CX287600

Overview
NameCX287600
Unique NameCX287600
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length604
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig623 contig Ccv1_Contig623:90..693. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
[Close]
BLAST of CX287600 vs. ExPASy Swiss-Prot
Match: PSAI_CITSI (Photosystem I reaction center subunit VIII OS=Citrus sinensis GN=psaI PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.226e-13
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 2 
Query:   11 MTILNSFPSIFVPLVGLVFPAMAMASLFLYLEKNKIL 121
            MTILNSFPSIFVPLVGLVFPAMAMASLFLYLEKNKIL
Sbjct:    1 MTILNSFPSIFVPLVGLVFPAMAMASLFLYLEKNKIL 37
The following BLAST results are available for this feature:
BLAST of CX287600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PSAI_CITSI5.226e-13100.00Photosystem I reaction center subunit VIII OS=Citr... [more]
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Properties
Property NameValue
Genbank descriptionC01011C11SK Veg1 Citrus clementina cDNA clone C01011C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX287600 ID=CX287600; Name=CX287600; organism=Citrus clementina; type=EST; length=604bp
TACCCTTTCTATGACAATTCTCAACAGCTTTCCCTCTATTTTTGTGCCTT
TAGTGGGCCTAGTATTTCCGGCAATGGCAATGGCTTCGTTATTTCTTTAT
CTTGAAAAAAATAAGATTTTGTAAATCCGATCGGATCAAGGTCAAATCTC
GTCTAGTTTTTTTCAAGACTTAGCGATGACGGATATCCATTTAGTAGAAT
AGTGTATAAGACTAAGAGGCGGCTTTCCCCGAACATAAACGAAGAGCTCT
TATGCATGTGTAAACATGTGTAAACATGATATATAGGTACATAAATTCTA
TCTATTTTGAACAAGAGGCTGTGATCCGAACTCATGTCTGCAATGAAAGT
CAATGGTACCAATCTACAGGGACTTATATGAAGGGGATACTCTTATTTTA
TTCTACCTCACCAATTCGATGAATTATTGCTAAGAGCTCACGTCCAAATA
GTACTAGTTGATGAGAGTTACTTCGGAAATACAAAAAGTAAACTAAAATG
GATTTTGTTTTGGTTATTTCCCCAATTCCAATAAAATGCAACTGGAGCTA
GTATGTATGAGTTGGCGATCAGAATATATATGGGTAGAATTTATAGCGGG
CTCT
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