CX288589

Overview
NameCX288589
Unique NameCX288589
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length446
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5799 contig Ccv1_Contig5799:884..1329. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL44_ARATH (Beta-glucosidase 44 OS=Arabidopsis thaliana GN=BGLU44 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 3.537e-68
Identity = 118/149 (79.19%), Postives = 129/149 (86.58%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPH-LKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            R+GILLDFVWYEPLTRSKADN AA RARDFH+GWFIHP+VYGEYPKTMQNIV  RLPKFT++EVKMVKGSIDFVGINQYT YYM +PH   +PK +GY QDWN  F + K G PIGPRA S WLYNVPWGMYKALMY+KE YGNPT+IL
Sbjct:  269 RVGILLDFVWYEPLTRSKADNLAAQRARDFHIGWFIHPLVYGEYPKTMQNIVKERLPKFTEKEVKMVKGSIDFVGINQYTTYYMSEPHPTTKPKDLGYQQDWNVEFGFAKLGKPIGPRAYSSWLYNVPWGMYKALMYMKERYGNPTMIL 417          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL43_ARATH (Beta-glucosidase 43 OS=Arabidopsis thaliana GN=BGLU43 PE=2 SV=2)

HSP 1 Score: 251.521 bits (641), Expect = 1.138e-66
Identity = 116/149 (77.85%), Postives = 128/149 (85.91%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLK-QPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            R+GILLDFVW+EPLT S+ADN AA RARDFHVGWFIHPIVYGEYP T+QNIV  RLPKFT+EEVKMVKGSIDFVGINQYT Y+M DP +   PK +GY QDWN  F + KNG PIGPRA+S WLYNVPWGMYKALMYI+E YGNPT+IL
Sbjct:  258 RVGILLDFVWFEPLTSSQADNDAAQRARDFHVGWFIHPIVYGEYPNTLQNIVKERLPKFTEEEVKMVKGSIDFVGINQYTTYFMSDPKISTTPKDLGYQQDWNVTFNFAKNGTPIGPRAHSEWLYNVPWGMYKALMYIEERYGNPTMIL 406          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL01_ORYSJ (Beta-glucosidase 1 OS=Oryza sativa subsp. japonica GN=BGLU1 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 1.821e-56
Identity = 100/148 (67.57%), Postives = 116/148 (78.38%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IGILLDFVWYE LT S AD  AA R+RDFHVGWF+HPI+YGEYPK++Q IV  RLPKFT +EV MVKGSID+VGINQYTAYY+ D          Y  DW+A   YE++GVPIGPRANS WLY VPWG+YKA+ Y+KE YGNPT+ L
Sbjct:  275 KIGILLDFVWYEGLTNSTADQAAAQRSRDFHVGWFLHPIIYGEYPKSLQVIVKERLPKFTADEVHMVKGSIDYVGINQYTAYYVRDQQPNATTLPSYSSDWHAAPIYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMFL 422          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL26_ORYSJ (Beta-glucosidase 26 OS=Oryza sativa subsp. japonica GN=BGLU26 PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 9.350e-53
Identity = 93/148 (62.84%), Postives = 113/148 (76.35%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            RIGILLDFVWYEP + S AD  AA RARDFH+GWF+ PI++G YP +M  IV +R+P F+ EE +MVK SID+VGIN YT++YM DP         Y  DW+ GFAYE+NGVPIG +ANSYWLY VPWG+ KA+ Y+KE YGNPT+IL
