CX288567
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288567 vs. ExPASy Swiss-Prot
Match: COX12_SCHPO (Cytochrome c oxidase subunit 6B OS=Schizosaccharomyces pombe GN=cox12 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 6.809e-21 Identity = 42/81 (51.85%), Postives = 54/81 (66.67%), Query Frame = 2 Query: 362 DQEASEETPEIKLETAPADFRFPTTNQTRHCFTRYIEYHRCVAAKGEGAPECDKFAKYYRALCPSDWIEKWNEQRENGTFP 604 +QE E + T D RFP TNQT+HCF YI+Y RC+ AKGE C +F Y++LCP +W+E+W+EQRENGTFP Sbjct: 3 EQEDQEAPKQFTFGTVGFDARFPNTNQTKHCFQSYIDYFRCIKAKGEDFVPCKQFWHAYQSLCPMEWVERWDEQRENGTFP 83
BLAST of CX288567 vs. ExPASy Swiss-Prot
Match: COX12_YEAST (Cytochrome c oxidase subunit 6B OS=Saccharomyces cerevisiae GN=COX12 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.202e-17 Identity = 38/68 (55.88%), Postives = 45/68 (66.18%), Query Frame = 2 Query: 398 LETAPADFRFPTTNQTRHCFTRYIEYHRCVAAKGEGAPECDKFAKYYRALCPSDWIEKWNEQRENGTF 601 L T D RFP NQT+HC+ Y++YH+CV KGE C F K Y ALCP DWIEKW++QRE G F Sbjct: 9 LHTVGFDARFPQQNQTKHCWQSYVDYHKCVNMKGEDFAPCKVFWKTYNALCPLDWIEKWDDQREKGIF 76
BLAST of CX288567 vs. ExPASy Swiss-Prot
Match: CX6B1_PONAB (Cytochrome c oxidase subunit 6B1 OS=Pongo abelii GN=COX6B1 PE=3 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 1.469e-15 Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 2 Query: 380 ETPEIKLETAPADFRFPTTNQTRHCFTRYIEYHRC---VAAKGEGAPECDKFAKYYRALCPSDWIEKWNEQRENGTFP 604 ET +TAP D RFP NQTR+C+ Y+++HRC + AKG C+ + + Y++LCP+ W+ W+EQR GTFP Sbjct: 6 ETKLKNYKTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFP 83
BLAST of CX288567 vs. ExPASy Swiss-Prot
Match: CX6B1_MACMU (Cytochrome c oxidase subunit 6B1 OS=Macaca mulatta GN=COX6B1 PE=3 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 1.469e-15 Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 2 Query: 374 SEETPEIKLE---TAPADFRFPTTNQTRHCFTRYIEYHRCVAA---KGEGAPECDKFAKYYRALCPSDWIEKWNEQRENGTFP 604 +EE E K++ TAP D RFP NQTR+C+ Y+++HRC A KG C+ + + Y++LCP+ W+ W+EQR GTFP Sbjct: 2 AEEDIETKIKNYKTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTTKGGNVSVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFP 84
BLAST of CX288567 vs. ExPASy Swiss-Prot
Match: CX6B1_MACFA (Cytochrome c oxidase subunit 6B1 OS=Macaca fascicularis GN=COX6B1 PE=3 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 1.469e-15 Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 2 Query: 374 SEETPEIKLE---TAPADFRFPTTNQTRHCFTRYIEYHRCVAA---KGEGAPECDKFAKYYRALCPSDWIEKWNEQRENGTFP 604 +EE E K++ TAP D RFP NQTR+C+ Y+++HRC A KG C+ + + Y++LCP+ W+ W+EQR GTFP Sbjct: 2 AEEDIETKIKNYKTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTTKGGNVSVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFP 84
BLAST of CX288567 vs. ExPASy Swiss-Prot
