CX288580

Overview
NameCX288580
Unique NameCX288580
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length416
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288580 vs. ExPASy Swiss-Prot
Match: WAX2_ARATH (Protein WAX2 OS=Arabidopsis thaliana GN=WAX2 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.007e-15
Identity = 53/144 (36.81%), Postives = 80/144 (55.56%), Query Frame = 3
Query:    3 VDGSSLSVAVVINSIPKGTTQVVLRGALTKVAYAIAFALCQKGIQV--VTLREDEHEKLRKSFGAKSECNNLLLSRSYSQ----KIWLVGKGLTEEEQSKAKKGTIFIPFSQFPPNDKKIRKDCMYHLTPAMAVPAAFENVDSC 416
            V G++L+ AV++  IPK   +V L GA +K+  AIA  LC++G++V  +TL  +  +K++K    + + NNL+    Y+     K W+VGK LT  EQS A  GT F  F    P   K R++C Y    AM +P   E + +C
Sbjct:  435 VHGNTLTAAVILYEIPKDVNEVFLTGATSKLGRAIALYLCRRGVRVLMLTLSMERFQKIQKEAPVEFQ-NNLVQVTKYNAAQHCKTWIVGKWLTPREQSWAPAGTHFHQF--VVPPILKFRRNCTYGDLAAMKLPKDVEGLGTC 575          
The following BLAST results are available for this feature:
BLAST of CX288580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WAX2_ARATH1.007e-1536.81Protein WAX2 OS=Arabidopsis thaliana GN=WAX2 PE=1 ... [more]
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Properties
Property NameValue
Genbank descriptionC02002A05SK IF1 Citrus clementina cDNA clone C02002A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288580 ID=CX288580; Name=CX288580; organism=Citrus clementina; type=EST; length=416bp
TAGTGGATGGGAGTAGCTTATCAGTGGCAGTAGTGATAAACAGCATACCA
AAGGGAACAACACAAGTGGTCCTTAGAGGCGCTCTCACAAAGGTCGCTTA
TGCCATTGCCTTTGCCTTATGCCAAAAGGGCATCCAGGTTGTAACATTAC
GTGAGGATGAGCACGAGAAGCTTAGAAAATCATTTGGGGCCAAATCTGAA
TGTAATAATTTGCTTCTCTCGAGAAGCTACTCCCAAAAGATATGGTTGGT
GGGAAAAGGGCTGACTGAAGAAGAACAATCCAAGGCTAAAAAGGGAACAA
TCTTCATTCCTTTCTCACAGTTTCCACCAAATGATAAGAAAATACGTAAA
GACTGTATGTACCATCTCACTCCAGCAATGGCCGTTCCTGCTGCTTTTGA
GAATGTGGACTCGTGC
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