Sbjct:  267 RIGILLDFVWYEPFSDSNADRAAAQRARDFHLGWFLDPIIHGRYPYSMLEIVKDRMPTFSDEESRMVKDSIDYVGINHYTSFYMKDPGPWNLTPTSYQDDWHVGFAYERNGVPIGAQANSYWLYIVPWGINKAVTYVKETYGNPTMIL 414          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL08_ORYSJ (Beta-glucosidase 8 OS=Oryza sativa subsp. japonica GN=BGLU8 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 4.802e-49
Identity = 88/148 (59.46%), Postives = 107/148 (72.30%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IGI+LDF WYEPLT S  D  AA RARDFHVGWF+ P++ G+YPK M++IV  RLP FT E+ K+VKGS D+ GINQYTA YM D    Q     Y  DW+  F +++NGVPIG +ANS WLY VP GMY A+ YIKE Y NPT+I+
Sbjct:  272 KIGIVLDFNWYEPLTNSTEDQAAAQRARDFHVGWFLDPLINGQYPKNMRDIVKERLPTFTPEQAKLVKGSADYFGINQYTANYMADQPAPQQAATSYSSDWHVSFIFQRNGVPIGQQANSNWLYIVPTGMYGAVNYIKEKYNNPTIII 419          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL07_ORYSJ (Beta-glucosidase 7 OS=Oryza sativa subsp. japonica GN=BGLU7 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 2.383e-48
Identity = 82/148 (55.41%), Postives = 107/148 (72.30%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            ++GI+LDF WYE L+ S  D  AA RARDFH+GW++ P++ G YP+ MQ++V +RLPKFT E+ ++VKGS D++GINQYTA YM    L Q     Y  DW   + + KNG PIGP+ANS WLY VPWGMY  + YIK+ YGNPTV++
Sbjct:  265 KVGIVLDFNWYEALSNSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGINQYTASYMKGQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGCVNYIKQKYGNPTVVI 412          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL38_ORYSJ (Beta-glucosidase 38 OS=Oryza sativa subsp. japonica GN=BGLU38 PE=2 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 1.545e-47
Identity = 82/148 (55.41%), Postives = 109/148 (73.65%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IGILLDFVWYEPLT  + D+ AA RAR+F +GW++HPI YG YP+TMQN V  RLP FT+E+ +M+KGS D++ IN YT YY+   H      + Y  DW+   +YE+NGVPIG +A S WLY VPWG+YKA+M++KE Y +P +I+
Sbjct:  253 KIGILLDFVWYEPLTDKEEDHAAAHRAREFTLGWYLHPITYGHYPETMQNAVKERLPNFTREQSEMIKGSADYIAINHYTTYYV--SHHVNKTSISYLNDWDVKISYERNGVPIGKQAYSNWLYVVPWGIYKAVMHVKEKYKDPIIII 398          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL12_ORYSJ (Beta-glucosidase 12 OS=Oryza sativa subsp. japonica GN=BGLU12 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 4.662e-36
Identity = 71/148 (47.97%), Postives = 98/148 (66.22%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IGI L   W+ P +RSK+++ AA RA DF  GWF+ P++ G+YP +M+ +VGNRLP+FTKE+ K+VKG+ DF+G+N YTA Y  +          Y  D  A     +NG+PIGP+A S WLY  P G    L+Y+KE+YGNPTV +
Sbjct:  268 KIGITLVSHWFVPFSRSKSNDDAAKRAIDFMFGWFMDPLIRGDYPLSMRGLVGNRLPQFTKEQSKLVKGAFDFIGLNYYTANYADNLPPSNGLNNSYTTDSRANLTGVRNGIPIGPQAASPWLYVYPQGFRDLLLYVKENYGNPTVYI 415          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL11_ORYSJ (Beta-glucosidase 11 OS=Oryza sativa subsp. japonica GN=BGLU11 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 4.662e-36