Match: CX6B1_HUMAN (Cytochrome c oxidase subunit 6B1 OS=Homo sapiens GN=COX6B1 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.469e-15 Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 2 Query: 380 ETPEIKLETAPADFRFPTTNQTRHCFTRYIEYHRC---VAAKGEGAPECDKFAKYYRALCPSDWIEKWNEQRENGTFP 604 ET +TAP D RFP NQTR+C+ Y+++HRC + AKG C+ + + Y++LCP+ W+ W+EQR GTFP Sbjct: 6 ETKIKNYKTAPFDSRFPNQNQTRNCWQNYLDFHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFP 83
BLAST of CX288567 vs. ExPASy Swiss-Prot
Match: CX6B2_RAT (Cytochrome c oxidase subunit 6B2 OS=Rattus norvegicus GN=Cox6b2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.292e-15 Identity = 31/70 (44.29%), Postives = 46/70 (65.71%), Query Frame = 2 Query: 404 TAPADFRFPTTNQTRHCFTRYIEYHRCVAA---KGEGAPECDKFAKYYRALCPSDWIEKWNEQRENGTFP 604 T P D RFP NQTR+C+ +++YHRCV +G+ CD + + + +LCP W+++WNEQ + GTFP Sbjct: 16 TPPFDPRFPNQNQTRNCYQNFLDYHRCVKTMDRRGKNTQACDYYFRVFHSLCPVSWVQRWNEQIKQGTFP 85
BLAST of CX288567 vs. ExPASy Swiss-Prot
Match: CX6B2_HUMAN (Cytochrome c oxidase subunit 6B2 OS=Homo sapiens GN=COX6B2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.292e-15 Identity = 32/79 (40.51%), Postives = 50/79 (63.29%), Query Frame = 2 Query: 374 SEETPEIKLETAPADFRFPTTNQTRHCFTRYIEYHRCV---AAKGEGAPECDKFAKYYRALCPSDWIEKWNEQRENGTF 601 ++E P+ K T P D RFP+ NQ R+C+ +++YHRC+ +G+ C+ + + Y +LCP W+E WNEQ +NG F Sbjct: 6 AQEPPKGKWSTPPFDPRFPSQNQIRNCYQNFLDYHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIF 84
BLAST of CX288567 vs. ExPASy Swiss-Prot
Match: CX6B2_MOUSE (Cytochrome c oxidase subunit 6B2 OS=Mus musculus GN=Cox6b2 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.523e-15 Identity = 31/80 (38.75%), Postives = 51/80 (63.75%), Query Frame = 2 Query: 374 SEETPEIKLETAPADFRFPTTNQTRHCFTRYIEYHRCVAA---KGEGAPECDKFAKYYRALCPSDWIEKWNEQRENGTFP 604 +++ P + T P D RFP NQTR+C+ +++YHRCV +G+ C+ + + + +LCP W+++WNEQ + GTFP Sbjct: 6 AQKPPPGQWTTPPFDPRFPNQNQTRNCYQNFLDYHRCVKTMNRRGKSTQPCEYYFRVFHSLCPISWVQRWNEQIKQGTFP 85
BLAST of CX288567 vs. ExPASy Swiss-Prot
Match: CX6B1_BOVIN (Cytochrome c oxidase subunit 6B1 OS=Bos taurus GN=COX6B1 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.244e-14 Identity = 31/71 (43.66%), Postives = 47/71 (66.20%), Query Frame = 2 Query: 401 ETAPADFRFPTTNQTRHCFTRYIEYHRC---VAAKGEGAPECDKFAKYYRALCPSDWIEKWNEQRENGTFP 604 +TAP D RFP NQTR+C+ Y+++HRC + AKG C+ + + Y++LCP W+ W+++R GTFP Sbjct: 13 QTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRVYKSLCPISWVSTWDDRRAEGTFP 83 The following BLAST results are available for this feature:
BLAST of CX288567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288567 ID=CX288567; Name=CX288567; organism=Citrus clementina; type=EST; length=605bpback to top |