CX287512

Overview
NameCX287512
Unique NameCX287512
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length433
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDI_RICCO (Protein disulfide-isomerase OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.005e-40
Identity = 58/70 (82.86%), Postives = 64/70 (91.43%), Query Frame = 3
Query:   75 ADSLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            AD+LQD+VFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSY++DAD+ IAK DATANDIP DTF+V   P
Sbjct:  383 ADTLQDIVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYKSDADIVIAKLDATANDIPSDTFDVRGYP 452          

HSP 2 Score: 60.4622 bits (145), Expect = 1.005e-40
Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = 1
Query:  277 GYPTVFFRSASGKTVPYEGDRTTEDIVDFIENNRDTSCPQRN 402
            GYPTV+FRSASGK   Y+GDRT +DI+ FIE NRD +  Q +
Sbjct:  450 GYPTVYFRSASGKVEQYDGDRTKDDIISFIEKNRDKAAQQES 491          
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDI_MEDSA (Protein disulfide-isomerase OS=Medicago sativa GN=PDI PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.271e-37
Identity = 59/94 (62.77%), Postives = 66/94 (70.21%), Query Frame = 3
Query:    3 GKVPPFXXXXXXXXXXXXXXXXXXADSLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            GKV PF                    +L+D+VF SGKNVL+EFYAPWCGHCKQLAPILDEVAVS+Q+DADV IAK DATANDIP DTF+V   P
Sbjct:  360 GKVEPFVKSEPIPETNNEPVKVVVGQTLEDVVFKSGKNVLIEFYAPWCGHCKQLAPILDEVAVSFQSDADVVIAKLDATANDIPTDTFDVQGYP 453          

HSP 2 Score: 55.0694 bits (131), Expect = 1.271e-37
Identity = 23/35 (65.71%), Postives = 29/35 (82.86%), Query Frame = 1
Query:  277 GYPTVFFRSASGKTVPYEGDRTTEDIVDFIENNRD 381
            GYPT++FRSASGK   Y+G RT EDI++FIE N+D
Sbjct:  451 GYPTLYFRSASGKLSQYDGGRTKEDIIEFIEKNKD 485          
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDI1_ARATH (Probable protein disulfide-isomerase 1 OS=Arabidopsis thaliana GN=At1g21750 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 5.150e-36
Identity = 56/94 (59.57%), Postives = 64/94 (68.09%), Query Frame = 3
Query:    3 GKVPPFXXXXXXXXXXXXXXXXXXADSLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            GK+ P                   +DSL D+V NSGKNVLLEFYAPWCGHC++LAPILDEVAVSYQ+D+ V IAK DATAND P DTF+V   P
Sbjct:  357 GKIAPHKKSQPIPAENNEPVKVVVSDSLDDIVLNSGKNVLLEFYAPWCGHCQKLAPILDEVAVSYQSDSSVVIAKLDATANDFPKDTFDVKGFP 450          

HSP 2 Score: 55.4546 bits (132), Expect = 5.150e-36
Identity = 21/36 (58.33%), Postives = 29/36 (80.56%), Query Frame = 1
Query:  277 GYPTVFFRSASGKTVPYEGDRTTEDIVDFIENNRDT 384
            G+PT++F+SASG  V YEGDRT ED + F++ N+DT
Sbjct:  448 GFPTIYFKSASGNVVVYEGDRTKEDFISFVDKNKDT 483          
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDI_DATGL (Protein disulfide-isomerase OS=Datisca glomerata GN=PDI PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 3.276e-35
Identity = 54/70 (77.14%), Postives = 60/70 (85.71%), Query Frame = 3
Query:   75 ADSLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            ADSL ++VF SGKNVLLEFYAPWCGHCKQLAPILDEVAVS++ND DV IAK DATAND P +TF+V   P
Sbjct:  384 ADSLDEIVFKSGKNVLLEFYAPWCGHCKQLAPILDEVAVSFENDPDVLIAKLDATANDYPTNTFDVKGYP 453          

HSP 2 Score: 52.7582 bits (125), Expect = 3.276e-35
Identity = 21/37 (56.76%), Postives = 30/37 (81.08%), Query Frame = 1
Query:  277 GYPTVFFRSASGKTVPYEGDRTTEDIVDFIENNRDTS 387
            GYPT++F+SASG+ + Y+G RT ED ++FIE NR+ S
Sbjct:  451 GYPTLYFKSASGELLQYDGGRTKEDFIEFIEKNREKS 487          
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDI2_ARATH (Protein disulfide-isomerase 2 OS=Arabidopsis thaliana GN=At1g77510 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.267e-35
Identity = 52/70 (74.29%), Postives = 60/70 (85.71%), Query Frame = 3
Query:   75 ADSLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            A+SL D+VF SGKNVL+EFYAPWCGHC++LAPILDEVA+S+QND  V IAK DATANDIP DTF+V   P
Sbjct:  379 AESLDDIVFKSGKNVLIEFYAPWCGHCQKLAPILDEVALSFQNDPSVIIAKLDATANDIPSDTFDVKGFP 448          

