYAEIDIYSIYSPVC 502
            NK AN+LFLE+P GVGFSY+N + DL+  GDQ TA D+Y FL+ WF+RFP +K  +FYIAGESYAGHYVPQL+++++E+     ++  IN KGF++GNAVI+D  D  GL +Y W+H +ISD  Y ++   C+FG S    S C   +         ID YSIY+  C
Sbjct:  118 NKLANLLFLESPAGVGFSYSNTTSDLYTAGDQRTAEDAYVFLVKWFERFPQYKHREFYIAGESYAGHYVPQLSQIVYEK-----RNPAINFKGFIVGNAVIDDYHDYVGLFEYWWAHGLISDLTYHNLRITCEFGSSEHPSSKCTKAMEAADLEQGNIDPYSIYTVTC 280          
The following BLAST results are available for this feature:
BLAST of CX287348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
SCP35_ARATH1.904e-6765.45Serine carboxypeptidase-like 35 OS=Arabidopsis tha... [more]
SCP34_ARATH1.081e-6262.50Serine carboxypeptidase-like 34 OS=Arabidopsis tha... [more]
SCP33_ARATH3.486e-5357.49Serine carboxypeptidase-like 33 OS=Arabidopsis tha... [more]
SCP31_ARATH2.189e-4750.81Serine carboxypeptidase-like 31 OS=Arabidopsis tha... [more]
SCP30_ARATH9.195e-4651.76Putative serine carboxypeptidase-like 30 OS=Arabid... [more]
SCP24_ARATH1.201e-4553.25Serine carboxypeptidase 24 OS=Arabidopsis thaliana... [more]
SCP22_ARATH4.563e-4551.74Serine carboxypeptidase-like 22 OS=Arabidopsis tha... [more]
SCP32_ARATH3.863e-4449.14Serine carboxypeptidase-like 32 OS=Arabidopsis tha... [more]
SCP28_ARATH2.504e-4349.11Serine carboxypeptidase-like 28 OS=Arabidopsis tha... [more]
SCP26_ARATH4.271e-4350.00Serine carboxypeptidase-like 26 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC01008E11SK Veg1 Citrus clementina cDNA clone C01008E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287348 ID=CX287348; Name=CX287348; organism=Citrus clementina; type=EST; length=568bp
GAACAAAGCTGCCAATATGCTGTTCTTGGAGGCTCCAGTGGGTGTAGGCT
TTTCATACACCAACAATTCTGAAGATTTACATAAACTTGGCGATCAAGTT
ACAGCAAATGATTCTTATGCATTCTTGATTGGATGGTTCAAAAGATTTCC
AAACTTCAAATCCCATGACTTTTACATTGCTGGAGAAAGCTATGCCGGTC
ATTATGTTCCTCAACTTGCTGAGCTCATTCACGAAAGAAACATAAGAGCT
GGCAAAGACTCATTTATAAATCTTAAGGGTTTCATGATAGGGAATGCCGT
GATCAATGATCCAACGGACACCAAAGGGCTAGTGGATTATGCATGGAGTC
ATGCAATTATATCAGACAAACTCTACAAAGATATAAGCAAGGAATGTGAT
TTTGGGCAAAGCATGATAAGAAGCAATTGCAATGATCATATCAGAGGCTT
TGTTGAAGCTTATGCTGAAATTGACATCTACAGCATTTACTCTCCAGTTT
GTTTGGATTCTCTTGATGGTAAAGCTCCTCCAAAACTGATGGTCGCCCCT
CATCTCCTGACTCAACAT
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