CX288573

Overview
NameCX288573
Unique NameCX288573
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length490
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 5.150e-19
Identity = 55/147 (37.41%), Postives = 79/147 (53.74%), Query Frame = 2
Query:   47 YLGLLVSILLIVYQHIRRNKIQPKNXXXXXXXXXXXGHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLT-KNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEI 484
            Y  LL  + L++      +K Q  N           GH HL+K P+ + L    N+YGPI  L+ GSR  +V++S S  +E  T +NDI+ ++RPL  +         T   APYG+HWRNLRR+ + EI S  RL+   +IR +EI
Sbjct:    3 YFILLPLLFLVISYKFLYSKTQRFNLPPGPPSRPFVGHLHLMKPPIHRLLQRYSNQYGPIFSLRFGSRRVVVITSPSLAQESFTGQNDIVLSSRPLQLTAKYVAYNHTTVGTAPYGDHWRNLRRICSQEILSSHRLINFQHIRKDEI 149          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 5.150e-19
Identity = 57/151 (37.75%), Postives = 81/151 (53.64%), Query Frame = 2
Query:   32 MDALHYLGLLVSILLIVYQHIRRNKIQPKNXXXXXXXXXXXGHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGA-PYGEHWRNLRRVYALEIFSPRRLLLSANIRTEE 481
            +  L Y    +++  I    IR  K   KN           G+ H LK P+ +T   L  KYG +  L  GSR  +VVSS S  ++C TKND++ ANRP   S G+     +T++G+  YGEHWRNLRR+ AL++ S  R+   + IR +E
Sbjct:    4 LSLLSYSVFYLALFFIFNIVIRARKF--KNLPPGPPSLPIIGNLHHLKRPLHRTFKGLSEKYGHVFSLWFGSRLVVVVSSASEFQQCFTKNDVVLANRPRFLS-GKYIFYNYTTLGSTSYGEHWRNLRRITALDVLSNHRINSFSGIRRDE 151          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.556e-18
Identity = 48/111 (43.24%), Postives = 72/111 (64.86%), Query Frame = 2
Query:  155 GHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIG-APYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEI 484
            G+FH ++LP+ +TL NL  KYGPIL L+ GS PT+VVSS    +  L  +D+IFA+RP   S G+     F  I  +PYG+HWR +R++  LE+ + +R+    ++R EE+
Sbjct:   53 GNFHQVRLPLHRTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASRP-PTSVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTSKRIESFKHVRQEEL 162          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.657e-17
Identity = 51/117 (43.59%), Postives = 67/117 (57.26%), Query Frame = 2
Query:  155 GHFHLLKLPMSQTLTNLC-----NKYGPILLLQVGSRPTLVVSSRS-AIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIR 487
            GH  LLK P+ +TL +       N  G ++ L++GSR   VVSS   A EEC  KND++ ANRP +             I APYG+HWRNLRR+  +EIFS  RL     +RT+E+R
Sbjct:   45 GHLRLLKPPIHRTLRSFSETLDHNDGGGVMSLRLGSRLVYVVSSHKVAAEECFGKNDVVLANRPQVIIGKHVGYNNTNMIAAPYGDHWRNLRRLCTIEIFSTHRLNCFLYVRTDEVR 161          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.187e-15
Identity = 44/111 (39.64%), Postives = 65/111 (58.56%), Query Frame = 2
Query:  155 GHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIR 487
            G+ H L     Q+L  L NK+GP++ LQ+GS PTLVVSS     E    +D +F+ RP L +  +       S  APYGE+WR +R++  LE+ SP+R+     +R EE++
Sbjct:   44 GNLHQLGTLPHQSLQYLSNKHGPLMFLQLGSIPTLVVSSAEMAREIFKNHDSVFSGRPSLYAANRLGYGSTVSF-APYGEYWREMRKIMILELLSPKRVQSFEAVRFEEVK 153          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 2.924e-14
Identity = 49/146 (33.56%), Postives = 81/146 (55.48%), Query Frame = 2
Query:   62 VSILLIVYQHIRRNKIQ-PKNXXXXXXXXXXXGHFHLLKLPMS--QTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIG-APYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIR 487
            +S++ +++   R +K+   K            GH  L++   +  +TL  L +KYGPI  +++G+   LV+S+    +EC TKNDI+ ++RP  P   +        IG APYG +WR LR++  LEI S RR+ L ++IR  E++
Sbjct:   14 ISLISLLFFLFRFSKVSHTKEPPIISGSWPLLGHLPLMRNTQTPHKTLGALVDKYGPIFTIKLGATNALVLSNWELAKECFTKNDIVVSSRP-KPVAVELMSYNQAFIGWAPYGAYWRQLRKIVTLEILSNRRIELLSHIRVSEVQ 158          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.819e-14
Identity = 40/110 (36.36%), Postives = 64/110 (58.18%), Query Frame = 2
Query:  155 GHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEI 484
