CX288571
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288571 vs. ExPASy Swiss-Prot
Match: UPL7_ARATH (E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis thaliana GN=UPL7 PE=2 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 4.116e-80 Identity = 138/161 (85.71%), Postives = 154/161 (95.65%), Query Frame = 1 Query: 1 PFSNAFYRGLTDLISPSWLKLFNASEFNQLLSGGRHDIDVDDLRKNTRYTGGYSEGSRTIKLFWEVVEGFEPKERCMLLKFVTSCSRAPLLGFKHLQPSFTIHKVACDSSLWAVIGGQDVERLPSASTCYNTLKLPTYKRSSTLKAKLLYAISSNAGFELS 483 PFSNAFYRGLTDLISP+WLKLFNA EFNQLLSGG HDIDVDDLR+NT+YTGGYS+ SRTIK+FWEV++GFEP ERC+LLKFVTSCSRAPLLGFK+LQP+F IHKV+CD+SLWA IGGQDVERLPSASTCYNTLKLPTYKR+ST++ KLLYAI+SNAGFELS Sbjct: 982 PFSNAFYRGLTDLISPAWLKLFNAHEFNQLLSGGNHDIDVDDLRRNTKYTGGYSDSSRTIKIFWEVMKGFEPSERCLLLKFVTSCSRAPLLGFKYLQPTFIIHKVSCDTSLWAAIGGQDVERLPSASTCYNTLKLPTYKRASTMREKLLYAITSNAGFELS 1142
BLAST of CX288571 vs. ExPASy Swiss-Prot
Match: UBE3C_MOUSE (Ubiquitin-protein ligase E3C OS=Mus musculus GN=Ube3c PE=2 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 1.339e-38 Identity = 81/161 (50.31%), Postives = 105/161 (65.22%), Query Frame = 1 Query: 1 PFSNAFYRGLTDLISPSWLKLFNASEFNQLLSGGRHDIDVDDLRKNTRYTGGYSEGSRTIKLFWEVVEGFEPKERCMLLKFVTSCSRAPLLGFKHLQPSFTIHKVACDSSLWAVIGGQDVERLPSASTCYNTLKLPTYKRSSTLKAKLLYAISSNAGFELS 483 P AF +GL +++S WL++F+ E L+SG + + ++DL+ T Y+GGYS IK+FW VVEGF +E+ LLKFVTSCSR PLLGFK L P+F IH GG D+ERLP+ASTC N LKLP + + L++KLLYAI AGFELS Sbjct: 934 PHCLAFRQGLANVVSLEWLRMFDQQEIQVLISGAQVPVSLEDLKSFTNYSGGYSADHPVIKIFWRVVEGFTDEEKRKLLKFVTSCSRPPLLGFKELYPAFCIHN-----------GGSDLERLPTASTCMNLLKLPEFYDEALLRSKLLYAIECAAGFELS 1083
BLAST of CX288571 vs. ExPASy Swiss-Prot
Match: UBE3C_HUMAN (Ubiquitin-protein ligase E3C OS=Homo sapiens GN=UBE3C PE=1 SV=3) HSP 1 Score: 158.688 bits (400), Expect = 2.285e-38 Identity = 81/157 (51.59%), Postives = 104/157 (66.24%), Query Frame = 1 Query: 13 AFYRGLTDLISPSWLKLFNASEFNQLLSGGRHDIDVDDLRKNTRYTGGYSEGSRTIKLFWEVVEGFEPKERCMLLKFVTSCSRAPLLGFKHLQPSFTIHKVACDSSLWAVIGGQDVERLPSASTCYNTLKLPTYKRSSTLKAKLLYAISSNAGFELS 483 AF +GL +++S WL++F+ E L+SG + I ++DL+ T Y+GGYS IK+FW VVEGF +E+ LLKFVTSCSR PLLGFK L P+F IH GG D+ERLP+ASTC N LKLP + + L++KLLYAI AGFELS Sbjct: 938 AFRQGLANVVSLEWLRMFDQQEIQVLISGAQVPISLEDLKSFTNYSGGYSADHPVIKVFWRVVEGFTDEEKRKLLKFVTSCSRPPLLGFKELYPAFCIHN-----------GGSDLERLPTASTCMNLLKLPEFYDETLLRSKLLYAIECAAGFELS 1083
BLAST of CX288571 vs. ExPASy Swiss-Prot
