CX288562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: ARAE1_ARATH (UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1 SV=1) HSP 1 Score: 359.377 bits (921), Expect = 7.952e-99 Identity = 175/199 (87.94%), Postives = 185/199 (92.96%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 597 NITSNTLVVLE+MA HGV TLIYSSTCATYGEP+ MPITEETPQ PINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGI+ GL++KGTDY TADGTCVRDYIDV DLVDAHVKAL++A+P+KVGIYNVGTGKG SVKEFVEACKKAT IK+ Y PRR GDYA Sbjct: 171 NITSNTLVVLETMAAHGVKTLIYSSTCATYGEPDIMPITEETPQVPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQIKGTDYKTADGTCVRDYIDVTDLVDAHVKALQKAKPRKVGIYNVGTGKGSSVKEFVEACKKATGVEIKIDYLPRRAGDYA 369
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: ARAE4_ARATH (Putative UDP-arabinose 4-epimerase 4 OS=Arabidopsis thaliana GN=At5g44480 PE=3 SV=1) HSP 1 Score: 355.14 bits (910), Expect = 1.500e-97 Identity = 174/199 (87.44%), Postives = 183/199 (91.96%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 597 NITSNTL VLE+MARH V LIYSSTCATYGEPEKMPITE+TPQ PINPYGKAKKMAED+ILDFSKNSDMAVMILRYFNVIGSDP GRLGEAPRPELRE GRISGACFDAARG I GL+VKGTDY T+DGTC+RDYIDV DLVDAHVKALE+AQP+KVGIYNVGTGKGRSVKEFVEACKKAT IKV + PRRPGDYA Sbjct: 195 NITSNTLGVLEAMARHKVKKLIYSSTCATYGEPEKMPITEDTPQVPINPYGKAKKMAEDMILDFSKNSDMAVMILRYFNVIGSDPGGRLGEAPRPELREQGRISGACFDAARGFIPGLQVKGTDYKTSDGTCIRDYIDVTDLVDAHVKALEKAQPRKVGIYNVGTGKGRSVKEFVEACKKATGVEIKVDFLPRRPGDYA 393
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: ARAE2_ARATH (Putative UDP-arabinose 4-epimerase 2 OS=Arabidopsis thaliana GN=At2g34850 PE=2 SV=3) HSP 1 Score: 354.755 bits (909), Expect = 1.959e-97 Identity = 175/199 (87.94%), Postives = 183/199 (91.96%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 597 NITSNTLVVLE+MA HGV TLIYSSTCATYGEPEKMPITEETPQ PINPYGKAKKMAEDIILDFSKNS MAVMILRYFNVIGSDPEGRLGEAPRPEL EHGRISGACFDAARGII GL++KGTDY T DGTCVRDYIDV DLVDAHVKALE+A+P+KVGI+NVGTGKG SVKEFVEACKKAT +IKV Y RR GDYA Sbjct: 170 NITSNTLVVLETMAAHGVKTLIYSSTCATYGEPEKMPITEETPQVPINPYGKAKKMAEDIILDFSKNSIMAVMILRYFNVIGSDPEGRLGEAPRPELSEHGRISGACFDAARGIIPGLQIKGTDYKTVDGTCVRDYIDVTDLVDAHVKALEKAKPRKVGIFNVGTGKGSSVKEFVEACKKATGVDIKVDYLERRAGDYA 368
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: ARAE3_ARATH (Probable UDP-arabinose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g20460 PE=2 SV=2) HSP 1 Score: 354.369 bits (908), Expect = 2.558e-97 Identity = 172/199 (86.43%), Postives = 184/199 (92.46%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 597 NITSNTLVVLE++ARH V LIYSSTCATYGEP+KMPI E TPQ PINPYGKAKKMAED+ILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAP+PELREHGRISGACFDAARG+I GL+VKGTDY T DGTCVRDYIDV DLVDAHVKALE+A+P+ VGIYNVGTGKGRSVKEFVEACKKAT +IKV + PRRPGDYA Sbjct: 170 NITSNTLVVLEAVARHKVKKLIYSSTCATYGEPDKMPIVEVTPQVPINPYGKAKKMAEDMILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPKPELREHGRISGACFDAARGVIPGLQVKGTDYKTGDGTCVRDYIDVTDLVDAHVKALEKAKPRNVGIYNVGTGKGRSVKEFVEACKKATGVDIKVDFLPRRPGDYA 368
