CX288647

Overview
NameCX288647
Unique NameCX288647
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length559
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14735 contig Ccv1_Contig14735:178..736. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 257.299 bits (656), Expect = 3.691e-68
Identity = 128/179 (71.51%), Postives = 147/179 (82.12%), Query Frame = 2
Query:   17 SDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 553
            SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK AAPN NSARGF VID MKAAVE ACPR VSCADILTIAA+++V L+GGPSW VPLGRRDS  A  ALAN NLP PF TL +LK+SF+NVGL+   DLVALSG HTFG+ QCQF   RLY+F+NTG PDPTL+ T+LQ LR
Sbjct:   57 SDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAAPNANSARGFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLNTTYLQTLR 235          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 1.832e-67
Identity = 128/181 (70.72%), Postives = 146/181 (80.66%), Query Frame = 2
Query:   17 SDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKL 559
            SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF VID MKAAVERACPR VSCAD+LTIAA++SV L+GGPSW VPLGRRDS  A   LAN NLP PF TL +LK+SFRNVGL+   DLVALSG HTFG+ QCQF   RLY+F+NTG PDPTL+ T+LQ LR L
Sbjct:   58 SDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFGKNQCQFILDRLYNFSNTGLPDPTLNTTYLQTLRGL 238          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 253.447 bits (646), Expect = 5.329e-67
Identity = 127/181 (70.17%), Postives = 144/181 (79.56%), Query Frame = 2
Query:   17 SDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKL 559
            SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF VID MKAAVE ACPR VSCAD+LTIAA++SV L+GGPSW VPLGRRDS  A   LAN NLP PF TL +LK SFRNVGLN   DLVALSG HTFG+ QC+F   RLY+F+NTG PDPTL+ T+LQ LR L
Sbjct:   58 SDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGL 238          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 3.454e-66
Identity = 124/179 (69.27%), Postives = 145/179 (81.01%), Query Frame = 2
Query:   17 SDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLR 553
            SD RI  S++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF VID MKAAVERACPR VSCAD+LTIAA++SV L+GGPSW VPLGRRDS  A   LAN NLP PF TL +LK++F+NVGL+   DLVALSGAHTFG+ QC+F   RLY+F+NTG PDPTL+ T+LQ LR
Sbjct:   59 SDPRIAGSILRLHFHDCFVNGCDASILLDNTTSFRTEKDALGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWKVPLGRRDSLQAFLDLANANLPAPFFTLPQLKANFKNVGLDRPSDLVALSGAHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLR 237          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 2.239e-65
Identity = 122/181 (67.40%), Postives = 145/181 (80.11%), Query Frame = 2
Query:   17 SDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKL 559
            +D RI ASL+RLHFHDCFV GCDASILLD++ +  +EK AAPN NS RGF+VID MKAA+ERACPR VSCADI+TIA++ SV LSGGP W VPLGRRDS  A  ALAN  LP PF TL +LK++F +VGLN   DLVALSG HTFG+AQCQF   RLY+FN T +PDP+L+ T+L +LR+L
Sbjct:   57 TDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNKNSVRGFDVIDRMKAAIERACPRTVSCADIITIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQCQFVTPRLYNFNGTNRPDPSLNPTYLVELRRL 237          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 2.239e-65
Identity = 123/180 (68.33%), Postives = 144/180 (80.00%), Query Frame = 2
Query:   17 SDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRK 556
            SD  I AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF V+D +KAAVERACPR VSCAD+LTIAA++SV L+GGPSW VPLGRRDSR A   LAN NLP P  TL ELK++F NVGLN   DLVALSG HTFG+ QC+F   RLY+F+NTG PDPTL+ T+LQ LR+
Sbjct:   37 SDPSIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQ 216          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 2.924e-65
Identity = 122/185 (65.95%), Postives = 142/185 (76.76%), Query Frame = 2
