CX287495
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX287495 vs. ExPASy Swiss-Prot
Match: ODBA_DICDI (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Dictyostelium discoideum GN=bkdA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.047e-26 Identity = 53/119 (44.54%), Postives = 78/119 (65.55%), Query Frame = 3 Query: 57 PFPCQALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYPSN 413 P +A+TYRVGHH+TSDDS++YR V+EI W+ ++P++R R ++ GWW+ E E ++ R + +L AEK KP I+++FTDVYD NL EQ+ L E +K +P +YP N Sbjct: 312 PVLIEAMTYRVGHHSTSDDSSRYRTVEEINAWKEGKNPISRLRNYMNHKGWWSDAQEKETIANARTTVRESLVNAEKQYKPSINEIFTDVYDKPTPNLIEQQKELIEHLKLYPDEYPLN 430
BLAST of CX287495 vs. ExPASy Swiss-Prot
Match: ODBA_PANTR (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Pan troglodytes GN=BCKDHA PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.512e-25 Identity = 50/117 (42.74%), Postives = 77/117 (65.81%), Query Frame = 3 Query: 57 PFPCQALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYP 407 PF +A+TYR+GHH+TSDDS+ YR VDE+ +W PV+R R ++ S GWW+ + E R RK+++ A ++AE+ KP + LF+DVY P+ LR+Q+ SL ++ + + YP Sbjct: 323 PFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPVSRLRHYLLSQGWWDEEQEKAWRKQSRKKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYP 439
BLAST of CX287495 vs. ExPASy Swiss-Prot
Match: ODBA_BOVIN (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Bos taurus GN=BCKDHA PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.512e-25 Identity = 49/117 (41.88%), Postives = 77/117 (65.81%), Query Frame = 3 Query: 57 PFPCQALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYP 407 PF +A+TYR+GHH+TSDDS+ YR VDE+ +W P++R R ++S GWW+ + E R RK+++ A ++AE+ KP S +F+DVY P+ LR+Q+ SL ++ + + YP Sbjct: 333 PFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHHLQSRGWWDDEQEKAWRKQSRKKVMEAFEQAERKLKPNPSLIFSDVYQEMPAQLRKQQESLARHLQTYGEHYP 449
BLAST of CX287495 vs. ExPASy Swiss-Prot
Match: ODBA_RAT (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment) OS=Rattus norvegicus GN=Bckdha PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.580e-25 Identity = 49/117 (41.88%), Postives = 77/117 (65.81%), Query Frame = 3 Query: 57 PFPCQALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYP 407 PF +A+TYR+GHH+TSDDS+ YR VDE+ +W P++R R+++ + GWW+ + E R RK+++ A ++AE+ KP S LF+DVY P+ LR Q+ SL ++ + + YP Sbjct: 319 PFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRQYLLNQGWWDEEQEKAWRKQSRKKVMEAFEQAERKLKPNPSLLFSDVYQEMPAQLRRQQESLARHLQTYGEHYP 435
BLAST of CX287495 vs. ExPASy Swiss-Prot
Match: ODBA_MOUSE (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Mus musculus GN=Bckdha PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.580e-25 Identity = 49/117 (41.88%), Postives = 77/117 (65.81%), Query Frame = 3 Query: 57 PFPCQALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYP 407 PF +A+TYR+GHH+TSDDS+ YR VDE+ +W P++R R+++ + GWW+ + E R RK+++ A ++AE+ KP S LF+DVY P+ LR Q+ SL ++ + + YP Sbjct: 320 PFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRQYLLNQGWWDEEQEKAWRKQSRKKVMEAFEQAERKLKPNPSLLFSDVYQEMPAQLRRQQESLARHLQTYGEHYP 436
BLAST of CX287495 vs. ExPASy Swiss-Prot
Match: ODBA_MACFA (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Macaca fascicularis GN=BCKDHA PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.580e-25 Identity = 49/117 (41.88%), Postives = 77/117 (65.81%), Query Frame = 3 Query: 57 PFPCQALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYP 407 PF +A+TYR+GHH+TSDDS+ YR VDE+ +W P++R R ++ S GWW+ + E R RK+++ A ++AE+ KP + LF+DVY P+ LR+Q+ SL ++ + + YP Sbjct: 323 PFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRKKVMKAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYP 439
BLAST of CX287495 vs. ExPASy Swiss-Prot
Match: ODBA_HUMAN (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Homo sapiens GN=BCKDHA PE=1 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 4.400e-25 Identity = 48/117 (41.03%), Postives = 77/117 (65.81%), Query Frame = 3 Query: 57 PFPCQALTYRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKKHPQDYP 407 PF +A+TYR+GHH+TSDDS+ YR VDE+ +W P++R R ++ S GWW+ + E R R++++ A ++AE+ KP + LF+DVY P+ LR+Q+ SL ++ + + YP Sbjct: 323 PFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYP 439
BLAST of CX287495 vs. ExPASy Swiss-Prot
Match: ODBA_THET2 (2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1757 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.760e-17 Identity = 39/101 (38.61%), Postives = 66/101 (65.35%), Query Frame = 3 Query: 81 YRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETI 383 YR G H+++DD ++YRP +E+ +WR +DP+ RFR+++E+ G WN + E ++R +R ++ L+EAE+A P +F DV+ P +L QE L+E + Sbjct: 268 YRYGPHSSADDDSRYRPKEEVAFWRK-KDPIPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEAEEAGPVPPEWMFADVFAEKPWHLLRQEALLKEEL 367
BLAST of CX287495 vs. ExPASy Swiss-Prot
Match: ODBA_THET8 (2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0229 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 7.523e-17 Identity = 39/101 (38.61%), Postives = 66/101 (65.35%), Query Frame = 3 Query: 81 YRVGHHTTSDDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETI 383 YR G H+++DD ++YRP +E+ +WR +DP+ RFR+++E+ G WN + E ++R +R ++ L+EAE+A P +F DV+ P +L QE L+E + Sbjct: 268 YRYGPHSSADDDSRYRPKEEVAFWRK-KDPIPRFRRFLEARGLWNEEWEEDVREEIRAELERGLKEAEEAGPVPPEWMFEDVFAEKPWHLLRQEALLKEEL 367
BLAST of CX287495 vs. ExPASy Swiss-Prot
Match: ODPA_STAES (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhA PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 8.318e-16 Identity = 44/112 (39.29%), Postives = 64/112 (57.14%), Query Frame = 3 Query: 57 PFPCQALTYRVGHHTTS-DDSTKYRPVDEIEWWRTTQDPVTRFRKWIESNGWWNGDIESELRSSVRKQILHALQEAEKAEKPPISDLFTDVYDVSPSNLREQEHSLRETIKK 389 P + LTYR G HT + DD T+YR DE W +DP+ RFRK++E+ G WN D E+E+ + +I A++EA+ EK ++ L +Y+ P NL EQ +E K Sbjct: 260 PTVIETLTYRYGPHTMAGDDPTRYRTSDEDAEWEK-KDPLVRFRKYLEAKGLWNEDKENEVVERAKSEIKAAIKEADNTEKQTVTSLMDIMYEEMPQNLAEQYEIYKEKESK 370 The following BLAST results are available for this feature:
BLAST of CX287495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287495 ID=CX287495; Name=CX287495; organism=Citrus clementina; type=EST; length=528bpback to top |