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: ARAE1_ORYSJ (Probable UDP-arabinose 4-epimerase 1 OS=Oryza sativa subsp. japonica GN=UEL-1 PE=2 SV=2) HSP 1 Score: 347.436 bits (890), Expect = 3.127e-95 Identity = 175/201 (87.06%), Postives = 182/201 (90.55%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN--SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 597 NITSNTLVVLE+MA H V TLIYSSTCATYGEPEKMPITE TPQ PINPYGKAKKMAEDIILDFSK+ +DMAVMILRYFNVIGSDPEGRLGEAP+PELREHGRISGACFDAA GII GLKVKGTDY T DGTCVRDYIDV DLVDAHVKAL +A+ KVGIYNVGTGKGRSVKEFVEACKKAT +IKV Y PRRPGDYA Sbjct: 173 NITSNTLVVLEAMAAHNVRTLIYSSTCATYGEPEKMPITEGTPQFPINPYGKAKKMAEDIILDFSKSKKADMAVMILRYFNVIGSDPEGRLGEAPKPELREHGRISGACFDAALGIIPGLKVKGTDYETPDGTCVRDYIDVTDLVDAHVKALNKAERGKVGIYNVGTGKGRSVKEFVEACKKATGVDIKVDYFPRRPGDYA 373
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: ARAE3_ORYSJ (Probable UDP-arabinose 4-epimerase 3 OS=Oryza sativa subsp. japonica GN=UEL-3 PE=2 SV=1) HSP 1 Score: 343.584 bits (880), Expect = 4.515e-94 Identity = 169/200 (84.50%), Postives = 179/200 (89.50%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKN-SDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 597 NITSNTL++LE+MA HGV TLIYSSTCATYGEPEKMPI E T Q PINPYGKAKKMAEDIILDF+K DMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAA GII GLKVKGTDY T DGTC+RDYIDV DLVDAHVKAL +A+P KVGIYNVGTG+GRSVKEFV+ACKKAT NIK+ Y RRPGDYA Sbjct: 164 NITSNTLLILEAMASHGVKTLIYSSTCATYGEPEKMPIVETTRQLPINPYGKAKKMAEDIILDFTKGRKDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVKGTDYPTTDGTCIRDYIDVTDLVDAHVKALNKAEPSKVGIYNVGTGRGRSVKEFVDACKKATGVNIKIEYLSRRPGDYA 363
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: ARAE2_ORYSJ (Probable UDP-arabinose 4-epimerase 2 OS=Oryza sativa subsp. japonica GN=UEL-2 PE=2 SV=1) HSP 1 Score: 342.043 bits (876), Expect = 1.314e-93 Identity = 169/199 (84.92%), Postives = 179/199 (89.95%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKKVGIYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGDYA 597 NITSNTL VLE+MA + V TLIYSSTCATYGEP+ MPITE TPQ PINPYGKAKKMAEDIILDFSK S+MAVMILRYFNVIGSDP GRLGEAPRPELREHGRISGACFDAA GII GLKV+GTDY TADGTC+RDYIDV DLVDAHVKAL++AQP KVGIYNVGTG GRSVKEFVEACK AT A+IKV + RRPGDYA Sbjct: 150 NITSNTLTVLEAMAAYNVKTLIYSSTCATYGEPDTMPITEATPQNPINPYGKAKKMAEDIILDFSKRSEMAVMILRYFNVIGSDPGGRLGEAPRPELREHGRISGACFDAALGIIPGLKVRGTDYPTADGTCIRDYIDVTDLVDAHVKALDKAQPGKVGIYNVGTGHGRSVKEFVEACKSATGASIKVSFLTRRPGDYA 348
