CX287481

Overview
NameCX287481
Unique NameCX287481
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length638
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX287481 vs. ExPASy Swiss-Prot
Match: MYBF_ARATH (Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana GN=At1g14600 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.860e-11
Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 2 
Query:  278 GLISDSYRHILSNKKRITWTKDLHEHFVECVNRLGGSEKATPKAILKLMKSKELSILQVKSHLQKYRSEKLISDQSLQGFPEKT 529
            G+I     ++ S   R+ WT +LH  FV  V+ LGG  KATPK +LK+M  K L+I  VKSHLQ YR  ++    +L G PE++
Sbjct:   10 GVIGGVRPYVRSPVPRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYRGSRI----TLLGKPEES 89
The following BLAST results are available for this feature:
BLAST of CX287481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MYBF_ARATH1.860e-1144.05Putative Myb family transcription factor At1g14600... [more]
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Properties
Property NameValue
Genbank descriptionC01010A07SK Veg1 Citrus clementina cDNA clone C01010A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287481 ID=CX287481; Name=CX287481; organism=Citrus clementina; type=EST; length=638bp
ATTCGGCACGAGGTAAATACTATCCATGGAAGCACAATCACAAGAAAAGC
AAAACCTGGAGCCTGTTATAGAAGCTTCATTACCACCATCAAATCAATTT
TCCGGGGATAATTTTTCCGAGAAGTTGTCTGAGCTAGACACTTTGGAATC
ATTGGTATTATCGAGCAACCACAACAGAAAATTTCCCAGAAAAATTAGCA
GCATTCCCACTCCTTCTGAGAGCAGCCAAAATACTAAAAATATGAGCATT
TTTTCTTCAGAAGAAAAGCAGTCTTGTGGGTTGATTTCTGATTCTTATCG
ACACATTTTGTCGAATAAAAAAAGAATTACGTGGACTAAGGATCTGCATG
AACATTTTGTCGAGTGTGTTAATCGCCTTGGAGGTTCTGAGAAGGCAACA
CCAAAGGCGATACTGAAACTGATGAAATCGAAAGAATTGAGTATCCTACA
AGTAAAAAGTCATTTGCAGAAATATCGATCCGAGAAGCTCATATCAGACC
AGTCTTTACAAGGATTTCCCGAGAAAACAGTTTGTATCAATGATATACCT
CAGCTTTACATGAAAATGAGCATGCAAATAAGAGAGGCACTTCAATTGCA
GCTAGAACTCGAGAAGCATCTTCATGATCAATTAGAGA
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