CX288539
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288539 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 348.591 bits (893), Expect = 1.467e-95 Identity = 167/201 (83.08%), Postives = 179/201 (89.05%), Query Frame = 1 Query: 4 RSKRVLTPAADATSNWLWQIAKAHVCSNDAGVHQLVNHWLRTHACIEPFILAAHRQLSAMHPIYKLLDPHMRYTLEINALARQNLINADGVIESCFTPGRYCMEMSAAAYK-NWRFDKEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYAADGLLIWSAIEDWVCTYVSHYYPNSSQICDDKELQSWYAESINTGHADLR 603 RSKRVLTP DATSNW+WQ+AKAHV SNDAGVHQLVNHWLRTHAC+EPFILAAHRQLSAMHPI+KLLDPHMRYTLEINALARQ+LI+ADGVIE FT G Y MEMSAAAYK +WRFD EGLPADLIRRGMA+PD TQPHGLKLLIEDYPYA DGLL+WSAI+ WV TYV YYPN + I D ELQSWY+ESIN GHADLR Sbjct: 541 RSKRVLTPPVDATSNWMWQLAKAHVSSNDAGVHQLVNHWLRTHACLEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINALARQSLISADGVIEGGFTAGAYGMEMSAAAYKSSWRFDMEGLPADLIRRGMAIPDATQPHGLKLLIEDYPYANDGLLLWSAIQTWVRTYVERYYPNPNLIKTDSELQSWYSESINVGHADLR 741
BLAST of CX288539 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 346.665 bits (888), Expect = 5.576e-95 Identity = 163/201 (81.09%), Postives = 181/201 (90.05%), Query Frame = 1 Query: 4 RSKRVLTPAADATSNWLWQIAKAHVCSNDAGVHQLVNHWLRTHACIEPFILAAHRQLSAMHPIYKLLDPHMRYTLEINALARQNLINADGVIESCFTPGRYCMEMSAAAYKN-WRFDKEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYAADGLLIWSAIEDWVCTYVSHYYPNSSQICDDKELQSWYAESINTGHADLR 603 +SKRV+TP DATSNW+WQ+AKAHV SNDAGVHQLVNHWLRTHAC+EPFILAAHRQLSAMHPI+KLLDPHMRYTLEINA+ARQ LI+ADGVIESCFT G+Y +E+S+AAYKN WRFD EGLPADLIRRGMAVPDPTQPHGLKLL+EDYPYA DGLL+WSAI+ WV TYV YY NS+ I D ELQ+WY+ESIN GHAD R Sbjct: 548 KSKRVVTPPVDATSNWMWQLAKAHVGSNDAGVHQLVNHWLRTHACLEPFILAAHRQLSAMHPIFKLLDPHMRYTLEINAVARQTLISADGVIESCFTAGQYGLEISSAAYKNKWRFDMEGLPADLIRRGMAVPDPTQPHGLKLLVEDYPYANDGLLLWSAIQTWVRTYVERYYANSNLIQTDTELQAWYSESINVGHADHR 748
BLAST of CX288539 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 332.028 bits (850), Expect = 1.421e-90 Identity = 155/201 (77.11%), Postives = 174/201 (86.57%), Query Frame = 1 Query: 4 RSKRVLTPAADATSNWLWQIAKAHVCSNDAGVHQLVNHWLRTHACIEPFILAAHRQLSAMHPIYKLLDPHMRYTLEINALARQNLINADGVIESCFTPGRYCMEMSAAAYKN-WRFDKEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYAADGLLIWSAIEDWVCTYVSHYYPNSSQICDDKELQSWYAESINTGHADLR 603 R+KRV TP ADATSNWLWQ+AKAHVCSNDAGVHQL+NHWLRTHAC+EPFI+AAHRQ+SAMHPI+KLL PHMRYTL+INALARQ LIN DGVIES FTPG CMEMSA AY+ WR D+EGLPADLIRRGMAV DP+QPHGL+LLIEDYPYAADGLL+WSAI W YV+ YYP+ + D ELQSWYAE++ +GHAD R Sbjct: 522 RAKRVFTPPADATSNWLWQLAKAHVCSNDAGVHQLINHWLRTHACMEPFIIAAHRQMSAMHPIFKLLKPHMRYTLKINALARQILINGDGVIESGFTPGNVCMEMSAFAYRELWRLDQEGLPADLIRRGMAVEDPSQPHGLRLLIEDYPYAADGLLLWSAISRWCEAYVAAYYPSDEAVQADYELQSWYAEAVQSGHADKR 722
