CX287431
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287431 vs. ExPASy Swiss-Prot
Match: PSB2A_ARATH (Proteasome subunit beta type-2-A OS=Arabidopsis thaliana GN=PBD1 PE=1 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 5.781e-68 Identity = 124/140 (88.57%), Postives = 135/140 (96.43%), Query Frame = 1 Query: 61 MECVFGLVGDGFAILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLS 480 MECVFGLVG+GFAI+ ADTSAVHSIL+HK+NEDKIMVLDSHKL+AASGEPGDRVQFTE++QKNVSLY+FRNGIPLTTAAAANFTRGELATALRK+PY VNIL+AGYD E+G SLYYIDYIATLHKVDK AFGYGSYFSLS Sbjct: 1 MECVFGLVGNGFAIVAADTSAVHSILLHKNNEDKIMVLDSHKLVAASGEPGDRVQFTEYVQKNVSLYKFRNGIPLTTAAAANFTRGELATALRKNPYSVNILMAGYDDESGASLYYIDYIATLHKVDKGAFGYGSYFSLS 140
BLAST of CX287431 vs. ExPASy Swiss-Prot
Match: PSB2B_ARATH (Proteasome subunit beta type-2-B OS=Arabidopsis thaliana GN=PBD2 PE=1 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 2.197e-67 Identity = 123/140 (87.86%), Postives = 133/140 (95.00%), Query Frame = 1 Query: 61 MECVFGLVGDGFAILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLS 480 MECVFGLVG+GFAI+ ADTSAVHSIL+HK+ EDKIM LDSHKL+AASGEPGDRVQFTE++QKNVSLYQFRNGIPL+TAAAANFTRGELATALRK+PY VNIL+AGYDKE G SLYYIDYIATLHKVDK AFGYGSYFSLS Sbjct: 1 MECVFGLVGNGFAIVAADTSAVHSILLHKNKEDKIMTLDSHKLVAASGEPGDRVQFTEYVQKNVSLYQFRNGIPLSTAAAANFTRGELATALRKNPYSVNILMAGYDKEAGASLYYIDYIATLHKVDKGAFGYGSYFSLS 140
BLAST of CX287431 vs. ExPASy Swiss-Prot
Match: PSB2_ORYSJ (Proteasome subunit beta type-2 OS=Oryza sativa subsp. japonica GN=PBD1 PE=2 SV=2) HSP 1 Score: 231.106 bits (588), Expect = 1.992e-60 Identity = 110/141 (78.01%), Postives = 125/141 (88.65%), Query Frame = 1 Query: 61 MECVFGLVGDGFAILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSM 483 MECV G+VG FA++ ADTSAV SILVHK++EDK+MVLDSHKL+ ASGEPGDRVQFTEFIQKN+ LYQFRN IPL+TAA ANFTRGELATALRK+PY VN+LLAGYD + G SLYYIDYIAT HK++K AFGYGSYF LS+ Sbjct: 1 MECVIGVVGRDFAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFIQKNLHLYQFRNNIPLSTAATANFTRGELATALRKNPYYVNVLLAGYDSDVGASLYYIDYIATFHKIEKGAFGYGSYFCLSL 141
BLAST of CX287431 vs. ExPASy Swiss-Prot
Match: PSB2_DICDI (Proteasome subunit beta type-2 OS=Dictyostelium discoideum GN=psmB2 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.176e-36 Identity = 73/144 (50.69%), Postives = 99/144 (68.75%), Query Frame = 1 Query: 61 MECVFGLVGDGFAILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKET---GPSLYYIDYIATLHKVDKAAFGYGSYFSLSM 483 ME + G + +AD+S HSI+ K +EDKI+ +D HKL+ ++GE GDRVQFTE+I KN+ LY RN P++T AAANF R ELAT++R PY +N++LAGYDKE G SLYY+DY+ +L K++ GY SYF L + Sbjct: 1 METLLAFKVKGGVLCLADSSVNHSIVKMKDDEDKILEIDGHKLLLSAGEAGDRVQFTEYISKNIKLYSLRNSYPMSTPAAANFIRNELATSIRSHPYSINLILAGYDKEVEDGGTSLYYMDYLGSLQKLNFGCHGYASYFLLGL 144
BLAST of CX287431 vs. ExPASy Swiss-Prot
Match: PSB2_RAT (Proteasome subunit beta type-2 OS=Rattus norvegicus GN=Psmb2 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.487e-31 Identity = 68/142 (47.89%), Postives = 94/142 (66.20%), Query Frame = 1 Query: 61 MECVFGLVGDGFAILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSM 483 ME + G+ G + ++ +D A +I+ K + DK+ + L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS+ Sbjct: 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSI 142
