CX287441

Overview
NameCX287441
Unique NameCX287441
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length505
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10759 contig Ccv1_Contig10759:504..1008. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287441 vs. ExPASy Swiss-Prot
Match: SUT42_ARATH (Probable sulfate transporter 4.2 OS=Arabidopsis thaliana GN=SULTR4;2 PE=2 SV=2)

HSP 1 Score: 259.996 bits (663), Expect = 4.532e-69
Identity = 128/168 (76.19%), Postives = 146/168 (86.90%), Query Frame = 1
Query:    1 DSSDESYTELAILLALMVGIFESIMGLLRLGWLIRFISHAVISGFTTASAIVIALSQAKYFLGYDVARSSKIVPLIKSIILGADKFSWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYHPPSITLVGDIPQGLPNFSIPKSFECAMSLIP 504
            D S+E YTELAILLALMVGIFESIMG LRLGWLIRFISH+VISGFTTASA+VI LSQ KYFLGY V+RSSKI+P+I SII GAD+F WPPFL+G  IL ILL+MK +GK++K LRF+RAAGPLTG+ LGT I K++HPPSITLVGDIPQGLP FS PKSF+ A  L+P
Sbjct:  155 DPSEELYTELAILLALMVGIFESIMGFLRLGWLIRFISHSVISGFTTASAVVIGLSQLKYFLGYSVSRSSKIMPVIDSIIAGADQFKWPPFLLGCTILVILLVMKHVGKAKKELRFIRAAGPLTGLALGTIIAKVFHPPSITLVGDIPQGLPKFSFPKSFDHAKLLLP 322          
BLAST of CX287441 vs. ExPASy Swiss-Prot
Match: SUT41_ARATH (Sulfate transporter 4.1, chloroplastic OS=Arabidopsis thaliana GN=SULTR4;1 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 7.236e-67
Identity = 121/168 (72.02%), Postives = 149/168 (88.69%), Query Frame = 1
Query:    1 DSSDESYTELAILLALMVGIFESIMGLLRLGWLIRFISHAVISGFTTASAIVIALSQAKYFLGYDVARSSKIVPLIKSIILGADKFSWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYHPPSITLVGDIPQGLPNFSIPKSFECAMSLIP 504
            D+++E + ELAILLAL+VGI E IMGLLRLGWLIRFISH+VISGFT+ASAIVI LSQ KYFLGY +ARSSKIVP+++SII GADKF WPPF++GS+IL IL +MK +GK++K L+FLRAA PLTG+VLGTTI K++HPPSI+LVG+IPQGLP FS P+SF+ A +L+P
Sbjct:  168 DTNEELHIELAILLALLVGILECIMGLLRLGWLIRFISHSVISGFTSASAIVIGLSQIKYFLGYSIARSSKIVPIVESIIAGADKFQWPPFVMGSLILVILQVMKHVGKAKKELQFLRAAAPLTGIVLGTTIAKVFHPPSISLVGEIPQGLPTFSFPRSFDHAKTLLP 335          
BLAST of CX287441 vs. ExPASy Swiss-Prot
Match: SUT11_ARATH (Sulfate transporter 1.1 OS=Arabidopsis thaliana GN=SULTR1;1 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 5.618e-19
Identity = 56/160 (35.00%), Postives = 86/160 (53.75%), Query Frame = 1
Query:   13 ESYTELAILLALMVGIFESIMGLLRLGWLIRFISHAVISGFTTASAIVIALSQAKYFLGYDV-ARSSKIVPLIKSIILGADK-FSWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYH--PPSITLVGDIPQGLPNFSIPKSF 480
            E Y  L        GIF++ +G LRLG+LI F+SHA + GF   +AI IAL Q K FLG     + + IV ++ S+   A+  ++W   ++G+  L  LL+ K +GK  + L ++ A  PL  V++ T  V I+      + +V  I QG+   S+ K F
