CX287415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287415 vs. ExPASy Swiss-Prot
Match: YQL5_SCHPO (Uncharacterized RNA-binding protein C1827.05c OS=Schizosaccharomyces pombe GN=SPCC1827.05c PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 5.457e-29 Identity = 58/128 (45.31%), Postives = 86/128 (67.19%), Query Frame = 2 Query: 161 RKLTEEKPLVNKATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFNPRYKPVDRVQVERKLQNKERTLEE 544 +K++E K L K VLY+GR+PHGFYEK+M+ +FSQFG + RLR++RN+ TG SKH+ FIEF +VA VVA+ MH YLL+ +LQ +IP + VH +++G + +K + + R K + E+ Sbjct: 92 KKVSENKNLQKKKGVLYVGRLPHGFYEKQMRMYFSQFGPVLRLRMSRNRKTGSSKHYAFIEFESLDVANVVAETMHNYLLYGKLLQCKVIPEDQVHENMFKGADVPFKRIPHATIARLQHEKPLSKEK 219
BLAST of CX287415 vs. ExPASy Swiss-Prot
Match: MK67I_XENTR (MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus tropicalis GN=mki67ipl PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.221e-22 Identity = 49/114 (42.98%), Postives = 74/114 (64.91%), Query Frame = 2 Query: 203 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFNPRYKPVDRVQVERKLQNKERTLEE 544 V+YIG IP YE +++ +FSQFG + RLR++R+K TG SK + ++EF EVA++VAD M+ YL E +L+ +PPE VHP+L+ G +++ + V R NK R+ E Sbjct: 42 VIYIGHIPRALYEPQLREYFSQFGTVTRLRLSRSKKTGNSKGYAYVEFECDEVAKIVADTMNNYLFCERLLKCEFVPPEKVHPRLFIGCTAKFRKPTKPAVSR--YNKRRSEAE 153
BLAST of CX287415 vs. ExPASy Swiss-Prot
Match: MK67I_DANRE (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Danio rerio GN=mki67ip PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 2.221e-22 Identity = 54/129 (41.86%), Postives = 81/129 (62.79%), Query Frame = 2 Query: 203 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGF-----NPRYKPVDRV----------QVERKLQNKERTLEE 544 VLY+G +P G +E +++++F QFG + RLR++R+K TG SK +GF+EF EVA++VA+ M+ YL+ E I++ H+IPPE VH KL+ G P+Y V R +V KL +KE L + Sbjct: 46 VLYVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDEVAKIVAETMNNYLMGERIIKCHVIPPEKVHEKLFVGSIAGFKKPKYPAVTRYNKTHTEDDVKKVGTKLLSKESKLRK 174
BLAST of CX287415 vs. ExPASy Swiss-Prot
Match: MK67I_BOVIN (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Bos taurus GN=MKI67IP PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.788e-22 Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 2 Query: 203 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFN-----PRYKPVDRVQVERKLQNKERTLE 541 V+Y+G +P YE +++A+FSQFG + R R++R+K TG SK +GF+EF +VA++ A+ M+ YL E +L+ H IPPE VH +L+R ++ P Y V R R L K R E Sbjct: 46 VIYVGHLPPTLYETQIRAYFSQFGTVTRFRLSRSKKTGNSKGYGFVEFESEDVAKIAAETMNNYLFGERLLKCHFIPPEKVHEELFREWHMPFKRPSYPAVKRYNQNRSLVQKLRMEE 163
BLAST of CX287415 vs. ExPASy Swiss-Prot
Match: NOP15_YEAST (Ribosome biogenesis protein 15 OS=Saccharomyces cerevisiae GN=NOP15 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 8.439e-22 Identity = 50/129 (38.76%), Postives = 82/129 (63.57%), Query Frame = 2 Query: 161 RKLTEEKPLVNKATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFNPRYKPVDRVQVERKLQNKERTLEEH 547 +K ++K L + ++Y+ R+PHGF+EKE+ +F+QFG +K +R+ARNK TG S+H+GF+EF + E A + ++M+ YLL H+LQV ++P KL YK RV VE+ + + L+++ Sbjct: 78 KKSKDKKTLEEYSGIIYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESMNNYLLMGHLLQVRVLPKGAKIEKL-------YKYKKRVLVEKGITKPVKQLKDN 199