Match: UPL6_ARATH (E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana GN=UPL6 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.526e-37 Identity = 75/159 (47.17%), Postives = 101/159 (63.52%), Query Frame = 1 Query: 7 SNAFYRGLTDLISPSWLKLFNASEFNQLLSGGRHDIDVDDLRKNTRYTGGYSEGSRTIKLFWEVVEGFEPKERCMLLKFVTSCSRAPLLGFKHLQPSFTIHKVACDSSLWAVIGGQDVERLPSASTCYNTLKLPTYKRSSTLKAKLLYAISSNAGFELS 483 S+ F RG LI W+ +FN E L+SG +D+DDLR NT Y GGY G I +FWEV++ F + + LKFVT CSR PLLGFK+L+P+F I + A +S + V+RLP+++TC N LKLP Y+ L+ KL+YAIS+ AGF+LS Sbjct: 877 SSHFLRGFQQLIPKEWIDMFNEHELQVLISGSVDSLDIDDLRNNTNYAGGYHAGHYVIDMFWEVMKSFSTENQKKFLKFVTGCSRGPLLGFKYLEPAFCIQRAAGSAS------NESVDRLPTSATCMNLLKLPPYQSKELLETKLMYAISAEAGFDLS 1029
BLAST of CX288571 vs. ExPASy Swiss-Prot
Match: YFK7_SCHPO (Probable E3 ubiquitin protein ligase C167.07c OS=Schizosaccharomyces pombe GN=SPAC167.07c PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 7.605e-34 Identity = 75/157 (47.77%), Postives = 94/157 (59.87%), Query Frame = 1 Query: 13 AFYRGLTDLISPSWLKLFNASEFNQLLSGGRHDIDVDDLRKNTRYTGGYSEGSRTIKLFWEVVEGFEPKERCMLLKFVTSCSRAPLLGFKHLQPSFTIHKVACDSSLWAVIGGQDVERLPSASTCYNTLKLPTYKRSSTLKAKLLYAISSNAGFELS 483 AF G T +I P WL +F+ SE L+ G ID+DDLR++T Y GGY S TI LFWEV+ FE +++ +KFVTS +R P+LGFK L PSF I + G+D RLP+ASTC N LKLP Y TL+ KLL A+ S GF S Sbjct: 884 AFTNGFTQIIDPHWLAMFHESEIQILVGGDPVPIDIDDLRRHTVYAGGYEPNSPTIVLFWEVLREFEEEDKRSFVKFVTSVARPPILGFKALMPSFCIR-----------VNGEDETRLPTASTCVNLLKLPMYSTKQTLRDKLLTAVRSGVGFGFS 1029
BLAST of CX288571 vs. ExPASy Swiss-Prot
Match: HUL5_YEAST (Probable E3 ubiquitin-protein ligase HUL5 OS=Saccharomyces cerevisiae GN=HUL5 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.297e-33 Identity = 76/158 (48.10%), Postives = 102/158 (64.56%), Query Frame = 1 Query: 10 NAFYRGLTDLISPSWLKLFNASEFNQLLSGGRHDIDVDDLRKNTRYTGGYSEGSRTIKLFWEVVEGFEPKERCMLLKFVTSCSRAPLLGFKHLQPSFTIHKVACDSSLWAVIGGQDVERLPSASTCYNTLKLPTYKRSSTLKAKLLYAISSNAGFELS 483 +AF+ GL+ +I+P W+++FN+ E L+SG R +ID+DDL+ NT Y GGY E +TI FWEV+ F+ +E+ LKFVTS +APL GFK L P F I G + RLP+ASTC N LKLP Y+ + L+ KLLYAI+S A F+LS Sbjct: 765 SAFHGGLSVIIAPHWMEMFNSIELQMLISGERDNIDLDDLKSNTEY-GGYKEEDQTIVDFWEVLNEFKFEEKLNFLKFVTSVPQAPLQGFKALDPKFGIRN-----------AGTEKYRLPTASTCVNLLKLPDYRNKTILREKLLYAINSGARFDLS 910
BLAST of CX288571 vs. ExPASy Swiss-Prot
Match: UBE3B_MOUSE (Ubiquitin-protein ligase E3B OS=Mus musculus GN=Ube3b PE=2 SV=3) HSP 1 Score: 141.739 bits (356), Expect = 2.890e-33 Identity = 75/171 (43.86%), Postives = 104/171 (60.82%), Query Frame = 1 Query: 13 AFYRGLTDLISPSWLKLFNASEFNQLLSGGRHDIDVDDLRKNTRYTGGYSEGSRTIKLFWEVVEG-FEPKERCMLLKFVTSCSRAPLLGFKHLQPSFTIHKVACDS------SLWAVIGG-------QDVERLPSASTCYNTLKLPTYKRSSTLKAKLLYAISSNAGFELS 483 A G +I P W+++F+ E +L+SG +ID++DL+K+T Y GG+ R I W+++ F P+ER M LKFVTSCSR PLLGF +L+P F+I V +L +V+ G + RLP++STC+N LKLP Y + S L+ KL YAIS N GFELS Sbjct: 900 ALISGFRSIIKPEWIRMFSTPELQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVIIWLWDILASDFTPEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRKREPGGRLPTSSTCFNLLKLPNYSKKSVLREKLRYAISMNTGFELS 1070