BLAST of CX288539 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 316.62 bits (810), Expect = 6.180e-86 Identity = 151/202 (74.75%), Postives = 169/202 (83.66%), Query Frame = 1 Query: 4 RSKRVLTPAADATSNWLWQIAKAHVCSNDAGVHQLVNHWLRTHACIEPFILAAHRQLSAMHPIYKLLDPHMRYTLEINALARQNLINADGVIESCFTPGRYCMEMSAAAYKN-WRFDKEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYAADGLLIWSAIEDWVCTYVSHYYPNSSQICDDKELQSWYAESINTGHADLRH 606 R +VLTP DATSNWLW +AKAHV SNDAGVHQLVNHWLRTHA +EPFILAAHR +SAMHPI+KLL PHMRYTLEINALARQ+LINADGVIESCFTPG E+SAA Y+N WRFD EGLP+DLIRRG+AV D TQPHG++LLIEDYPYA DGLL+WSAI WV +YV YYP++ + D ELQ WY ESI+ GH DLRH Sbjct: 536 RPSKVLTPPYDATSNWLWMLAKAHVSSNDAGVHQLVNHWLRTHATMEPFILAAHRHMSAMHPIFKLLHPHMRYTLEINALARQSLINADGVIESCFTPGPVSGEISAAYYRNHWRFDLEGLPSDLIRRGVAVEDATQPHGVRLLIEDYPYANDGLLLWSAIRSWVESYVQLYYPDAGTVQCDLELQGWYHESIHVGHGDLRH 737
BLAST of CX288539 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 286.574 bits (732), Expect = 6.848e-77 Identity = 133/204 (65.20%), Postives = 165/204 (80.88%), Query Frame = 1 Query: 1 ARSKRVLTPAADATSNWLWQIAKAHVCSNDAGVHQLVNHWLRTHACIEPFILAAHRQLSAMHPIYKLLDPHMRYTLEINALARQNLINADGVIESCFTPGRYCMEMSAAAYKN-WRFDKEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYAADGLLIWSAIEDWVCTYVSHYYPNSSQICDDKELQSWYAESINTGHADLRHE 609 + +K V T DAT++W+W++AKAHVCSNDAGVHQLVNHWLRTHA +EP+I+A +RQLS MHP+YKLL PHMRYTLEINA AR++LIN G+IESCFTPG+Y ME+S+AAYK+ WRFD EGLPADL+RRGMA D + G++L+I+DYPYAADGLLIW AI+D V +YV H+Y +S I D ELQ+W+ E N GH D + E Sbjct: 537 SENKFVYTHGHDATTHWIWKLAKAHVCSNDAGVHQLVNHWLRTHASMEPYIIATNRQLSTMHPVYKLLHPHMRYTLEINARARKSLINGGGIIESCFTPGKYAMELSSAAYKSMWRFDMEGLPADLVRRGMAEEDSSAECGVRLVIDDYPYAADGLLIWKAIKDLVESYVKHFYSDSKSITSDLELQAWWDEIKNKGHYDKKDE 740
BLAST of CX288539 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 6.410e-75 Identity = 124/201 (61.69%), Postives = 157/201 (78.11%), Query Frame = 1 Query: 10 KRVLTPAADATSNWLWQIAKAHVCSNDAGVHQLVNHWLRTHACIEPFILAAHRQLSAMHPIYKLLDPHMRYTLEINALARQNLINADGVIESCFTPGRYCMEMSAAAY-KNWRFDKEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYAADGLLIWSAIEDWVCTYVSHYYPNSSQICDDKELQSWYAESINTGHADLRHE 609 K+V TP DATS WLW +AK H S+DAG HQL++HWLRTHAC EP+I+AA+RQLSAMHPIY+LL PH RYT+EINA ARQ+L+N G+IE+CF PG+Y +E+S+A Y K WRFD+EGLPADLI+RG+A D T HG++L I DYP+A DGL++W AI++WV YV HYYP+ I D+ELQ W++E N GH D + E Sbjct: 519 KQVFTPGYDATSCWLWNLAKTHAISHDAGYHQLISHWLRTHACTEPYIIAANRQLSAMHPIYRLLHPHFRYTMEINARARQSLVNGGGIIETCFWPGKYALELSSAVYGKLWRFDQEGLPADLIKRGLAEEDKTAEHGVRLTIPDYPFANDGLILWDAIKEWVTDYVKHYYPDEELITSDEELQGWWSEVRNIGHGDKKDE 719
BLAST of CX288539 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 8.108e-70 Identity = 123/203 (60.59%), Postives = 153/203 (75.37%), Query Frame = 1 Query: 10 KRVLTPAADA--TSNWLWQIAKAHVCSNDAGVHQLVNHWLRTHACIEPFILAAHRQLSAMHPIYKLLDPHMRYTLEINALARQNLINADGVIESCFTPGRYCMEMSAAAY-KNWRFDKEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYAADGLLIWSAIEDWVCTYVSHYYPNSSQICDDKELQSWYAESINTGHADLRHE 609 ++V TP D T +WLWQ+AKAH+ ++DAGVHQLV+HWLRTHAC EP+I+AA+RQLS MHP+Y+LL PH R+T+EINA AR LINA G+IE F PG Y +E+S+ AY + WRFD E LP DLIRRGMAV +P L+L IEDYPYA DGLL+W AI+ W TYV HYYP ++ I DD+ELQ+W+ E GHAD + E Sbjct: 550 RQVFTPGCDGSVTGSWLWQLAKAHILAHDAGVHQLVSHWLRTHACTEPYIIAANRQLSQMHPVYRLLHPHFRFTMEINAQARAMLINAGGIIEGSFVPGEYSLELSSVAYDQQWRFDMEALPEDLIRRGMAVRNPNGE--LELAIEDYPYANDGLLVWDAIKQWALTYVQHYYPCAADIVDDEELQAWWTEVRTKGHADKQDE 750
