CX288595

Overview
NameCX288595
Unique NameCX288595
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length310
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX288595 vs. ExPASy Swiss-Prot
Match: CNGT2_ARATH (Cytokinin-N-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT76C2 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.810e-18
Identity = 47/93 (50.54%), Postives = 59/93 (63.44%), Query Frame = 2
Query:   32 ISAVVSKTKACSGLIWNSFEDLEQTELTRLHKDFPIPMFPIGPFHKYCLAXXXXXXXQDPSCISWLDKQAAKSVMYVSFGSIVIVNVTEFLEI 310
            + AVV  T   SGLI+ S E+LE+  LT  ++ F +P+F IGPFH Y  A       QD +CI WLD Q  KSV+YVS GS+V +  TEFLEI
Sbjct:  192 LHAVVETTIRSSGLIYMSCEELEKDSLTLSNEIFKVPVFAIGPFHSYFSASSSSLFTQDETCILWLDDQEDKSVIYVSLGSVVNITETEFLEI 284          
BLAST of CX288595 vs. ExPASy Swiss-Prot
Match: CNGT1_ARATH (Cytokinin-N-glucosyltransferase 1 OS=Arabidopsis thaliana GN=UGT76C1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.503e-14
Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = 2
Query:   41 VVSKTKACSGLIWNSFEDLEQTELTRLHKDFPIPMFPIGPFHKYCL-AXXXXXXXQDPSCISWLDKQAAKSVMYVSFGSIVIVNVTEFLEI 310
            ++  TK  SG+I  S ++L+   L   +K F IP+FPIGPFH + + A        D SCI WLD +  +SV+YVS GSI  +N ++FLEI
Sbjct:  201 ILDATKPASGIIVMSCKELDHDSLAESNKVFSIPIFPIGPFHIHDVPASSSSLLEPDQSCIPWLDMRETRSVVYVSLGSIASLNESDFLEI 291          
The following BLAST results are available for this feature:
BLAST of CX288595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
CNGT2_ARATH4.810e-1850.54Cytokinin-N-glucosyltransferase 2 OS=Arabidopsis t... [more]
CNGT1_ARATH5.503e-1443.96Cytokinin-N-glucosyltransferase 1 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionC02002B09SK IF1 Citrus clementina cDNA clone C02002B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288595 ID=CX288595; Name=CX288595; organism=Citrus clementina; type=EST; length=310bp
AACACATGATACAAGGAATTTTCATCAACTGATATCAGCGGTGGTTAGTA
AGACAAAGGCTTGTTCAGGATTGATATGGAACTCTTTTGAGGACCTTGAA
CAAACCGAACTCACAAGATTACACAAGGACTTTCCCATCCCAATGTTCCC
AATAGGCCCATTTCACAAGTACTGTCTAGCTTCTTCAAGTAGCTTACTAT
CTCAAGACCCAAGTTGCATTTCCTGGTTAGACAAACAAGCAGCAAAATCT
GTAATGTATGTGAGTTTTGGAAGTATAGTTATTGTAAATGTGACCGAATT
TTTGGAGATA
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