BLAST of CX288571 vs. ExPASy Swiss-Prot
Match: UBE3B_XENTR (Ubiquitin-protein ligase E3B OS=Xenopus tropicalis GN=ube3b PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.930e-33 Identity = 75/171 (43.86%), Postives = 104/171 (60.82%), Query Frame = 1 Query: 13 AFYRGLTDLISPSWLKLFNASEFNQLLSGGRHDIDVDDLRKNTRYTGGYSEGSRTIKLFWEVV-EGFEPKERCMLLKFVTSCSRAPLLGFKHLQPSFTIHKVACD------SSLWAVIGG-------QDVERLPSASTCYNTLKLPTYKRSSTLKAKLLYAISSNAGFELS 483 AF G +I P W+++F+A E +L+SG +ID+DDL+K+T Y GG+ R I W+++ F +E+ M LKFVTSCSR PLLGF +L+P F+I V +L +V+ G + RLP++STC+N LKLP Y + L+ KL YAIS N GFELS Sbjct: 902 AFISGFRSIIRPEWIRMFSAPELQRLISGDNAEIDLDDLKKHTVYYGGFHGSHRVIIWLWDILANDFSSEEKAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRKKEPGGRLPTSSTCFNLLKLPNYSKKGILREKLRYAISMNTGFELS 1072
BLAST of CX288571 vs. ExPASy Swiss-Prot
Match: UBE3B_HUMAN (Ubiquitin-protein ligase E3B OS=Homo sapiens GN=UBE3B PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 4.930e-33 Identity = 75/171 (43.86%), Postives = 103/171 (60.23%), Query Frame = 1 Query: 13 AFYRGLTDLISPSWLKLFNASEFNQLLSGGRHDIDVDDLRKNTRYTGGYSEGSRTIKLFWEVVEG-FEPKERCMLLKFVTSCSRAPLLGFKHLQPSFTIHKVACDS------SLWAVIGG-------QDVERLPSASTCYNTLKLPTYKRSSTLKAKLLYAISSNAGFELS 483 A G +I P W+++F+ E +L+SG +ID++DL+K+T Y GG+ R I W+++ F P ER M LKFVTSCSR PLLGF +L+P F+I V +L +V+ G + RLP++STC+N LKLP Y + S L+ KL YAIS N GFELS Sbjct: 898 ALISGFRSIIKPEWIRMFSTPELQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVIIWLWDILASDFTPDERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRKREPGGRLPTSSTCFNLLKLPNYSKKSVLREKLRYAISMNTGFELS 1068
BLAST of CX288571 vs. ExPASy Swiss-Prot
Match: UPL2_ARATH (E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana GN=UPL2 PE=1 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 2.295e-22 Identity = 68/164 (41.46%), Postives = 87/164 (53.05%), Query Frame = 1 Query: 1 PFSNAFYRGLTDLISPSWLKLFNASEFNQLLSGGRHDIDVDDLRKNTRYTGGYSEGSRTIKLFWEVVEGFEPKERCMLLKFVTSCSRAPLLGFKHLQ-----PSFTIHKVACDSSLWAVIGGQDVERLPSASTCYNTLKLPTYKRSSTLKAKLLYAI-SSNAGF 474 P NAF GL +LI + +FN E L+SG +ID DDL+ NT YT Y+ GS I+ FWEVV+ F ++ L+FVT S+ PL GFK LQ IHK ERLPSA TC+N L LP Y+ ++ +LL AI +N GF Sbjct: 3505 PQINAFLEGLNELIPRELVSIFNDKELELLISG-LPEIDFDDLKANTEYTS-YTVGSPVIRWFWEVVKAFSKEDMARFLQFVTGTSKVPLEGFKALQGISGPQRLQIHKAY-----------GSPERLPSAHTCFNQLDLPEYQSKEQVQERLLLAIHEANEGF 3655 The following BLAST results are available for this feature:
BLAST of CX288571 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288571 ID=CX288571; Name=CX288571; organism=Citrus clementina; type=EST; length=630bpback to top |