CX287398
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287398 vs. ExPASy Swiss-Prot
Match: VPS2A_ARATH (Vacuolar protein sorting-associated protein 2 homolog 1 OS=Arabidopsis thaliana GN=VPS2.1 PE=2 SV=2) HSP 1 Score: 252.677 bits (644), Expect = 6.176e-67 Identity = 130/136 (95.59%), Postives = 135/136 (99.26%), Query Frame = 3 Query: 69 VMSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEK 476 +M+ +FGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLI+EIKK+AKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEK Sbjct: 1 MMNSIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLINEIKKTAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEK 136
BLAST of CX287398 vs. ExPASy Swiss-Prot
Match: CM2A2_DICDI (Charged multivesicular body protein 2a homolog 2 OS=Dictyostelium discoideum GN=chmp2a2 PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 2.207e-48 Identity = 95/133 (71.43%), Postives = 115/133 (86.47%), Query Frame = 3 Query: 78 FLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEK 476 FLFGK+KTP E+LREN+R L+KS+REI+RER LQ QEKK+I +IKK AKQGQM + K+MAKDL+RTR+ I+KFY++K+QLQ VSLRIQTL+STQAM EAMKGVTKAM MNRQMNLP KIM EFE+Q++K Sbjct: 2 FLFGKQKTPKEVLRENQRNLNKSMREIDRERVALQNQEKKIILDIKKMAKQGQMNSAKIMAKDLVRTRYHIQKFYEMKTQLQAVSLRIQTLQSTQAMAEAMKGVTKAMITMNRQMNLPQFTKIMMEFEQQSDK 134
BLAST of CX287398 vs. ExPASy Swiss-Prot
Match: CHM2A_MOUSE (Charged multivesicular body protein 2a OS=Mus musculus GN=Chmp2a PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 3.895e-45 Identity = 86/134 (64.18%), Postives = 112/134 (83.58%), Query Frame = 3 Query: 72 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNE 473 M LFG+RKTP ELLR+N+R L++++RE++RERQ L+TQEKK+I++IKK AKQGQM AV++MAKDL+RTR + KF +++ +Q VSL+IQTLKS +M +AMKGVTKAMG MNRQ+ LP +QKIM EFERQ E Sbjct: 1 MDLLFGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIMMEFERQAE 134
BLAST of CX287398 vs. ExPASy Swiss-Prot
Match: CHM2A_HUMAN (Charged multivesicular body protein 2a OS=Homo sapiens GN=CHMP2A PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 3.895e-45 Identity = 86/134 (64.18%), Postives = 112/134 (83.58%), Query Frame = 3 Query: 72 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNE 473 M LFG+RKTP ELLR+N+R L++++RE++RERQ L+TQEKK+I++IKK AKQGQM AV++MAKDL+RTR + KF +++ +Q VSL+IQTLKS +M +AMKGVTKAMG MNRQ+ LP +QKIM EFERQ E Sbjct: 1 MDLLFGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIMMEFERQAE 134
BLAST of CX287398 vs. ExPASy Swiss-Prot
Match: CHM2A_XENTR (Charged multivesicular body protein 2a OS=Xenopus tropicalis GN=chmp2a PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 5.087e-45 Identity = 85/134 (63.43%), Postives = 113/134 (84.33%), Query Frame = 3 Query: 72 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNE 473 M FLFG+RKTP E+LR+N+R L+K++RE++RERQ L+ QEKK+I++IKK AKQGQM AVK+MAKDL+RTR ++KF +++ +Q VSL+IQTLKS +M +AMKGVTKAM MNRQ+ LP +QKIM EFE+Q+E Sbjct: 1 MEFLFGRRKTPEEMLRQNQRALNKAMREMDRERQKLEQQEKKIIADIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQSE 134
BLAST of CX287398 vs. ExPASy Swiss-Prot