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: EXOB_RHIME (UDP-glucose 4-epimerase OS=Rhizobium meliloti GN=exoB PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 7.080e-39 Identity = 87/198 (43.94%), Postives = 113/198 (57.07%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKKVGI-YNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGD 591 N TL +L + G+D ++SSTCATYG P+ +P+ E QAPINPYG+ K + E + D+ + +ILRYFN G+D EGR+GE PE DAA G G KV GTDY T DGTCVRDYI V DL DAHV+A++ + N+GTG G +VKE ++A +K + Y RR GD Sbjct: 94 NNVIGTLTLLSAALAAGIDAFVFSSTCATYGLPDSVPMDESHKQAPINPYGRTKWICEQALKDYGLYKGLRSVILRYFNAAGADFEGRIGEWHEPET----HAIPLAIDAALGRREGFKVFGTDYDTRDGTCVRDYIHVLDLADAHVRAVDYLLEGGESVALNLGTGTGTTVKELLDAIEKVAKRPFNIGYAERREGD 287
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: EXOB_RHILT (UDP-glucose 4-epimerase OS=Rhizobium leguminosarum bv. trifolii GN=exoB PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.975e-37 Identity = 84/198 (42.42%), Postives = 115/198 (58.08%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKKVGI-YNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGD 591 N TL +L + G++ ++SSTCATYG P+ +P+ E Q PINPYG+ K + E + D+ + + ++LRYFN G+D EGR+GE +PE DAA G G KV G+DY T DGTCVRDYI V DL DAHV+A+E + N+GTG G +VKE + A ++ ++ V Y RR GD Sbjct: 94 NNVIGTLTLLSAAQAAGINAFVFSSTCATYGLPQSVPLDETHRQVPINPYGRTKYIVEQALADYDQYGSLRSVVLRYFNAAGADFEGRIGEWHQPET----HAIPLAIDAALGRRQGFKVFGSDYETRDGTCVRDYIHVLDLADAHVRAVEYLLKGGDSVALNLGTGTGTTVKELLGAIEEVSNRPFPVEYIGRREGD 287
BLAST of CX288562 vs. ExPASy Swiss-Prot
Match: EXOB_AZOBR (UDP-glucose 4-epimerase OS=Azospirillum brasilense GN=exoB PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.074e-37 Identity = 87/200 (43.50%), Postives = 118/200 (59.00%), Query Frame = 1 Query: 1 NITSNTLVVLESMARHGVDTLIYSSTCATYGEPEKMPITEETPQAPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVKGTDYSTADGTCVRDYIDVNDLVDAHVKALERAQPKKVG---IYNVGTGKGRSVKEFVEACKKATSANIKVIYEPRRPGD 591 N T+N+L +L + R G+D +++SST A YG PE +PI E+ P PINPYG +K M E ++ D + +ILRYFNV G+DP GR G+A + H I AC A G L + GTDY T DGTC+RDYI V+DL DAHV AL ++ G + N G G+G SV+E V ++ + + + RRPGD Sbjct: 100 NNTANSLTLLGACLRAGIDKVVFSSTAAVYGAPESVPIREDAPTVPINPYGASKLMTEQMLRDAGAAHGLRSVILRYFNVAGADPAGRTGQA--TPVATH-LIKVAC-QALLGRRPPLAIFGTDYDTPDGTCIRDYIHVSDLADAHVLAL--LHLRRGGGSLLMNCGYGRGASVREVVRTLEEVSGEQVPATFADRRPGD 293 The following BLAST results are available for this feature:
BLAST of CX288562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288562 ID=CX288562; Name=CX288562; organism=Citrus clementina; type=EST; length=597bpback to top |