Sbjct:  164 EDYLRLVFTATFFAGIFQAGLGFLRLGFLIDFLSHAAVVGFMGGAAITIALQQLKGFLGIKTFTKKTDIVSVMHSVFKNAEHGWNWQTIVIGASFLTFLLVTKFIGKRNRKLFWVPAIAPLISVIISTFFVFIFRADKQGVQIVKHIDQGINPISVHKIF 323          
BLAST of CX287441 vs. ExPASy Swiss-Prot
Match: SUT34_ARATH (Probable sulfate transporter 3.4 OS=Arabidopsis thaliana GN=SULTR3;4 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.642e-18
Identity = 48/148 (32.43%), Postives = 85/148 (57.43%), Query Frame = 1
Query:   19 YTELAILLALMVGIFESIMGLLRLGWLIRFISHAVISGFTTASAIVIALSQAKYFLG-YDVARSSKIVPLIKSIILGADKFSWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYHPP--SITLVGDIPQGL 453
            Y +LA       G+F++ +GLLRLG++I F+S A + GFT  +A++++L Q K  LG        +IVP++ S+     ++SW   ++G   L+ILL  + +   +  L ++ AA PL  V++ T +V +      +I+ +G +P+GL
Sbjct:  170 YLKLAFTSTFFAGVFQASLGLLRLGFMIDFLSKATLIGFTAGAAVIVSLQQLKGLLGIVHFTGKMQIVPVMSSVFNHRSEWSWETIVMGIGFLSILLTTRHISMRKPKLFWISAASPLASVIISTLLVYLIRSKTHAISFIGHLPKGL 317          
BLAST of CX287441 vs. ExPASy Swiss-Prot
Match: SUT12_ARATH (Sulfate transporter 1.2 OS=Arabidopsis thaliana GN=SULTR1;2 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.258e-17
Identity = 53/155 (34.19%), Postives = 82/155 (52.90%), Query Frame = 1
Query:    1 DSSDESYTELAILLALMVGIFESIMGLLRLGWLIRFISHAVISGFTTASAIVIALSQAKYFLGY-DVARSSKIVPLIKSIILGADK-FSWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYH--PPSITLVGDIPQGL 453
            ++S + Y  LA       GI E+ +G  RLG+LI F+SHA + GF   +AI IAL Q K FLG     + + I+ +++S+   A   ++W   L+G+  L  LL  K +GK  K L ++ A  PL  V++ T  V I       + +V  + QG+
Sbjct:  165 NTSPDEYLRLAFTATFFAGITEAALGFFRLGFLIDFLSHAAVVGFMGGAAITIALQQLKGFLGIKKFTKKTDIISVLESVFKAAHHGWNWQTILIGASFLTFLLTSKIIGKKSKKLFWVPAIAPLISVIVSTFFVYITRADKQGVQIVKHLDQGI 319          
BLAST of CX287441 vs. ExPASy Swiss-Prot
Match: SUT33_ARATH (Probable sulfate transporter 3.3 OS=Arabidopsis thaliana GN=SULTR3;3 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 8.969e-17
Identity = 44/148 (29.73%), Postives = 83/148 (56.08%), Query Frame = 1
Query:   19 YTELAILLALMVGIFESIMGLLRLGWLIRFISHAVISGFTTASAIVIALSQAKYFLGY-DVARSSKIVPLIKSIILGADKFSWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYHPP--SITLVGDIPQGL 453
            + +LA       G+F++ +G+LRLG++I F+S A + GF   +AI+++L Q K  LG     +   +VP++ S+    +++SW   ++G   L  LL  + L   +  L ++ A  PL  V++ T +V ++      I+++G +P+GL
Sbjct:  147 FLQLAFSSTFFAGLFQASLGILRLGFIIDFLSKATLIGFMGGAAIIVSLQQLKGLLGITHFTKHMSVVPVLSSVFQHTNEWSWQTIVMGVCFLLFLLSTRHLSMKKPKLFWVSAGAPLLSVIVSTLLVFVFRAERHGISVIGKLPEGL 294          