Match: CHM2A_XENLA (Charged multivesicular body protein 2a OS=Xenopus laevis GN=chmp2a PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 5.087e-45 Identity = 85/134 (63.43%), Postives = 113/134 (84.33%), Query Frame = 3 Query: 72 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNE 473 M FLFG+RKTP ELLR+N+R L++++RE++RERQ L+ QEKK+I++IKK AKQGQM AVK+MAKDL+RTR ++KF +++ +Q VSL+IQTLKS +M +AMKGVTKAM MNRQ+ LP +QKIM EFE+Q+E Sbjct: 1 MEFLFGRRKTPEELLRQNQRALNRAMRELDRERQKLEQQEKKIIADIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQSE 134
BLAST of CX287398 vs. ExPASy Swiss-Prot
Match: CHM2A_DANRE (Charged multivesicular body protein 2a OS=Danio rerio GN=chmp2a PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 7.346e-44 Identity = 83/134 (61.94%), Postives = 112/134 (83.58%), Query Frame = 3 Query: 72 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNE 473 M LFG+RKTP E+LR+N+R L++++R+++RERQ L+ QEKK+I++IKK AKQGQM AVK+MAKDL+RTR ++KF +++ +Q VSL+IQTLKS +M +AMKGVTKAM MNRQ+ LP +QKIM EFERQ+E Sbjct: 1 MESLFGRRKTPEEMLRQNQRALNRAMRDLDRERQRLEQQEKKIIADIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFERQSE 134
BLAST of CX287398 vs. ExPASy Swiss-Prot
Match: CHM2A_CHICK (Charged multivesicular body protein 2a OS=Gallus gallus GN=CHMP2A PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.809e-42 Identity = 83/132 (62.88%), Postives = 107/132 (81.06%), Query Frame = 3 Query: 72 MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQ 467 M LFG+RKTP ELLR+N+R L +++RE++RERQ L+ QEKK+I +IKK AKQGQM AVK+MAKDL+RTR ++KF +++ +Q VSL+IQTLKS +M AMKGVTKAM MNRQ+ LP +QKIM EFE+Q Sbjct: 1 MDLLFGRRKTPEELLRQNQRALTRAMRELDRERQKLEAQEKKIIIDIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFITMRANVQAVSLKIQTLKSNNSMALAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQ 132
BLAST of CX287398 vs. ExPASy Swiss-Prot
Match: DID4_YEAST (DOA4-independent degradation protein 4 OS=Saccharomyces cerevisiae GN=DID4 PE=1 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 1.389e-34 Identity = 70/135 (51.85%), Postives = 101/135 (74.81%), Query Frame = 3 Query: 69 VMSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNE 473 + ++FGK TP E L++N+R L+++ RE+ERE++ L+ Q+KKL+SEIKKSAK GQ+ A KV AKDL+RTR+ I+KF +K+QLQ +SLRIQ ++S+ M +M T + MNR MNLP LQ+I EFE+Q++ Sbjct: 3 LFEWVFGKNVTPQERLKKNQRALERTQRELEREKRKLELQDKKLVSEIKKSAKNGQVAAAKVQAKDLVRTRNYIQKFDNMKAQLQAISLRIQAVRSSDQMTRSMSEATGLLAGMNRTMNLPQLQRISMEFEKQSD 137
BLAST of CX287398 vs. ExPASy Swiss-Prot
Match: YDS1_SCHPO (Uncharacterized protein C4F8.01 OS=Schizosaccharomyces pombe GN=SPAC4F8.01 PE=2 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 3.913e-29 Identity = 60/133 (45.11%), Postives = 96/133 (72.18%), Query Frame = 3 Query: 75 SFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLISEIKKSAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNE 473 S+LFG K+P E LR ++R L ++ RE++RER L +E+ LI EIK SAK G GA ++ A+DL+R R+ +K K+QLQ +SLR+QT+++++ M ++M+G T+ + MN+ MN+P++ +I Q+FER+NE Sbjct: 5 SWLFGGGKSPQEQLRAHQRSLGRAERELDRERTKLDQRERALIQEIKGSAKAGNTGAARIQARDLMRLRNSRKKMMNAKTQLQAISLRLQTMRTSEQMMQSMRGATRLLTGMNKSMNIPAMARITQQFERENE 137 The following BLAST results are available for this feature:
BLAST of CX287398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287398 ID=CX287398; Name=CX287398; organism=Citrus clementina; type=EST; length=476bpback to top |