HSP 2 Score: 53.5286 bits (127), Expect = 4.267e-35
Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 1
Query:  277 GYPTVFFRSASGKTVPYEGDRTTEDIVDFIENNRD 381
            G+PT++FRSASG  V YEGDRT ED ++F+E N +
Sbjct:  446 GFPTIYFRSASGNVVVYEGDRTKEDFINFVEKNSE 480          
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDI_WHEAT (Protein disulfide-isomerase OS=Triticum aestivum GN=PDI PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.757e-31
Identity = 50/94 (53.19%), Postives = 62/94 (65.96%), Query Frame = 3
Query:    3 GKVPPFXXXXXXXXXXXXXXXXXXADSLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            GK+ PF                  AD++ D+VF S KNVL+EFYAPWCGHCK+LAPILDE A + Q++ DV IAK DATAND+PG+ F+V   P
Sbjct:  365 GKLTPFRKSEPIPEANNEPVKVVVADNIHDVVFKSAKNVLIEFYAPWCGHCKKLAPILDEAAATLQSEEDVVIAKIDATANDVPGE-FDVQGYP 457          

HSP 2 Score: 50.0618 bits (118), Expect = 5.757e-31
Identity = 20/37 (54.05%), Postives = 30/37 (81.08%), Query Frame = 1
Query:  277 GYPTVFFRSASGKTVPYEGDRTTEDIVDFIENNRDTS 387
            GYPT++F + SGK V YEG RT ++IVD+I+ N++T+
Sbjct:  455 GYPTLYFVTPSGKKVSYEGGRTADEIVDYIKKNKETA 491          
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDI_HORVU (Protein disulfide-isomerase OS=Hordeum vulgare GN=PDI PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 7.497e-31
Identity = 50/94 (53.19%), Postives = 62/94 (65.96%), Query Frame = 3
Query:    3 GKVPPFXXXXXXXXXXXXXXXXXXADSLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            GK+ PF                  AD++ D+VF SGKNVL+EFYAPWCGHCK+LAPILDE A + Q++ DV IAK DAT ND+PG+ F+V   P
Sbjct:  364 GKLTPFRKSEPIPEANNEPVKVVVADNVHDVVFKSGKNVLIEFYAPWCGHCKKLAPILDEAAATLQSEEDVVIAKMDATENDVPGE-FDVQGYP 456          

HSP 2 Score: 49.6766 bits (117), Expect = 7.497e-31
Identity = 20/37 (54.05%), Postives = 29/37 (78.38%), Query Frame = 1
Query:  277 GYPTVFFRSASGKTVPYEGDRTTEDIVDFIENNRDTS 387
            GYPT++F + SGK V YEG RT ++IVD+I  N++T+
Sbjct:  454 GYPTLYFVTPSGKKVSYEGGRTADEIVDYIRKNKETA 490          
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDI_MAIZE (Protein disulfide-isomerase OS=Zea mays GN=PDI PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.655e-30
Identity = 50/94 (53.19%), Postives = 61/94 (64.89%), Query Frame = 3
Query:    3 GKVPPFXXXXXXXXXXXXXXXXXXADSLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIPGDTFEVHRLP 284
            GK+ PF                  AD++ D VF SGKNVL+EFYAPWCGHCK+LAPILDE A + Q+D +V IAK DATAND+P + F+V   P
Sbjct:  361 GKLTPFRNSEPIPEVNNEPVKVVVADNVHDFVFKSGKNVLIEFYAPWCGHCKKLAPILDEAATTLQSDEEVVIAKMDATANDVPSE-FDVQGYP 453          

HSP 2 Score: 49.2914 bits (116), Expect = 1.655e-30
Identity = 19/42 (45.24%), Postives = 30/42 (71.43%), Query Frame = 1
Query:  277 GYPTVFFRSASGKTVPYEGDRTTEDIVDFIENNRDTSCPQRN 402
            GYPT++F + SGK   Y+  RT +DIVDFI+ +++T+ P  +
Sbjct:  451 GYPTLYFVTPSGKVTSYDSGRTADDIVDFIKKSKETAAPHHH 492          
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDI1_SCHPO (Putative protein disulfide-isomerase C1F5.02 OS=Schizosaccharomyces pombe GN=SPAC1F5.02 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.696e-19
Identity = 33/59 (55.93%), Postives = 45/59 (76.27%), Query Frame = 3
Query:   75 ADSLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDI 251
            AD+  D+V +  K+VL+EFYAPWCGHCK LAP  +++A  Y +D++V +AK DAT NDI
Sbjct:  362 ADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKIDATENDI 420          

