CX287542
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287542 vs. ExPASy Swiss-Prot
Match: YAB2_ARATH (Putative axial regulator YABBY 2 OS=Arabidopsis thaliana GN=YAB2 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.340e-20 Identity = 56/107 (52.34%), Postives = 73/107 (68.22%), Query Frame = 2 Query: 95 MSLDLASERVCYVHCNYCNTILAVSVPCSSLFNIVTVRCGHCANLLNVNMVSAL---QAVPL-QDPQLQKQHINLEDSIT-KDCGSSSKCNKFSSAFEIAEHETPRM 400 MS+D +SERVCYVHC++C TILAVSVP +SLF +VTVRCGHC NLL++N+ +L A P+ QD Q +QH +T KDC SSS+ ++ E + E PRM Sbjct: 1 MSVDFSSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPIHQDLQPHRQHTT--SLVTRKDCASSSRST--NNLSENIDREAPRM 103
BLAST of CX287542 vs. ExPASy Swiss-Prot
Match: YAB2_ORYSJ (Protein YABBY 2 OS=Oryza sativa subsp. japonica GN=YAB2 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.225e-18 Identity = 45/100 (45.00%), Postives = 68/100 (68.00%), Query Frame = 2 Query: 110 ASERVCYVHCNYCNTILAVSVPCSSLFNIVTVRCGHCANLLNVNMVSALQAVPLQD---PQLQKQHINLEDSITKDCGSSSKCNKFSSAFEIAEHETPRM 400 A E VCYVHCN+CNTI AVSVP +S+ NIVTVRCGHC +LL+VN+ +QA+P +D L+ +++ ++ + + GSSS+ + F ++++T M Sbjct: 8 APEHVCYVHCNFCNTIFAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLVQALPAEDHLQDNLKMHNMSFRENYS-EYGSSSRYGRVPMMF--SKNDTEHM 104
BLAST of CX287542 vs. ExPASy Swiss-Prot
Match: YAB6_ORYSJ (Protein YABBY 6 OS=Oryza sativa subsp. japonica GN=YAB6 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.366e-17 Identity = 45/81 (55.56%), Postives = 58/81 (71.60%), Query Frame = 2 Query: 95 MSLDLA-SERVCYVHCNYCNTILAVSVPCSSLFNIVTVRCGHCANLLNVNMVSALQAVP-LQDPQLQKQHINLEDSITKDC 331 MS +A +E+VCYVHCN+CNTILAVSVP +S+ NIVTVRCGHC NLL+VN+ + + P LQD H +L++S C Sbjct: 1 MSAQIAPAEQVCYVHCNFCNTILAVSVPGNSMLNIVTVRCGHCTNLLSVNLRGLMHSAPALQD----HHHHHLQESGLSGC 77
BLAST of CX287542 vs. ExPASy Swiss-Prot
Match: YAB5_ARATH (Axial regulator YABBY 5 OS=Arabidopsis thaliana GN=YAB5 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.366e-17 Identity = 41/80 (51.25%), Postives = 57/80 (71.25%), Query Frame = 2 Query: 107 LASERVCYVHCNYCNTILAVSVPCSSLFNIVTVRCGHCANLLNVNMVSALQAVPLQDPQLQKQHINLEDSITKDCGSSSK 346 +A+E++CY+ CN+CN ILAV+VPCSSLF+IVTVRCGHC NL +VNM +ALQ+ L + + + + GSSS+ Sbjct: 6 MATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQS-------LSRPNFQATNYAVPEYGSSSR 78
BLAST of CX287542 vs. ExPASy Swiss-Prot
Match: YAB4_ORYSJ (Protein YABBY 4 OS=Oryza sativa subsp. japonica GN=YAB4 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.616e-16 Identity = 38/59 (64.41%), Postives = 44/59 (74.58%), Query Frame = 2 Query: 113 SERVCYVHCNYCNTILAVSVPCSSLFNIVTVRCGHCANLLNVNMVSALQAVPLQDPQLQ 289 +E++CYVHCN C+TILAV VPCSSLF VTVRCGHCANLL+VN+ L P P Q Sbjct: 22 TEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPANQ 80
BLAST of CX287542 vs. ExPASy Swiss-Prot
Match: YAB4_ORYSI (Protein YABBY 4 OS=Oryza sativa subsp. indica GN=YAB4 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.616e-16 Identity = 38/59 (64.41%), Postives = 44/59 (74.58%), Query Frame = 2 Query: 113 SERVCYVHCNYCNTILAVSVPCSSLFNIVTVRCGHCANLLNVNMVSALQAVPLQDPQLQ 289 +E++CYVHCN C+TILAV VPCSSLF VTVRCGHCANLL+VN+ L P P Q Sbjct: 22 TEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPANQ 80
BLAST of CX287542 vs. ExPASy Swiss-Prot
Match: YAB5_ORYSJ (Protein YABBY 5 OS=Oryza sativa subsp. japonica GN=YAB5 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.610e-16 Identity = 34/43 (79.07%), Postives = 40/43 (93.02%), Query Frame = 2 Query: 116 ERVCYVHCNYCNTILAVSVPCSSLFNIVTVRCGHCANLLNVNM 244 E++CYVHCN+C+TILAV VPCSSLF VTVRCGHCANLL+VN+ Sbjct: 29 EQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNL 71
BLAST of CX287542 vs. ExPASy Swiss-Prot
Match: YAB5_ORYSI (Protein YABBY 5 OS=Oryza sativa subsp. indica GN=YAB5 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 7.610e-16 Identity = 34/43 (79.07%), Postives = 40/43 (93.02%), Query Frame = 2 Query: 116 ERVCYVHCNYCNTILAVSVPCSSLFNIVTVRCGHCANLLNVNM 244 E++CYVHCN+C+TILAV VPCSSLF VTVRCGHCANLL+VN+ Sbjct: 29 EQLCYVHCNFCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNL 71
BLAST of CX287542 vs. ExPASy Swiss-Prot
Match: YAB1_ORYSJ (Protein YABBY 1 OS=Oryza sativa subsp. japonica GN=YAB1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.892e-15 Identity = 36/67 (53.73%), Postives = 49/67 (73.13%), Query Frame = 2 Query: 95 MSLDLASERVCYVHCNYCNTILAVSVPCSSLFNIVTVRCGHCANLLNVNMVSALQAVPLQDPQLQKQ 295 MS+ SE VCYV+CNYCNTIL V+VP + +NIVTVRCGHC +L++++ QA +QD Q+Q + Sbjct: 1 MSVQFTSEHVCYVNCNYCNTILVVNVPNNCSYNIVTVRCGHCTMVLSMDLAPFHQARTVQDHQVQNR 67
BLAST of CX287542 vs. ExPASy Swiss-Prot
Match: YAB3_ORYSJ (Protein YABBY 3 OS=Oryza sativa subsp. japonica GN=YAB3 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.176e-14 Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = 2 Query: 104 DLASERVCYVHCNYCNTILAVSVPCSSLFNIVTVRCGHCANLLNVNM 244 D E++CYVHC+YC+T+L VSVP SSLF VTVRCGHC++LL VNM Sbjct: 54 DSEQEQLCYVHCHYCDTVLVVSVPSSSLFETVTVRCGHCSSLLTVNM 100 The following BLAST results are available for this feature:
BLAST of CX287542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287542 ID=CX287542; Name=CX287542; organism=Citrus clementina; type=EST; length=402bpback to top |