CX287505

Overview
NameCX287505
Unique NameCX287505
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length558
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig730 contig Ccv1_Contig730:755..1313. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX287505 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 5.296e-43
Identity = 80/124 (64.52%), Postives = 96/124 (77.42%), Query Frame = -3
Query:  185 RKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPETIDMEEKFGLTLQKARPLRALPI 556
            RKA +D E+ GFMV    QVLVN WAIGRD S+WDNP  F PERFLG D+DV+GR++EL PFGAGRRICPG+PLA++ + LML SL+ SFDWKL  GV  E +DM+E FGLTL K  PL A+P+
Sbjct:  382 RKAESDAEILGFMVLKDTQVLVNVWAIGRDPSVWDNPSQFEPERFLGKDMDVRGRDYELTPFGAGRRICPGMPLAMKTVSLMLASLLYSFDWKLPKGVLSEDLDMDETFGLTLHKTNPLHAVPV 505          
BLAST of CX287505 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.180e-42
Identity = 78/124 (62.90%), Postives = 96/124 (77.42%), Query Frame = -3
Query:  185 RKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPETIDMEEKFGLTLQKARPLRALPI 556
            RKA +D EV GFMVP   QVLVN WAIGRD S+W+NP  F PERF+G D+DVKGR++EL PFG GRRICPGLPLA++ + LML SL+ SFDWKL +GV  E +DM+E FG+TL +   L A+P+
Sbjct:  382 RKAESDVEVLGFMVPKDTQVLVNVWAIGRDPSVWENPSQFEPERFMGKDIDVKGRDYELTPFGGGRRICPGLPLAVKTVSLMLASLLYSFDWKLPNGVVSEDLDMDETFGITLHRTNTLYAIPV 505          
BLAST of CX287505 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 4.483e-42
Identity = 78/124 (62.90%), Postives = 96/124 (77.42%), Query Frame = -3
Query:  185 RKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPETIDMEEKFGLTLQKARPLRALPI 556
            RKA +D EV GFMVP   QV VN WAIGRD ++W+N   F PERFLG D+D++GR++EL PFGAGRRICPGLPLA++ + LML SL+ SFDWKL +GV  E +DM+E FGLTL K  PL A+P+
Sbjct:  383 RKAESDVEVLGFMVPKDTQVFVNVWAIGRDPNVWENSSRFKPERFLGKDIDLRGRDYELTPFGAGRRICPGLPLAVKTVPLMLASLLYSFDWKLPNGVGSEDLDMDETFGLTLHKTNPLHAVPV 506          
BLAST of CX287505 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 6.474e-41
Identity = 73/124 (58.87%), Postives = 99/124 (79.84%), Query Frame = -3
Query:  185 RKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPETIDMEEKFGLTLQKARPLRALPI 556
            RK+ +D ++ GF+VP   QV+VN WAIGRDAS+W+NP  F PERFL  + DVKGR+FELIPFG+GRR+CPG+ +A++ ++++L SL+ SFDWKL++GV P  IDM E FGLTL KA+ L A+P+
Sbjct:  383 RKSESDVQIMGFLVPKNTQVVVNVWAIGRDASVWENPMKFEPERFLLRETDVKGRDFELIPFGSGRRMCPGISMALKTMHMVLASLLYSFDWKLQNGVVPGNIDMSETFGLTLHKAKSLCAVPV 506          
BLAST of CX287505 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.303e-38
Identity = 70/123 (56.91%), Postives = 92/123 (74.80%), Query Frame = -3
Query:  188 RKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPETIDMEEKFGLTLQKARPLRALP 556
            RKA  DT+  G+ +P G QVLVN WAIGRD   WDNP+ F PERFL   +DVKG+N+ELIPFGAGRR+C GLPL  RM++   GSL++ FDW+L   V+P++I+MEE  G+T +K +PL+ +P
Sbjct:  342 RKAIQDTKFMGYDIPKGTQVLVNAWAIGRDPEYWDNPFEFKPERFLESKVDVKGQNYELIPFGAGRRMCVGLPLGHRMMHFTFGSLLHEFDWELPHNVSPKSINMEESMGITARKKQPLKVIP 464          
BLAST of CX287505 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.676e-36
Identity = 68/126 (53.97%), Postives = 92/126 (73.02%), Query Frame = -3
Query:  179 RKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPETIDMEEKFGLTLQKARPLRALPIAI 556
            RK     E++G+ +P G  V VN WAIGRD ++WD+   F P+RFL   LDV+G +F+LIPFGAGRRICPG+PLA RM+ +MLGSL+N+FDWK++  V  + +DM EK G T+ KA+PL  +PI +
Sbjct:  364 RKVVTQVELSGYTIPAGTLVFVNAWAIGRDPTVWDDSLEFKPQRFLESRLDVRGHDFDLIPFGAGRRICPGIPLATRMVPIMLGSLLNNFDWKIDTKVPYDVLDMTEKNGTTISKAKPLCVVPIPL 489          
BLAST of CX287505 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.183e-34
Identity = 66/123 (53.66%), Postives = 89/123 (72.36%), Query Frame = -3
Query:  188 RKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPETIDMEEKFGLTLQKARPLRALP 556
