CX287451
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.474e-22 Identity = 61/122 (50.00%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAEDPQAG-------YSSLQLLKIVQRQLEGPNFEQFT 375 MGR +QL+RIENK QVTFSKRR+GL+KKA E+SVLCD D+AL++FS++G+LYEF S S+ ILERYQ R + + A P ED + S L L+ QRQL G + T Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQ-RYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLT 121
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 6.474e-22 Identity = 61/122 (50.00%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAEDPQAG-------YSSLQLLKIVQRQLEGPNFEQFT 375 MGR +QL+RIENK QVTFSKRR+GL+KKA E+SVLCD D+AL++FS++G+LYEF S S+ ILERYQ R + + A P ED + S L L+ QRQL G + T Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQ-RYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLT 121
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.196e-21 Identity = 58/114 (50.88%), Postives = 79/114 (69.30%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAEDPQA---GYSS-LQLLKIVQRQLEGPN 360 MGRKKL+++RIENKS QVTFSKRR+GLI+KAR+LSVLCD +AL++ S+ G+LY F S D+L IL+RY + ++ KA D Q+ Y S +LL++V +L G N Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQHADDL------KALDHQSKALNYGSHYELLELVDSKLVGSN 108
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.157e-21 Identity = 56/105 (53.33%), Postives = 73/105 (69.52%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAEDPQAGYSSLQ-LLKIVQR 342 MGR +++L+RIENK QVTF+KRR+GL+KKA ELSVLCD ++AL+IFS+RG+LYEFCS+ S+ LERYQ + A P E SS Q LK+ +R Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLRTLERYQ-KCNYGAPEPNVPSREALAVELSSQQEYLKLKER 104
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 7.157e-21 Identity = 47/71 (66.20%), Postives = 61/71 (85.92%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQ 243 MGR +++L+RIENK QVTF+KRR+GL+KKA ELSVLCD ++AL+IFS+RG+LYEFCS+ S+ LERYQ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQ 71
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.348e-21 Identity = 47/71 (66.20%), Postives = 60/71 (84.51%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQ 243 MGR +++L+RIENK QVTF+KRR+GL+KKA ELSVLCD ++AL+IFS+RG+LYEFCS S+ LERYQ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSGQSMTRTLERYQ 71
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 9.348e-21 Identity = 47/71 (66.20%), Postives = 61/71 (85.92%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQ 243 MGR +++L+RIENK QVTF+KRR+GL+KKA ELSVLCD ++AL+IFS+RG+LYEFCS+ S+ LERYQ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMIRTLERYQ 71
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.221e-20 Identity = 52/104 (50.00%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAEDPQAGYSSLQLLKIVQR 342 MGR +++L+RIENK QVTF+KRR+GL+KKA ELSVLCD ++AL+IFS+RG+LYEFCS S+ LE+YQ + + + E Q S + LK+ R Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQ-KCSYAGPETAVQNRESEQLKASRNEYLKLKAR 103
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSI (MADS-box transcription factor 7 OS=Oryza sativa subsp. indica GN=MADS7 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.221e-20 Identity = 52/104 (50.00%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAEDPQAGYSSLQLLKIVQR 342 MGR +++L+RIENK QVTF+KRR+GL+KKA ELSVLCD ++AL+IFS+RG+LYEFCS S+ LE+YQ + + + E Q S + LK+ R Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQ-KCSYAGPETAVQNRESEQLKASRNEYLKLKAR 103
BLAST of CX287451 vs. ExPASy Swiss-Prot
Match: CMB1_DIACA (MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.221e-20 Identity = 61/161 (37.89%), Postives = 91/161 (56.52%), Query Frame = 1 Query: 31 MGRKKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRITEEAVASGAPKAEDPQAGYSSLQL------LKIVQRQLEGPNFEQFTAADXXXXXXXXXXXXXXIRAVKV-HSYAHWASLVQTQLMM 492 MGR +++L+RIENK QVTF+KRR+GL+KKA ELSVLCD ++AL++FS+RG+LYEFCS + LERYQ R + ++ + P E + L+L L+ R L G + + + + IR++K H A L + + M+ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSCMNKTLERYQ-RCSYGSLETSQPSKETESSYQEYLKLKAKVDVLQRSHRNLLGEDLGELSTKELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEML 160 The following BLAST results are available for this feature:
BLAST of CX287451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287451 ID=CX287451; Name=CX287451; organism=Citrus clementina; type=EST; length=621bpback to top |