CX288650
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288650 vs. ExPASy Swiss-Prot
Match: FCF1_YEAST (rRNA-processing protein FCF1 OS=Saccharomyces cerevisiae GN=FCF1 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 4.543e-30 Identity = 63/104 (60.58%), Postives = 81/104 (77.88%), Query Frame = 3 Query: 225 ITKRAIKNYKEDVLNPNKKDL-TKE--KMPRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRV 527 + KR + K+ L N++++ TKE ++ RN+P VSSALFF +N A+ PPY+VL+DTNFINFSIQ K+D+ +GMMDCL AKC P ITDCVMAELEKLG KYR+ Sbjct: 12 LVKRTLNTKKDQRLKKNQENIKTKEDPELTRNIPQVSSALFFQYNQAIKPPYQVLIDTNFINFSIQKKVDIVRGMMDCLLAKCNPLITDCVMAELEKLGPKYRI 115
BLAST of CX288650 vs. ExPASy Swiss-Prot
Match: FCF1_PONAB (rRNA-processing protein FCF1 homolog OS=Pongo abelii GN=FCF1 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 8.568e-29 Identity = 62/94 (65.96%), Postives = 70/94 (74.47%), Query Frame = 3 Query: 252 KEDVLNPNKKDLTKEKM--PRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRV 527 ++D L P KK+ R VP S LFF +NT LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC PCITDCVMAE+EKLGQKYRV Sbjct: 26 EKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYNTQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRV 119
BLAST of CX288650 vs. ExPASy Swiss-Prot
Match: FCF1_HUMAN (rRNA-processing protein FCF1 homolog OS=Homo sapiens GN=FCF1 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 8.568e-29 Identity = 62/94 (65.96%), Postives = 70/94 (74.47%), Query Frame = 3 Query: 252 KEDVLNPNKKDLTKEKM--PRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRV 527 ++D L P KK+ R VP S LFF +NT LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC PCITDCVMAE+EKLGQKYRV Sbjct: 26 EKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYNTQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRV 119
BLAST of CX288650 vs. ExPASy Swiss-Prot
Match: FCF1_BOVIN (rRNA-processing protein FCF1 homolog OS=Bos taurus GN=FCF1 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 8.568e-29 Identity = 62/94 (65.96%), Postives = 70/94 (74.47%), Query Frame = 3 Query: 252 KEDVLNPNKKDLTKEKM--PRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRV 527 ++D L P KK+ R VP S LFF +NT LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC PCITDCVMAE+EKLGQKYRV Sbjct: 26 EKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYNTQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRV 119
BLAST of CX288650 vs. ExPASy Swiss-Prot
Match: FCF1_MOUSE (rRNA-processing protein FCF1 homolog OS=Mus musculus GN=Fcf1 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 2.493e-28 Identity = 61/94 (64.89%), Postives = 70/94 (74.47%), Query Frame = 3 Query: 252 KEDVLNPNKKDLTKEKM--PRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRV 527 ++D L P KK+ R VP S LFF +NT LGPPY +LVDTNFINFSI+ KLDL + MMDCLYAKC PCITDCVMAE+EKLGQK+RV Sbjct: 26 EKDRLKPKKKEKKDPSALKEREVPQHPSCLFFQYNTQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKFRV 119
BLAST of CX288650 vs. ExPASy Swiss-Prot
Match: FCF1_SCHPO (rRNA-processing protein fcf1 OS=Schizosaccharomyces pombe GN=fcf1 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 9.803e-25 Identity = 59/107 (55.14%), Postives = 74/107 (69.16%), Query Frame = 3 Query: 231 KRAIKNYKEDVLNPNKKDLTKEK--------MPRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRV 527 KR I N K+ L KKD KEK + R +P ++S LFF N +LGPPY V++DTNFINF +Q K+DL +G+M CLYAK PCI+DCVMAELEKLG +YR+ Sbjct: 14 KRVI-NLKDQRLQ--KKDQKKEKEKTTKNGELVREIPQMASNLFFQFNESLGPPYHVIIDTNFINFCLQQKIDLFEGLMTCLYAKTIPCISDCVMAELEKLGIRYRI 117
BLAST of CX288650 vs. ExPASy Swiss-Prot
Match: FCF1_DICDI (rRNA-processing protein FCF1 homolog OS=Dictyostelium discoideum GN=fcf1 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.260e-21 Identity = 46/100 (46.00%), Postives = 69/100 (69.00%), Query Frame = 3 Query: 228 TKRAIKNYKEDVLNPNKKDLTKEKMPRNVPNVSSALFFTHNTALGPPYRVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRV 527 T N ++ + ++D ++K+ + +S +FF++N AL PPY V++DTNFINFSI +KLD+ +MDCLYAKC P I+DCV AE+E+LG K++V Sbjct: 20 TNPNFSNRQKQIQRSKQEDEHRKKLEEIPEDNTSHMFFSYNEALVPPYHVIIDTNFINFSISHKLDIIHSLMDCLYAKCIPYISDCVAAEIERLGSKFKV 119 The following BLAST results are available for this feature:
BLAST of CX288650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288650 ID=CX288650; Name=CX288650; organism=Citrus clementina; type=EST; length=527bpback to top |