            G+ HLL     + L  L  +YGP++ L++G+ PT+VVSS  A  E L  +D+   +RP  P   +    +     APYGE+WR +R+++ALE+ S RR+  +   R +E+
Sbjct:   66 GNLHLLGPLPHKNLRELARRYGPVMQLRLGTVPTVVVSSAEAAREVLKVHDVDCCSRPASPGPKRLSYDLKNVGFAPYGEYWREMRKLFALELLSMRRVKAACYAREQEM 175          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 3.819e-14
Identity = 48/145 (33.10%), Postives = 73/145 (50.34%), Query Frame = 2
Query:   59 LVSILLIVYQ-HIRRNKIQPKNXXXXXXXXXXXGHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEIRF 490
            LVS+L IV    +++NK    N           G+ H L     +    L  KYGP++ L++GS P +V+SS  A E  L  ND+   +RP     G+          APYGE+WR +R++  +E+FS +++     IR EE+ F
Sbjct:    9 LVSLLTIVSSIFLKQNKTSKFNLPPSPSSLPIIGNLHHLAGLPHRCFHKLSIKYGPLVFLRLGSVPVVVISSSEAAEAVLKTNDLECCSRPKTVGSGKLSYGFKDITFAPYGEYWREVRKLAVIELFSSKKVQSFRYIREEEVDF 153          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.515e-14
Identity = 49/149 (32.89%), Postives = 77/149 (51.68%), Query Frame = 2
Query:   50 LGLLVSILLIVYQHIRRNKIQPKNXXXXXXXXXXXGHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIG----APYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEI 484
            L L++ I ++ +  I++ K +  N           G+ H L     ++L +L N+YGP++LL+ G  P LVVSS     + L   D +FA+RP    R +  EKIF        APYGE+WR ++ V  L + + + +    N+R EEI
Sbjct:   10 LSLIIFITILFF--IKQKKGKKSNTPASPPRLPLIGNLHQLGRHPHRSLCSLSNRYGPLMLLRFGLVPVLVVSSADVARDILKTYDRVFASRP----RSKIFEKIFYEARDVALAPYGEYWRQMKSVCVLHLLTNKMVRSFRNVRQEEI 152          
BLAST of CX288573 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.515e-14
Identity = 46/149 (30.87%), Postives = 77/149 (51.68%), Query Frame = 2
Query:   38 ALHYLGLLVSILLIVYQHIRRNKIQPKNXXXXXXXXXXXGHFHLLKLPMSQTLTNLCNKYGPILLLQVGSRPTLVVSSRSAIEECLTKNDIIFANRPLLPSRGQEKEKIFTSIGAPYGEHWRNLRRVYALEIFSPRRLLLSANIRTEEI 484
            +L +L + ++  L+     R  K    N           G+ H L     ++L +L N+ GP++LL +G  PTL+VS+    EE L  +D+IFA+RP   +  +          +PYGE+WR +R++  LE+ S +R+    +IR EE+
Sbjct:    6 SLLFLAIALTFFLLKLNEKREKK---PNLPPSPPNLPIIGNLHQLGNLPHRSLRSLANELGPLILLHLGHIPTLIVSTAEIAEEILKTHDLIFASRPSTTAARRIFYDCTDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEV 151          
The following BLAST results are available for this feature:
BLAST of CX288573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
C81F1_ARATH5.150e-1937.41Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C81E1_GLYEC5.150e-1937.75Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C75A1_PINTA2.556e-1843.24Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C81D1_ARATH1.657e-1743.59Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
C71A9_SOYBN1.187e-1539.64Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C82A1_PEA2.924e-1433.56Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C71E1_SORBI3.819e-1436.364-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71B2_ARATH3.819e-1433.10Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71AM_ARATH6.515e-1432.89Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C71A1_PERAE6.515e-1430.87Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]

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Properties
Property NameValue
Genbank descriptionC02001H09SK IF1 Citrus clementina cDNA clone C02001H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288573 ID=CX288573; Name=CX288573; organism=Citrus clementina; type=EST; length=490bp
CGGCACGAGGGCGGAAGAAAAAGAGTCCGCCATGGATGCTCTGCACTATC
TTGGCTTGTTAGTTTCCATTCTTCTCATCGTCTATCAACATATCCGACGA
AACAAAATTCAACCCAAAAATCTACCCCCAAGCCCTCCCAGTCTTCCAAT
CATAGGTCATTTCCACCTCTTAAAATTGCCCATGTCCCAGACACTGACCA
ATCTCTGCAACAAGTATGGTCCTATATTACTGCTTCAAGTAGGCTCACGC
CCCACACTAGTAGTCTCGAGTCGATCGGCTATTGAAGAATGCTTGACAAA
AAATGATATAATCTTCGCCAATCGTCCACTCTTGCCCTCTAGAGGGCAAG
AGAAGGAGAAAATTTTCACAAGCATCGGAGCTCCCTATGGCGAGCATTGG
CGCAACCTCCGCCGAGTCTATGCCCTCGAAATTTTCTCCCCAAGGCGTCT
CCTATTATCTGCAAACATTCGGACGGAAGAAATAAGATTC
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