BLAST of CX288539 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 4.449e-68 Identity = 116/197 (58.88%), Postives = 151/197 (76.65%), Query Frame = 1 Query: 10 KRVLTPAADATSNWLWQIAKAHVCSNDAGVHQLVNHWLRTHACIEPFILAAHRQLSAMHPIYKLLDPHMRYTLEINALARQNLINADGVIESCFTPGRYCMEMSAAAY-KNWRFDKEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYAADGLLIWSAIEDWVCTYVSHYYPNSSQICDDKELQSWYAESINTGHAD 597 ++V TP+ D T +WLW++AKAHV ++DAG H+L+ HWLRTH +EP+I+AA+RQLS MHPIY+LL PH RYT+ INALAR LI+A G+IE F+P +Y ME+S+ AY K WRFD E LPADL+RRGMA DPT HGL+L IEDYP+A DGLLIW AI+ WV YV+ +YP++ + D+ELQ+++ E GH D Sbjct: 563 RQVFTPSTDTTKSWLWRMAKAHVRAHDAGHHELITHWLRTHCAVEPYIIAANRQLSEMHPIYQLLHPHFRYTMRINALARSRLISAAGIIELSFSPQKYSMELSSVAYDKLWRFDMEALPADLVRRGMAEEDPTAEHGLRLAIEDYPFANDGLLIWDAIKTWVQAYVARFYPDADSVAGDEELQAFWTEVRTKGHGD 759
BLAST of CX288539 vs. ExPASy Swiss-Prot
Match: LOXX_SOYBN (Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 5.811e-68 Identity = 113/198 (57.07%), Postives = 148/198 (74.75%), Query Frame = 1 Query: 16 VLTPAADATSNWLWQIAKAHVCSNDAGVHQLVNHWLRTHACIEPFILAAHRQLSAMHPIYKLLDPHMRYTLEINALARQNLINADGVIESCFTPGRYCMEMSAAAYKNWRFDKEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYAADGLLIWSAIEDWVCTYVSHYYPNSSQICDDKELQSWYAESINTGHADLRHE 609 V+ PA + + +W +AKAHV ND+G HQLV+HWL THA +EPF +A +R LS +HPIYKLL PH R T+ IN LARQ+LINADG+IE F PG+Y +EMS++ YKNW F + LPADL++RG+A+ DP+ PHGL+L+IEDYPYA DGL IW AI+ WV YVS YYP + + D ELQ+W+ E++ GH DL+ + Sbjct: 492 VVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLNTHAVMEPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKSFLPGKYSIEMSSSVYKNWVFTDQALPADLVKRGLAIEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVEKGHGDLKEK 689
BLAST of CX288539 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 256.914 bits (655), Expect = 5.811e-68 Identity = 117/197 (59.39%), Postives = 151/197 (76.65%), Query Frame = 1 Query: 10 KRVLTPAADATSNWLWQIAKAHVCSNDAGVHQLVNHWLRTHACIEPFILAAHRQLSAMHPIYKLLDPHMRYTLEINALARQNLINADGVIESCFTPGRYCMEMSAAAY-KNWRFDKEGLPADLIRRGMAVPDPTQPHGLKLLIEDYPYAADGLLIWSAIEDWVCTYVSHYYPNSSQICDDKELQSWYAESINTGHAD 597 ++V TP+ DAT +WLW++AKAHV ++DAG H+L+ HWLRTH +EP+I+AA+RQLS MHPIY+LL PH RYT+ INA AR LI+A G+IE F+P +Y ME+S+ AY K WRFD E LPADL+RRGMA DPT HGLKL IEDYP+A DGLLIW AI+ WV YV+ +YP++ + D+ELQ+++ E GH D Sbjct: 546 RQVFTPSTDATMSWLWRMAKAHVRAHDAGHHELITHWLRTHCAVEPYIIAANRQLSEMHPIYQLLRPHFRYTMRINARARSALISAGGIIERSFSPQKYSMELSSVAYDKLWRFDTEALPADLVRRGMAEEDPTAEHGLKLAIEDYPFANDGLLIWDAIKTWVQAYVARFYPDADSVAGDEELQAFWTEVRTKGHGD 742 The following BLAST results are available for this feature:
BLAST of CX288539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288539 ID=CX288539; Name=CX288539; organism=Citrus clementina; type=EST; length=611bpback to top |