CX287615
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287615 vs. ExPASy Swiss-Prot
Match: PSAG_ARATH (Photosystem I reaction center subunit V, chloroplastic OS=Arabidopsis thaliana GN=PSAG PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.649e-26 Identity = 60/101 (59.41%), Postives = 79/101 (78.22%), Query Frame = 3 Query: 120 ASSSLFTPSTITVRKHQISPSSISFQGLRPLNTR-AKTPLPKLATSAKRNSFGGIKAELNTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTH 419 ++S+L +P+T + +P+SISF GLRPL + + LPKL+T+ +++S ++AEL+ +VISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNG TH Sbjct: 4 SASALLSPTTFSTAISHKNPNSISFHGLRPLRLGGSSSALPKLSTTGRKSSSAVVRAELSPSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTH 104
BLAST of CX287615 vs. ExPASy Swiss-Prot
Match: PSAG_SPIOL (Photosystem I reaction center subunit V, chloroplastic OS=Spinacia oleracea GN=PSAG PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.639e-16 Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 3 Query: 189 SFQGLRPL--NTRAKTPLPKLATSAKRNSFGGIKAELNTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTH 419 SF GLRPL N + L+ S+ R S +AEL+ LVISLSTGLSLFLGRFVFFNFQREN+AKQ +PEQNG++H Sbjct: 36 SFSGLRPLKLNISSNNSSSSLSMSSARRSMT-CRAELSPSLVISLSTGLSLFLGRFVFFNFQRENMAKQ-VPEQNGMSH 112
BLAST of CX287615 vs. ExPASy Swiss-Prot
Match: PSAG_PEA (Photosystem I reaction center subunit V (Fragment) OS=Pisum sativum GN=PSAG PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.091e-13 Identity = 37/39 (94.87%), Postives = 37/39 (94.87%), Query Frame = 3 Query: 288 ELNTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQ 404 ELN LVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQ Sbjct: 1 ELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQ 39
BLAST of CX287615 vs. ExPASy Swiss-Prot
Match: PSAG_HORVU (Photosystem I reaction center subunit V, chloroplastic OS=Hordeum vulgare GN=PSAG PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.312e-12 Identity = 43/83 (51.81%), Postives = 56/83 (67.47%), Query Frame = 3 Query: 171 ISPSSISFQGLRPLNTRAKTPLPKLATSAKRNSFGGIKAELNTPLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTH 419 +SP +++ L P + RA ++ A+R+ +A L +VISLSTGLSL +GRFVFFNFQRENVAKQ +PEQNG TH Sbjct: 9 LSPPAVAGLRLAP-SPRAAASFRGVSPPARRSV--AARAALEPSVVISLSTGLSLVMGRFVFFNFQRENVAKQ-VPEQNGKTH 87 The following BLAST results are available for this feature:
BLAST of CX287615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287615 ID=CX287615; Name=CX287615; organism=Citrus clementina; type=EST; length=421bpback to top |