BLAST of CX287441 vs. ExPASy Swiss-Prot
Match: SUT32_ARATH (Sulfate transporter 3.2 OS=Arabidopsis thaliana GN=SULTR3;2 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.610e-16
Identity = 47/148 (31.76%), Postives = 76/148 (51.35%), Query Frame = 1
Query:   19 YTELAILLALMVGIFESIMGLLRLGWLIRFISHAVISGFTTASAIVIALSQAKYFLG-YDVARSSKIVPLIKSIILGADKFSWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYHPP--SITLVGDIPQGL 453
            Y  LA       G+ ++ +GLLRLG+++  +SHA I GF   +A V+ L Q K  LG +    S+ IV +++SI   +  + W   ++G   L  LL  K + K R  L ++ A  PL  V+ GT  +   H     I  +G++ +G+
Sbjct:  154 YLHLAFTATFFAGLMQTCLGLLRLGFVVEILSHAAIVGFMGGAATVVCLQQLKGLLGLHHFTHSTDIVTVLRSIFSQSHMWRWESGVLGCCFLIFLLTTKYISKKRPKLFWISAMSPLVSVIFGTIFLYFLHDQFHGIQFIGELKKGI 301          
BLAST of CX287441 vs. ExPASy Swiss-Prot
Match: SUT13_ARATH (Sulfate transporter 1.3 OS=Arabidopsis thaliana GN=SULTR1;3 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 2.610e-16
Identity = 48/137 (35.04%), Postives = 75/137 (54.74%), Query Frame = 1
Query:    1 DSSDESYTELAILLALMVGIFESIMGLLRLGWLIRFISHAVISGFTTASAIVIALSQAKYFLGYD-VARSSKIVPLIKSIILGADK-FSWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKI 405
            +++   Y  LA       G+ ++ +G  RLG+LI F+SHA + GF   +AI IAL Q K FLG +   + + I+ ++ S+I  A   ++W   L+ +  L  LLI K +GK  K L ++ A  PL  V++ T  V I
Sbjct:  168 NTNPNEYLRLAFTSTFFAGVTQAALGFFRLGFLIDFLSHAAVVGFMGGAAITIALQQLKGFLGINKFTKKTDIIAVLSSVISSAHHGWNWQTILISASFLIFLLISKFIGKRNKKLFWIPAIAPLVSVIISTFFVYI 304          
BLAST of CX287441 vs. ExPASy Swiss-Prot
Match: SUT22_ARATH (Sulfate transporter 2.2 OS=Arabidopsis thaliana GN=SULTR2;2 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 2.209e-15
Identity = 50/155 (32.26%), Postives = 78/155 (50.32%), Query Frame = 1
Query:   16 SYTELAILLALMVGIFESIMGLLRLGWLIRFISHAVISGFTTASAIVIALSQAKYFLGYDVARSSKIVPLIKSIILGADKFSWPP--FLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYHPPS--ITLVGDIPQGLPNFSI 468
            +Y ++   +    G F++I GL RLG+L+ F+SHA + GF   +AIVI L Q K   G     +   V  + S +  +    W P  F++GS  L  +L+ + +GK    L ++ A  PL  VVL T IV + +  S  + +V  I  G    S+
Sbjct:  168 AYRKIVFTVTFFAGAFQAIFGLFRLGFLVDFLSHAALVGFMAGAAIVIGLQQLKGLFGLTHFTNKTDVVSVLSSVFHSLHHPWQPLNFVIGSSFLIFILLARFIGKRNNKLFWIPAMAPLISVVLATLIVYLSNAESRGVKIVKHIKPGFNQLSV 322          
BLAST of CX287441 vs. ExPASy Swiss-Prot
Match: SUT2_STYHA (High affinity sulfate transporter 2 OS=Stylosanthes hamata GN=ST2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.922e-15