Identity = 66/148 (44.59%), Postives = 103/148 (69.59%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            +IGI+L+  W+ PL++SK+ + AA RA DF +GWF+ P++ G+YP +M+ +VGNRLP+F+KE+  MVKG+ DF+G+N YT+ Y  +          Y  D +A     +NG+PIGP+A S+W +  P G+ + L+Y+KE+YGNPT+ +
Sbjct:  268 KIGIILNADWFVPLSQSKSSSDAARRALDFMLGWFMDPLIRGDYPLSMRELVGNRLPEFSKEQSGMVKGAFDFIGLNYYTSSYADNDPPSHGHNNSYNTDAHAKITGSRNGIPIGPQAASFWFHIYPEGICEMLLYVKENYGNPTIYI 415          
BLAST of CX288589 vs. ExPASy Swiss-Prot
Match: BGL10_ORYSJ (Beta-glucosidase 10 OS=Oryza sativa subsp. japonica GN=BGLU10 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 4.662e-36
Identity = 66/148 (44.59%), Postives = 101/148 (68.24%), Query Frame = 1
Query:    1 RIGILLDFVWYEPLTRSKADNYAAXRARDFHVGWFIHPIVYGEYPKTMQNIVGNRLPKFTKEEVKMVKGSIDFVGINQYTAYYMYDPHLKQPKQVGYXQDWNAGFAYEKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVIL 444
            RIGI+L+  W+ P ++SK+ N AA R  DF +GWF+ P++ G+YP +M+ +VGNRLP+F+KE+ +MVKG+ DF+G+N Y + Y  +          Y  D +A     +NG+PIGP+A S+W Y  P G+ + L++IKE+YGNPT+ +
Sbjct:  291 RIGIILNSEWFVPFSQSKSSNDAARRVLDFMLGWFMDPLIRGDYPLSMRELVGNRLPEFSKEQSEMVKGAFDFIGLNYYASSYADNDPPSYGHNNSYNTDSHAKITGSRNGIPIGPQAASFWFYIYPEGLRELLLHIKENYGNPTIYI 438          
The following BLAST results are available for this feature:
BLAST of CX288589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
BGL44_ARATH3.537e-6879.19Beta-glucosidase 44 OS=Arabidopsis thaliana GN=BGL... [more]
BGL43_ARATH1.138e-6677.85Beta-glucosidase 43 OS=Arabidopsis thaliana GN=BGL... [more]
BGL01_ORYSJ1.821e-5667.57Beta-glucosidase 1 OS=Oryza sativa subsp. japonica... [more]
BGL26_ORYSJ9.350e-5362.84Beta-glucosidase 26 OS=Oryza sativa subsp. japonic... [more]
BGL08_ORYSJ4.802e-4959.46Beta-glucosidase 8 OS=Oryza sativa subsp. japonica... [more]
BGL07_ORYSJ2.383e-4855.41Beta-glucosidase 7 OS=Oryza sativa subsp. japonica... [more]
BGL38_ORYSJ1.545e-4755.41Beta-glucosidase 38 OS=Oryza sativa subsp. japonic... [more]
BGL12_ORYSJ4.662e-3647.97Beta-glucosidase 12 OS=Oryza sativa subsp. japonic... [more]
BGL11_ORYSJ4.662e-3644.59Beta-glucosidase 11 OS=Oryza sativa subsp. japonic... [more]
BGL10_ORYSJ4.662e-3644.59Beta-glucosidase 10 OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionC02002B03SK IF1 Citrus clementina cDNA clone C02002B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288589 ID=CX288589; Name=CX288589; organism=Citrus clementina; type=EST; length=446bp
AGAATCGGAATTCTCTTGGATTTTGTTTGGTATGAACCTCTTACGAGATC
AAAGGCTGACAACTATGCAGCTCANAGAGCAAGAGACTTTCATGTTGGAT
GGTTTATTCATCCTATCGTTTATGGTGAGTACCCAAAAACAATGCAGAAC
ATTGTTGGCAACAGGCTACCCAAGTTCACAAAAGAAGAGGTTAAAATGGT
AAAGGGATCAATAGATTTTGTGGGTATTAACCAGTATACTGCCTACTACA
TGTATGATCCGCATTTGAAACAACCAAAGCAAGTGGGATATCANCAGGAT
TGGAATGCTGGATTTGCTTATGAAAAGAATGGAGTGCCAATTGGTCCAAG
AGCAAATTCTTATTGGCTATACAATGTACCTTGGGGAATGTACAAGGCCT
TAATGTACATAAAAGAGCATTATGGGAACCCTACAGTCATTCTGTC
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