BLAST of CX287415 vs. ExPASy Swiss-Prot
Match: MK67I_XENLA (MKI67 FHA domain-interacting nucleolar phosphoprotein-like OS=Xenopus laevis GN=mki67ipl PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 2.455e-21 Identity = 48/114 (42.11%), Postives = 73/114 (64.04%), Query Frame = 2 Query: 203 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFNPRYKPVDRVQVERKLQNKERTLEE 544 V+YIG IP E ++Q +F+QFG + RLR++R+K TG SK + ++E+ EVA++VAD M+ YL E +L+ + PE VHP+L+ G N R++ + V R N +R EE Sbjct: 42 VIYIGHIPKSLIEPQLQEYFNQFGTVTRLRLSRSKKTGNSKGYAYVEYECDEVAKIVADTMNNYLFCERLLKCEFVTPEKVHPRLFIGCNTRFRKPTKPAVTR--YNSKRNKEE 153
BLAST of CX287415 vs. ExPASy Swiss-Prot
Match: MK67I_HUMAN (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Homo sapiens GN=MKI67IP PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.920e-19 Identity = 44/114 (38.60%), Postives = 74/114 (64.91%), Query Frame = 2 Query: 203 VLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFNPRYKPVDRVQVERKLQNKERTLEE 544 V+Y+ +P+ E ++ ++FSQFG + R R++R+K TG SK + F+EF +VA++VA+ M+ YL E +L+ H +PPE VH +L++ +N +K V+R N+ RTL + Sbjct: 46 VVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETMNNYLFGERLLECHFMPPEKVHKELFKDWNIPFKQPSYPSVKR--YNRNRTLTQ 157
BLAST of CX287415 vs. ExPASy Swiss-Prot
Match: MK67I_RAT (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Rattus norvegicus GN=Mki67ip PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 7.650e-15 Identity = 41/122 (33.61%), Postives = 67/122 (54.92%), Query Frame = 2 Query: 161 RKLTEEKPLVNKATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFNPRYKPVDRVQVERKLQNK 526 R+ ++K + V+Y+G +P E + + +QFG I+R R++R+K TG S+ F F+EF +VA++VA+ M YL E +L +P E VH L+ N + P V+R Q + Sbjct: 31 RRAKKKKEEKLNSGVVYLGHLPSTLSESHIYDYCAQFGDIRRFRLSRSKRTGNSRGFAFVEFESEDVAKIVAETMDNYLFGERLLSCKFMPREKVHKDLFNQCNVPFHPPSFPAVKRYNQKR 152
BLAST of CX287415 vs. ExPASy Swiss-Prot
Match: MK67I_MOUSE (MKI67 FHA domain-interacting nucleolar phosphoprotein OS=Mus musculus GN=Mki67ip PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.884e-13 Identity = 44/149 (29.53%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 143 LEGGPGRKLTEEKPLVNKATVLYIGRIPHGFYEKEMQAFFSQFGAIKRLRIARNKMTGQSKHFGFIEFNDPEVAEVVADAMHGYLLFEHILQVHLIPPEHVHPKLWRGFN-----PRYKPVDR----------VQVERKLQNKERTLEE 544 ++G + ++K +N+ V+Y+G +P E + + +QFG I R R++R+K TG SK + F+EF +VA++VA+ M YL E +L +P + VH L+ N P + V R +++E + + KE+ L + Sbjct: 29 IQGRTKKPQQKKKEKLNRG-VVYLGHLPSTLSESHIYNYCAQFGDISRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETMDNYLFGERLLSCKFMPRKKVHKDLFSQRNALFHRPSFPAVKRYNRKRGHLQMLKMEYRFKKKEKLLRK 176 The following BLAST results are available for this feature:
BLAST of CX287415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287415 ID=CX287415; Name=CX287415; organism=Citrus clementina; type=EST; length=548bpback to top |