Identity = 51/155 (32.90%), Postives = 78/155 (50.32%), Query Frame = 1
Query:    1 DSSDESYTELAILLALMVGIFESIMGLLRLGWLIRFISHAVISGFTTASAIVIALSQAKYFLGY-DVARSSKIVPLIKSIILGADK-FSWPPFLVGSIILAILLIMKQLGKSRKYLRFLRAAGPLTGVVLGTTIVKIYHPP--SITLVGDIPQGL 453
            ++    Y  LA       G+ + ++G+ RLG+LI F+SHA I GF   +AI I L Q K  LG  D  ++S IV ++ S+       ++W   L+G   L  LLI K + K  K L ++ A  P+  V++ T  V I       +T+V  I  G+
Sbjct:  175 NTKSHDYLRLAFTATFFAGVTQMLLGVCRLGFLIDFLSHAAIVGFMAGAAITIGLQQLKGLLGIKDFTKNSDIVSVMHSVWSNVHHGWNWETILIGLSFLIFLLITKYIAKKNKKLFWVSAISPMICVIVSTFFVYITRADKRGVTIVKHIKSGV 329          
The following BLAST results are available for this feature:
BLAST of CX287441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
SUT42_ARATH4.532e-6976.19Probable sulfate transporter 4.2 OS=Arabidopsis th... [more]
SUT41_ARATH7.236e-6772.02Sulfate transporter 4.1, chloroplastic OS=Arabidop... [more]
SUT11_ARATH5.618e-1935.00Sulfate transporter 1.1 OS=Arabidopsis thaliana GN... [more]
SUT34_ARATH3.642e-1832.43Probable sulfate transporter 3.4 OS=Arabidopsis th... [more]
SUT12_ARATH5.258e-1734.19Sulfate transporter 1.2 OS=Arabidopsis thaliana GN... [more]
SUT33_ARATH8.969e-1729.73Probable sulfate transporter 3.3 OS=Arabidopsis th... [more]
SUT32_ARATH2.610e-1631.76Sulfate transporter 3.2 OS=Arabidopsis thaliana GN... [more]
SUT13_ARATH2.610e-1635.04Sulfate transporter 1.3 OS=Arabidopsis thaliana GN... [more]
SUT22_ARATH2.209e-1532.26Sulfate transporter 2.2 OS=Arabidopsis thaliana GN... [more]
SUT2_STYHA4.922e-1532.90High affinity sulfate transporter 2 OS=Stylosanthe... [more]

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Properties
Property NameValue
Genbank descriptionC01009F01SK Veg1 Citrus clementina cDNA clone C01009F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287441 ID=CX287441; Name=CX287441; organism=Citrus clementina; type=EST; length=505bp
GATTCATCTGATGAGTCATACACAGAACTTGCAATATTATTGGCTCTCAT
GGTTGGAATATTTGAATCCATTATGGGTCTCTTGAGGCTTGGATGGCTTA
TCCGTTTCATCAGCCATGCTGTGATCTCTGGCTTTACCACTGCTTCAGCC
ATTGTAATTGCACTGTCTCAAGCAAAGTACTTTTTGGGATATGATGTTGC
ACGTAGTAGTAAGATTGTGCCATTGATCAAGAGCATAATATTAGGAGCAG
ATAAGTTTTCGTGGCCCCCTTTTCTAGTGGGATCTATCATTCTTGCTATA
CTTCTGATCATGAAGCAATTGGGAAAATCAAGGAAGTACTTGAGGTTCCT
ACGAGCAGCAGGTCCCTTGACAGGAGTTGTTTTGGGTACAACCATTGTGA
AAATATATCATCCACCATCCATTACTTTGGTAGGAGATATACCTCAGGGG
CTCCCAAACTTTTCAATCCCTAAAAGTTTTGAGTGTGCAATGTCTTTAAT
TCCTA
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