CX287491

Overview
NameCX287491
Unique NameCX287491
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287491 vs. ExPASy Swiss-Prot
Match: CQ095_XENLA (UPF0563 protein C17orf95 homolog OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.699e-27
Identity = 65/182 (35.71%), Postives = 98/182 (53.85%), Query Frame = 2
Query:  119 DKSSFSIAIIENMKEEYGLFVWPCSVILAEYVWQQRYRFSGANVVEAYAXXXXXXXXXXXXSC*XXXXXXXXXXXXGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKL-NCRVMGLTWGFWDASIFDLNP-NIILGADVFYDASAFDDLFATITYLLQSSPGSVFITTYHNR 658
            D+    + I E +  +YG++VWPC+V+LA+Y+W  R   +   V+E                              GAG SLPG++AAK G+ V L+D +   + L+N RR C+MN +    V+GLTWG     + DL P +IILG+DVFY+   F+D+  T+ +L++  P + F TTY  R
Sbjct:   23 DEQKMRVTIPEVLNCQYGMYVWPCAVVLAQYLWYHRKNLADKRVLEV-----------------------------GAGVSLPGILAAKCGAKVILSDSAEMPQCLENCRRSCKMNNIVGVPVIGLTWGEVSPDLLDLPPIDIILGSDVFYEPKDFEDILLTVRFLMERMPQAEFWTTYQVR 175          
BLAST of CX287491 vs. ExPASy Swiss-Prot
Match: CQ095_MOUSE (UPF0563 protein C17orf95 homolog OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.311e-23
Identity = 63/186 (33.87%), Postives = 96/186 (51.61%), Query Frame = 2
Query:  107 VDESDKSSFSIAIIENMKEEYGLFVWPCSVILAEYVWQQRYRFSGANVVEAYAXXXXXXXXXXXXSC*XXXXXXXXXXXXGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKL-NCRVMGLTWGFWDASIFDLNP-NIILGADVFYDASAFDDLFATITYLLQSSPGSVFITTYHNR 658
            V   +++   + + + +  +YG++VWPC+V+LA+Y+W  R    G  V+E                              GAG SLPG++AAK G+ V L+D S     L   R+ C+MN L    V+GLTWG     I  L P +IILG+DVF++   F+ + AT+ +L+Q +P   F +TY  R
Sbjct:   42 VPGGNRAVLEVRVPQVLHVQYGMYVWPCAVVLAQYLWFHRRSLPGKAVLEV-----------------------------GAGVSLPGILAAKCGAKVILSDSSEFPHCLDICRQSCQMNNLPQVEVVGLTWGHISKDILSLPPQDIILGSDVFFEPEDFESILATVYFLMQKNPKVQFWSTYQVR 198          
BLAST of CX287491 vs. ExPASy Swiss-Prot
Match: CQ095_RAT (UPF0563 protein C17orf95 homolog OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.229e-22
Identity = 60/183 (32.79%), Postives = 94/183 (51.37%), Query Frame = 2
Query:  116 SDKSSFSIAIIENMKEEYGLFVWPCSVILAEYVWQQRYRFSGANVVEAYAXXXXXXXXXXXXSC*XXXXXXXXXXXXGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKL-NCRVMGLTWGFWDASIFDLNP-NIILGADVFYDASAFDDLFATITYLLQSSPGSVFITTYHNR 658
            +D +   + + + +  +YG++VWPC+V+LA+Y+W  R    G  V+E                              GAG SLPG++AAK G+ VTL+D       L    + C+MN L   +++GLTWG        L P +IILG+DVF++   F+ + AT+ +L+Q +P   F +TY  R
Sbjct:   17 ADPTVLEVRVPQVLHVQYGMYVWPCAVVLAQYLWFHRRVLPGKAVLEI-----------------------------GAGVSLPGILAAKCGAKVTLSDSPELPHCLDICWQSCQMNNLPQVQIVGLTWGHISKDTLSLPPQDIILGSDVFFEPEDFESILATVYFLMQKNPKVQFWSTYQVR 170          
BLAST of CX287491 vs. ExPASy Swiss-Prot
Match: CQ095_HUMAN (UPF0563 protein C17orf95 OS=Homo sapiens GN=C17orf95 PE=2 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 5.155e-20
Identity = 57/164 (34.76%), Postives = 86/164 (52.44%), Query Frame = 2
Query:  173 LFVWPCSVILAEYVWQQRYRFSGANVVEAYAXXXXXXXXXXXXSC*XXXXXXXXXXXXGAGTSLPGLVAAKVGSNVTLTDDSNRIEVLKNMRRVCEMNKL-NCRVMGLTWGFWDASIFDLNP-NIILGADVFYDASAFDDLFATITYLLQSSPGSVFITTYHNR 658
            ++VWPC+V+LA+Y+W  R    G  ++E                              GAG SLPG++AAK G+ V L+D S     L+  R+ C+MN L + +V+GLTWG     +  L P +IIL +DVF++   F+D+ ATI +L+  +P     +TY  R
Sbjct:    1 MYVWPCAVVLAQYLWFHRRSLPGKAILEI-----------------------------GAGVSLPGILAAKCGAEVILSDSSELPHCLEVCRQSCQMNNLPHLQVVGLTWGHISWDLLALPPQDIILASDVFFEPEDFEDILATIYFLMHKNPKVQLWSTYQVR 135          
The following BLAST results are available for this feature:
BLAST of CX287491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
CQ095_XENLA9.699e-2735.71UPF0563 protein C17orf95 homolog OS=Xenopus laevis... [more]
CQ095_MOUSE1.311e-2333.87UPF0563 protein C17orf95 homolog OS=Mus musculus P... [more]
CQ095_RAT3.229e-2232.79UPF0563 protein C17orf95 homolog OS=Rattus norvegi... [more]
CQ095_HUMAN5.155e-2034.76UPF0563 protein C17orf95 OS=Homo sapiens GN=C17orf... [more]
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Properties
Property NameValue
Genbank descriptionC01010B05SK Veg1 Citrus clementina cDNA clone C01010B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287491 ID=CX287491; Name=CX287491; organism=Citrus clementina; type=EST; length=658bp
AGTTGGCGCCTAGGTTAAGCGCCACCGGATGAGGGAAGTTGGTTCTGAAA
AGGACGAGGATGAAATGACCGATAAGCACATGACCACGGTATCTCAGCAT
TATTTCGTCGATGAATCGGATAAATCCTCCTTCTCTATCGCTATCATTGA
GAATATGAAAGAAGAATACGGGCTGTTCGTATGGCCCTGTAGTGTTATCC
TGGCGGAGTATGTTTGGCAACAGAGATATCGCTTTTCCGGGGCGAACGTA
GTTGAGGCATATGCAATTCCGATCCTCATTCAGCTTATCATTAATCAATA
ATCGTGTTGATAAATGTTGTTTACATGATTGCTAGTTTTGCAGCTCGGTG
CAGGAACTTCATTGCCTGGATTGGTAGCAGCAAAAGTGGGATCGAATGTC
ACTCTTACTGATGATTCCAATAGGATAGAGGTGCTGAAGAACATGAGAAG
AGTCTGCGAAATGAATAAATTGAACTGTAGAGTAATGGGACTGACATGGG
GATTTTGGGATGCATCTATATTCGATTTAAATCCCAATATTATTCTGGGG
GCTGATGTATTTTATGATGCAAGTGCCTTTGATGACCTCTTTGCCACCAT
CACATATCTGCTCCAGAGTTCTCCAGGATCAGTCTTCATTACAACTTATC
ATAATCGA
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