BLAST of CX287431 vs. ExPASy Swiss-Prot
Match: PSB2_MOUSE (Proteasome subunit beta type-2 OS=Mus musculus GN=Psmb2 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.487e-31 Identity = 68/142 (47.89%), Postives = 94/142 (66.20%), Query Frame = 1 Query: 61 MECVFGLVGDGFAILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSM 483 ME + G+ G + ++ +D A +I+ K + DK+ + L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS+ Sbjct: 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSI 142
BLAST of CX287431 vs. ExPASy Swiss-Prot
Match: PSB2_HUMAN (Proteasome subunit beta type-2 OS=Homo sapiens GN=PSMB2 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.487e-31 Identity = 68/142 (47.89%), Postives = 94/142 (66.20%), Query Frame = 1 Query: 61 MECVFGLVGDGFAILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSM 483 ME + G+ G + ++ +D A +I+ K + DK+ + L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS+ Sbjct: 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSI 142
BLAST of CX287431 vs. ExPASy Swiss-Prot
Match: PSB2_BOVIN (Proteasome subunit beta type-2 OS=Bos taurus GN=PSMB2 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.537e-31 Identity = 68/142 (47.89%), Postives = 94/142 (66.20%), Query Frame = 1 Query: 61 MECVFGLVGDGFAILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSM 483 ME + G+ G + ++ +D A +I+ K + DK+ + L+ GE GD VQF E+IQKNV LY+ RNG L+ AAANFTR LA LR ++PY VN+LLAGYD+ GP+LYY+DY+A L K AA GYG++ +LS+ Sbjct: 1 MEYLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSI 142
BLAST of CX287431 vs. ExPASy Swiss-Prot
Match: PSB2_NEUCR (Probable proteasome subunit beta type-2 OS=Neurospora crassa GN=15E6.60 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 3.663e-30 Identity = 69/143 (48.25%), Postives = 92/143 (64.34%), Query Frame = 1 Query: 61 MECVFGLVGDGFAILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSM 483 M + G+ G F I+ A +A+ + K+++DK L+ H L+A SGE GD VQF E+ Q N LY RNG L+ +A ANF RGELAT+LR + PY VN+LL G D T PSLY++DY+A+L KV AA GY Y+ LS+ Sbjct: 1 MYVLLGITGKDFTIIAASKAAMRGATILKASDDKTRSLNKHTLMAFSGEAGDTVQFAEYTQANAQLYSMRNGTDLSPSALANFVRGELATSLRSRKPYNVNLLLGGVDPITHKPSLYWLDYLASLAKVPYAAHGYAQYYCLSI 143
BLAST of CX287431 vs. ExPASy Swiss-Prot
Match: PSB2_SCHPO (Probable proteasome subunit beta type-2 OS=Schizosaccharomyces pombe GN=SPAC31A2.04c PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.222e-27 Identity = 63/143 (44.06%), Postives = 91/143 (63.64%), Query Frame = 1 Query: 61 MECVFGLVGDGFAILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSM 483 ME + + G F + + +SAV I V K ++DK +L+SH L+ GE GD F E+I N+SLY R+ + L+ A A+FTR +LAT+LR + PY VNILLAGY+ G P L+++DY+AT +V A GY S++ LS+ Sbjct: 1 MESLLAVQGQDFVLTASSSSAVRGITVLKPDDDKSQILNSHNLMLYCGEAGDTTNFAEYIAANISLYTLRHNLNLSPEATASFTRKQLATSLRSRKPYQVNILLAGYETNLGKPELFWLDYLATCVRVPYACQGYSSFYCLSI 143 The following BLAST results are available for this feature:
BLAST of CX287431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287431 ID=CX287431; Name=CX287431; organism=Citrus clementina; type=EST; length=483bpback to top |