HSP 2 Score: 36.1946 bits (82), Expect = 2.696e-19
Identity = 17/35 (48.57%), Postives = 23/35 (65.71%), Query Frame = 1
Query:  277 GYPTVFFRSASGKTVP--YEGDRTTEDIVDFIENN 375
            G+PT+ F  A+ K  P  YEGDRT ED+  FI+ +
Sbjct:  426 GFPTIMFFKANDKVNPVRYEGDRTLEDLSAFIDKH 460          
BLAST of CX287512 vs. ExPASy Swiss-Prot
Match: PDI_ASPOR (Protein disulfide-isomerase OS=Aspergillus oryzae GN=pdiA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.556e-19
Identity = 36/60 (60.00%), Postives = 47/60 (78.33%), Query Frame = 3
Query:   75 ADSLQDMVFNSGKNVLLEFYAPWCGHCKQLAPILDEVAVSYQNDADVAIAKFDATANDIP 254
            A S +D+V ++ K+VLLEFYAPWCGHCK LAP  +E+A  Y++  +V IAK DATAND+P
Sbjct:  370 AHSYKDLVLDNEKDVLLEFYAPWCGHCKALAPKYEELASLYKDIPEVTIAKIDATANDVP 429          

HSP 2 Score: 34.2686 bits (77), Expect = 4.556e-19
Identity = 15/35 (42.86%), Postives = 22/35 (62.86%), Query Frame = 1
Query:  277 GYPTVFFRSASGKTVP--YEGDRTTEDIVDFIENN 375
            G+PT+   +A  K  P  YEG RT ED+ +F++ N
Sbjct:  434 GFPTIKLFAAGAKDSPVEYEGSRTVEDLANFVKEN 468          
The following BLAST results are available for this feature:
BLAST of CX287512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
PDI_RICCO1.005e-4082.86Protein disulfide-isomerase OS=Ricinus communis PE... [more]
PDI_MEDSA1.271e-3762.77Protein disulfide-isomerase OS=Medicago sativa GN=... [more]
PDI1_ARATH5.150e-3659.57Probable protein disulfide-isomerase 1 OS=Arabidop... [more]
PDI_DATGL3.276e-3577.14Protein disulfide-isomerase OS=Datisca glomerata G... [more]
PDI2_ARATH4.267e-3574.29Protein disulfide-isomerase 2 OS=Arabidopsis thali... [more]
PDI_WHEAT5.757e-3153.19Protein disulfide-isomerase OS=Triticum aestivum G... [more]
PDI_HORVU7.497e-3153.19Protein disulfide-isomerase OS=Hordeum vulgare GN=... [more]
PDI_MAIZE1.655e-3053.19Protein disulfide-isomerase OS=Zea mays GN=PDI PE=... [more]
PDI1_SCHPO2.696e-1955.93Putative protein disulfide-isomerase C1F5.02 OS=Sc... [more]
PDI_ASPOR4.556e-1960.00Protein disulfide-isomerase OS=Aspergillus oryzae ... [more]

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Properties
Property NameValue
Genbank descriptionC01010D03SK Veg1 Citrus clementina cDNA clone C01010D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287512 ID=CX287512; Name=CX287512; organism=Citrus clementina; type=EST; length=433bp
AAGGCAAGGTTCCCCCATTCAAAAAGTCTGAGCCTATCCCTGAAGAGAAC
AACGAGCCTGTGAAAGTGGTTGTTGCTGACAGCCTTCAGGACATGGTTTT
CAACTCTGGAAAAAATGTTTTGCTCGAGTTTTACGCTCCTTGGTGTGGAC
ACTGCAAACAGTTGGCTCCGATCTTGGATGAAGTTGCTGTCTCATATCAA
AATGATGCTGATGTTGCTATTGCAAAATTTGATGCAACCGCAAATGATAT
TCCTGGTGACACCTTTGAAGTCCATAGGTTACCCAACCGTGTTCTTCCGA
TCTGCTAGTGGAAAGACAGTGCCCTATGAGGGGGATAGGACCACAGAAGA
TATTGTTGACTTCATTGAAAATAACAGGGACACAAGCTGCCCCCAACGAA
ACTGTAAAAGAGGAATCTGGAAAAGATGAGCTC
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