Query:    2 KKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRK 556
            K A  SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N  SARGF+VID MKAAVE+ACP+ VSCAD+L IAA++SV L+GGPSW VP GRRDS      LAN NLPGP  TL  LK  FRNVGL+   DLVALSG HTFG+ QCQF   RLY+F+N+GKPDPTLD ++L  LRK
Sbjct:   47 KTALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNARSARGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNSGKPDPTLDKSYLSTLRK 231          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 8.508e-65
Identity = 121/183 (66.12%), Postives = 142/183 (77.60%), Query Frame = 2
Query:    8 AFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRK 556
            A  SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF+VID MKAAVE+ACP+ VSCAD+L IAA+ SV L+GGPSW VP GRRDS      LAN NLP PF TL++LK  F+NVGL+   DLVALSG HTFG+ QCQF   RLY+F+NTG PDPTLD ++L  LRK
Sbjct:   47 ALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLRK 229          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 2.476e-64
Identity = 124/181 (68.51%), Postives = 141/181 (77.90%), Query Frame = 2
Query:   17 SDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKL 559
            +D RI ASL+RLHFHDCFV GCDASILLD++ +  +EK AAPN NSARGF VID MK ++ERACPR VSCAD+LTIA++ SV LSGGP W VPLGRRDS  A   LAN  LP PF TL +LK +F +VGLN   DLVALSG HTFGRAQCQF   RLY+FN T +PDPTLD T+L QLR L
Sbjct:   57 TDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSARGFGVIDRMKTSLERACPRTVSCADVLTIASQISVLLSGGPWWPVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNRPDPTLDPTYLVQLRAL 237          
BLAST of CX288647 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 4.223e-64
Identity = 119/183 (65.03%), Postives = 140/183 (76.50%), Query Frame = 2
Query:    8 AFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRK 556
            A  SD RI AS++RLHFHDCFV+GCDASILLD+T +  +EK A  N NSARGF+VID MKAA+E+ACPR VSCAD+L IAA+ S+ L+GGPSW VP GRRDS      LAN NLPGP  TL +LK  F+NVGL+   DLVALSG HTFG++QCQF   RLY+F  TG PDPTLD ++L  LRK
Sbjct:   47 ALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKSQCQFIMDRLYNFGETGLPDPTLDKSYLATLRK 229          
The following BLAST results are available for this feature:
BLAST of CX288647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER32_ARATH3.691e-6871.51Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER34_ARATH1.832e-6770.72Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER1A_ARMRU5.329e-6770.17Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER33_ARATH3.454e-6669.27Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER23_ARATH2.239e-6567.40Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER1C_ARMRU2.239e-6568.33Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER2_ARMRU2.924e-6565.95Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER37_ARATH8.508e-6566.12Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER3_ARMRU2.476e-6468.51Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER38_ARATH4.223e-6465.03Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC02002G07SK IF1 Citrus clementina cDNA clone C02002G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288647 ID=CX288647; Name=CX288647; organism=Citrus clementina; type=EST; length=559bp
TAAGAAAGCTTTCTCGTCCGATATCCGGATCGGTGCCAGCCTCATCAGGC
TTCATTTCCATGACTGTTTTGTTGATGGGTGTGATGCATCGATTTTGCTG
GACAGCACTAACACCATAGACAGCGAGAAATTTGCTGCGCCAAATAACAA
TTCGGCGAGGGGTTTTGAAGTTATTGATAACATGAAAGCTGCCGTTGAAA
GGGCATGTCCAAGGGTTGTTTCCTGCGCTGATATTCTTACTATTGCGGCT
GAACGATCCGTTGCTTTGTCAGGGGGTCCGTCATGGGCAGTTCCATTGGG
AAGAAGAGACAGCAGAACGGCAAACAGAGCTCTTGCAAATCAGAATCTTC
CAGGACCATTTGATACTCTTGATGAGCTCAAATCTAGTTTTAGAAATGTT
GGCCTCAATGACAAGCTTGATCTTGTTGCACTCTCCGGAGCACACACGTT
CGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAGATTATACGATTTTAACA
ACACTGGCAAGCCAGACCCAACCCTAGACGCAACCTTCTTACAACAACTG
AGGAAACTA
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