            R+   DT+  G+ VP   QVLVN WAIGRD   WD+P SF PERFLG  +DVKG+++ LIPFGAGRR+C GLPL  RM++  LGSL+  F+W+L DGV+P++I+M+   G+T +K   L+ +P
Sbjct:  380 RETIQDTKFMGYDVPKDTQVLVNAWAIGRDPECWDDPMSFKPERFLGSKIDVKGQHYGLIPFGAGRRMCVGLPLGHRMMHFALGSLLREFEWELPDGVSPKSINMDGSMGVTARKRDSLKVIP 502          
BLAST of CX287505 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.073e-31
Identity = 64/125 (51.20%), Postives = 83/125 (66.40%), Query Frame = -3
Query:  188 ASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLG----LDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPETIDMEEKFGLTLQKARPLRALP 550
            AS   E+ G+ +P G+ +L N WAI RD   W +P +F PERFL       +DVKG +FELIPFGAGRRIC GL L +R +  +  +L+  FDW+L  GVTPE ++MEE +GLTLQ+A PL   P
Sbjct:  375 ASESCEINGYHIPKGSTLLTNIWAIARDPDQWSDPLAFKPERFLPGGEKSGVDVKGSDFELIPFGAGRRICAGLSLGLRTIQFLTATLVQGFDWELAGGVTPEKLNMEESYGLTLQRAVPLVVHP 499          
BLAST of CX287505 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 7.932e-31
Identity = 61/116 (52.59%), Postives = 82/116 (70.69%), Query Frame = -3
Query:  188 EVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLGLDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPETIDMEEKFGLTLQKARPLRALP 535
            +V G+ +P G  V VN  AIGRD   W +P  F PERFL  D++  G+ F+ IPFG+GRRICPG PLA+R++ L+L SL+++F W+L DGV  E +DMEE F L+L  A+PLR +P
Sbjct:  368 QVMGYTIPKGMDVHVNAHAIGRDPKDWKDPLKFQPERFLDSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEELFTLSLCMAKPLRVIP 483          
BLAST of CX287505 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.767e-30
Identity = 64/127 (50.39%), Postives = 87/127 (68.50%), Query Frame = -3
Query:  188 RKASADTEVAGFMVPNGAQVLVNTWAIGRDASLWDNPYSFVPERFLG----LDLDVKGRNFELIPFGAGRRICPGLPLAIRMLYLMLGSLINSFDWKLEDGVTPETIDMEEKFGLTLQKARPLRALP 556
            R AS   E+ G+ +P G+ +L+N WAI RD + W +P  F PERFL       +DV+G +FE+IPFGAGRRIC G+ L IRM+ LM+ +LI++F+W L  G  PE ++MEE +GLTLQ+A PL   P
Sbjct:  375 RIASESCEINGYFIPKGSTLLLNVWAIARDPNAWADPLEFRPERFLPGGEKPKVDVRGNDFEVIPFGAGRRICAGMNLGIRMVQLMIATLIHAFNWDLVSGQLPEMLNMEEAYGLTLQRADPLVVHP 501          
The following BLAST results are available for this feature:
BLAST of CX287505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
C76C1_ARATH5.296e-4364.52Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C76C4_ARATH1.180e-4262.90Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C76C2_ARATH4.483e-4262.90Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C76C3_ARATH6.474e-4158.87Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76A1_SOLME2.303e-3856.91Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C76B1_HELTU3.676e-3653.977-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C76A2_SOLME1.183e-3453.66Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
F3PH_ARATH6.073e-3151.20Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C80A1_BERST7.932e-3152.59Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
F3PH_PETHY1.767e-3050.39Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC01010C08SK Veg1 Citrus clementina cDNA clone C01010C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287505 ID=CX287505; Name=CX287505; organism=Citrus clementina; type=EST; length=558bp
AGAGAACTAGTCTCGAGTTTTTTTTTTTTTTTTTTTAAAATTCTGAATTC
ACATTCAAAATAGATTTATTCGAATAAGAATAAACATTGTACAAGCATAC
CGAGTAAGGACAAAGTCCATGCTACAACCTGGAAATTCATTTCATTATAG
CACCAAAAAAAAAAAATGCTACTAATTAAATGGCAATAGGAAGAGCACGA
AGGGGCCGAGCCTTCTGCAAGGTGAGACCAAATTTCTCTTCCATATCTAT
GGTCTCTGGAGTAACCCCATCTTCAAGTTTCCAATCAAAAGAATTAATAA
GTGAACCTAACATCAAATATAACATTCTTATTGCCAACGGCAAGCCAGGA
CATATTCGTCGTCCGGCGCCAAACGGTATTAGTTCAAAATTCCGACCTTT
GACATCAAGATCTAACCCCAAGAACCTCTCTGGAACAAAAGAGTATGGGT
TGTCCCATAAGCTAGCATCTCTTCCTATAGCCCATGTGTTGACTAAGACT
TGTGCACCATTTGGCACCATGAATCCGGCAACTTCTGTATCTGCTGAGGC
TTTACGGG
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